RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 B4E1Z4 1266 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 ZBTB43O43298 467 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 MAP3K7O43318 606 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 TPD52L2O43399 206 aaKnown RBP8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 EVI5O60447 810 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 YEATS4O95619 227 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 PCP11498 1178 aaKnown RBP8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 EN1Q05925 392 aaPredicted RBP8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 PPP2R5BQ15173 497 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 TUSC1Q2TAM9 212 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 SYNE3Q6ZMZ3 975 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 NBPF5PQ86XG9 351 aaPredicted RBP8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 VPS37DQ86XT2 251 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 NLGN1Q8N2Q7 840 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 FAM84BQ96KN1 310 aaPredicted RBP8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 USP28Q96RU2 1077 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 PIF1Q9H611 641 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 ARMT1Q9H993 441 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 ZSWIM5Q9P217 1185 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 ANAPC4Q9UJX5 808 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 CCNL1Q9UK58 526 aaPredicted RBP8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 IQSEC3Q9UPP2 1182 aaPredicted RBP8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 SLC4A4Q9Y6R1 1079 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 BTAF1O14981 1849 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 NID2Q14112 1375 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 CYP7A1P22680 504 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 HMGB2P26583 209 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 TDO2P48775 406 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 CCDC144BQ3MJ40 725 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 LDLRAD1Q5T700 205 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 ADALQ6DHV7 355 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 FAM200AQ8TCP9 573 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 KCNG4Q8TDN1 519 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 TMEM106CQ9BVX2 250 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 LY9Q9HBG7 655 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 TMA7Q9Y2S6 64 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 CHD4Q14839 1912 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 CCDC196A0A1B0GTZ2 297 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 A0A1W2PQ27 194 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 A0A1W2PQ64 194 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 A0A1W2PQD8 194 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 ERICH2A1L162 156 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 CCDC69A6NI79 296 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 IFIT3O14879 490 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 ZNF500O60304 480 aaPredicted RBP8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 NR1I2O75469 434 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 TYRO3Q06418 890 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 NTRK3Q16288 839 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 CRTC2Q53ET0 693 aaPredicted RBP8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 TMEM67Q5HYA8 995 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 EGFLAMQ63HQ2 1017 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 SASS6Q6UVJ0 657 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 BICDL1Q6ZP65 573 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 C3orf67Q6ZVT6 689 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 NOP9Q86U38 636 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 EXOC8Q8IYI6 725 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 LCORLQ8N3X6 602 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 WASF1Q92558 559 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 CELF1Q92879 486 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 AKT1S1Q96B36 256 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 TRPC6Q9Y210 931 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 ZKSCAN5Q9Y2L8 839 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 SLC12A7Q9Y666 1083 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 COL24A1Q17RW2 1714 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 TIAM2Q8IVF5 1701 aa8.41□□□□□ -1.06
HERPUD1-209ENST00000564678 NEDD4P46934 1319 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 STK36Q9NRP7 1315 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 A0A1B0GUL6 1792 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 MAGEB6P1A0A0J9YX57 407 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 KIF3CO14782 793 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 IARSP41252 1262 aaKnown RBP8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 GYG1P46976 350 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 NT5C2P49902 561 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 TRAPPC3LQ5T215 181 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 NFXL1Q6ZNB6 