RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 GUCY2CP25092 1073 aa7.31□□□□□ -1.24
CDH1-207ENST00000564745 SLBPQ14493 270 aaKnown RBP eCLIP7.31□□□□□ -1.24
CDH1-207ENST00000564745 LRRFIP1Q32MZ4 808 aaKnown RBP7.31□□□□□ -1.24
CDH1-207ENST00000564745 ANKRD34AQ69YU3 496 aa7.31□□□□□ -1.24
CDH1-207ENST00000564745 CDPF1Q6NVV7 123 aa7.31□□□□□ -1.24
CDH1-207ENST00000564745 NLRC3Q7RTR2 1065 aa7.31□□□□□ -1.24
CDH1-207ENST00000564745 MCATQ8IVS2 390 aaKnown RBP7.31□□□□□ -1.24
CDH1-207ENST00000564745 FAM13CQ8NE31 585 aa7.31□□□□□ -1.24
CDH1-207ENST00000564745 WFDC12Q8WWY7 111 aa7.31□□□□□ -1.24
CDH1-207ENST00000564745 CNNM2Q9H8M5 875 aa7.31□□□□□ -1.24
CDH1-207ENST00000564745 PIDD1Q9HB75 910 aa7.31□□□□□ -1.24
CDH1-207ENST00000564745 CDK11AQ9UQ88 783 aaPredicted RBP7.31□□□□□ -1.24
CDH1-207ENST00000564745 LTBP3Q9NS15 1303 aa7.3□□□□□ -1.24
CDH1-207ENST00000564745 CASP7P55210 303 aa7.3□□□□□ -1.24
CDH1-207ENST00000564745 CDCP2Q5VXM1 449 aa7.3□□□□□ -1.24
CDH1-207ENST00000564745 UNC5AQ6ZN44 842 aa7.3□□□□□ -1.24
CDH1-207ENST00000564745 Q6ZS46 218 aa7.3□□□□□ -1.24
CDH1-207ENST00000564745 HID1Q8IV36 788 aa7.3□□□□□ -1.24
CDH1-207ENST00000564745 ZNF507Q8TCN5 953 aa7.3□□□□□ -1.24
CDH1-207ENST00000564745 TM9SF2Q99805 663 aa7.3□□□□□ -1.24
CDH1-207ENST00000564745 LGR6Q9HBX8 967 aa7.3□□□□□ -1.24
CDH1-207ENST00000564745 SIRPGQ9P1W8 387 aa7.3□□□□□ -1.24
CDH1-207ENST00000564745 PCDHB10Q9UN67 800 aa7.3□□□□□ -1.24
CDH1-207ENST00000564745 RAB6AP20340 208 aa7.29□□□□□ -1.24
CDH1-207ENST00000564745 KCNMA1Q12791 1236 aa7.29□□□□□ -1.24
CDH1-207ENST00000564745 MLECQ14165 292 aa7.29□□□□□ -1.24
CDH1-207ENST00000564745 RASA3Q14644 834 aa7.29□□□□□ -1.24
CDH1-207ENST00000564745 MBTPS1Q14703 1052 aa7.29□□□□□ -1.24
CDH1-207ENST00000564745 DDR2Q16832 855 aa7.29□□□□□ -1.24
CDH1-207ENST00000564745 SGO2Q562F6 1265 aa7.29□□□□□ -1.24
CDH1-207ENST00000564745 PRAMEF13Q5VWM6 474 aa7.29□□□□□ -1.24
CDH1-207ENST00000564745 MRPL41Q8IXM3 137 aaKnown RBP7.29□□□□□ -1.24
CDH1-207ENST00000564745 SMYD4Q8IYR2 804 aaPredicted RBP7.29□□□□□ -1.24
CDH1-207ENST00000564745 XAGE3Q8WTP9 111 aa7.29□□□□□ -1.24
CDH1-207ENST00000564745 FBLIM1Q8WUP2 373 aa7.29□□□□□ -1.24
CDH1-207ENST00000564745 SCARF2Q96GP6 870 aaPredicted RBP7.29□□□□□ -1.24
CDH1-207ENST00000564745 MEGF10Q96KG7 1140 aa7.29□□□□□ -1.24
CDH1-207ENST00000564745 KIF2CQ99661 725 aa7.29□□□□□ -1.24
CDH1-207ENST00000564745 SNTG2Q9NY99 539 aa7.29□□□□□ -1.24
CDH1-207ENST00000564745 C9orf172C9J069 976 aa7.28□□□□□ -1.24
CDH1-207ENST00000564745 TNFRSF10CO14798 259 aa7.28□□□□□ -1.24
CDH1-207ENST00000564745 U2SURPO15042 1029 aaKnown RBP7.28□□□□□ -1.24
CDH1-207ENST00000564745 DYNC1LI2O43237 492 aaPredicted RBP7.28□□□□□ -1.24
CDH1-207ENST00000564745 SART1O43290 800 aaKnown RBP7.28□□□□□ -1.24
CDH1-207ENST00000564745 GJB6O95452 261 aa7.28□□□□□ -1.24
CDH1-207ENST00000564745 APBA3O96018 575 aa7.28□□□□□ -1.24
CDH1-207ENST00000564745 RAG1P15918 1043 aa7.28□□□□□ -1.24
CDH1-207ENST00000564745 ADGRE1Q14246 886 aa7.28□□□□□ -1.24
CDH1-207ENST00000564745 C6orf15Q6UXA7 325 aaPredicted RBP7.28□□□□□ -1.24
CDH1-207ENST00000564745 CDC37L1Q7L3B6 337 aa7.28□□□□□ -1.24
CDH1-207ENST00000564745 C19orf47Q8N9M1 422 aaKnown RBP7.28□□□□□ -1.24
CDH1-207ENST00000564745 FAM46AQ96IP4 442 aaKnown RBP7.28□□□□□ -1.24
CDH1-207ENST00000564745 SRPK1Q96SB4 655 aaKnown RBP7.28□□□□□ -1.24
CDH1-207ENST00000564745 ACSS3Q9H6R3 686 aa7.28□□□□□ -1.24
CDH1-207ENST00000564745 SSU72Q9NP77 194 aaKnown RBP7.28□□□□□ -1.24
CDH1-207ENST00000564745 GAS2O43903 313 aaKnown RBP7.27□□□□□ -1.25
CDH1-207ENST00000564745 NFICP08651 508 aa7.27□□□□□ -1.25
CDH1-207ENST00000564745 SLC6A19Q695T7 634 aa7.27□□□□□ -1.25
CDH1-207ENST00000564745 MRM1Q6IN84 353 aaKnown RBP7.27□□□□□ -1.25
CDH1-207ENST00000564745 NOP9Q86U38 636 aaKnown RBP7.27□□□□□ -1.25
CDH1-207ENST00000564745 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDH1-207ENST00000564745 SLFN12Q8IYM2 578 aa7.27□□□□□ -1.25
CDH1-207ENST00000564745 ARMC10Q8N2F6 343 aa7.27□□□□□ -1.25
CDH1-207ENST00000564745 TAB3Q8N5C8 712 aaPredicted RBP7.27□□□□□ -1.25
CDH1-207ENST00000564745 BAHD1Q8TBE0 780 aaPredicted RBP7.27□□□□□ -1.25
CDH1-207ENST00000564745 DEPDC7Q96QD5 511 aa7.27□□□□□ -1.25
CDH1-207ENST00000564745 SEMA6CQ9H3T2 930 aa7.27□□□□□ -1.25
CDH1-207ENST00000564745 MAPK8IP1Q9UQF2 711 aa7.27□□□□□ -1.25
CDH1-207ENST00000564745 MSRB2Q9Y3D2 182 aa7.27□□□□□ -1.25
CDH1-207ENST00000564745 DAGLAQ9Y4D2 1042 aa7.27□□□□□ -1.25
CDH1-207ENST00000564745 DDAH1O94760 285 aa7.26□□□□□ -1.25
CDH1-207ENST00000564745 UBOX5O94941 541 aa7.26□□□□□ -1.25
CDH1-207ENST00000564745 CST3P01034 146 aaPredicted RBP7.26□□□□□ -1.25
CDH1-207ENST00000564745 USP11P51784 963 aa7.26□□□□□ -1.25
CDH1-207ENST00000564745 YARSP54577 528 aaKnown RBP7.26□□□□□ -1.25
CDH1-207ENST00000564745 NRG1Q02297 640 aaPredicted RBP7.26□□□□□ -1.25
CDH1-207ENST00000564745 FXNQ16595 210 aa7.26□□□□□ -1.25
CDH1-207ENST00000564745 INTS3Q68E01 1043 aaKnown RBP7.26□□□□□ -1.25
CDH1-207ENST00000564745 ZNF746Q6NUN9 644 aaPredicted RBP7.26□□□□□ -1.25
CDH1-207ENST00000564745 JAZF1Q86VZ6 243 aa7.26□□□□□ -1.25
CDH1-207ENST00000564745 TMEM192Q8IY95 271 aa7.26□□□□□ -1.25
CDH1-207ENST00000564745 PHACTR4Q8IZ21 702 aa7.26□□□□□ -1.25
CDH1-207ENST00000564745 FAM177A1Q8N128 213 aaPredicted RBP7.26□□□□□ -1.25
CDH1-207ENST00000564745 MKL1Q969V6 931 aa7.26□□□□□ -1.25
CDH1-207ENST00000564745 NACC1Q96RE7 527 aa7.26□□□□□ -1.25
CDH1-207ENST00000564745 CEP41Q9BYV8 373 aa7.26□□□□□ -1.25
CDH1-207ENST00000564745 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.25□□□□□ -1.25
CDH1-207ENST00000564745 KRBA1A5PL33 1030 aa7.25□□□□□ -1.25
CDH1-207ENST00000564745 CHRNA4P43681 627 aa7.25□□□□□ -1.25
CDH1-207ENST00000564745 GSK3AP49840 483 aa7.25□□□□□ -1.25
CDH1-207ENST00000564745 NFE2L2Q16236 605 aa7.25□□□□□ -1.25
CDH1-207ENST00000564745 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.25□□□□□ -1.25
CDH1-207ENST00000564745 ARMCX6Q7L4S7 300 aa7.25□□□□□ -1.25
CDH1-207ENST00000564745 FAM178BQ8IXR5 827 aa7.25□□□□□ -1.25
CDH1-207ENST00000564745 DZIP1LQ8IYY4 767 aaKnown RBP7.25□□□□□ -1.25
CDH1-207ENST00000564745 RIN3Q8TB24 985 aa7.25□□□□□ -1.25
CDH1-207ENST00000564745 MRFAP1L1Q96HT8 127 aa7.25□□□□□ -1.25
CDH1-207ENST00000564745 FOXQ1Q9C009 403 aa7.25□□□□□ -1.25
CDH1-207ENST00000564745 FAM86C1Q9NVL1 165 aa7.25□□□□□ -1.25
CDH1-207ENST00000564745 PCOLCE2Q9UKZ9 415 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms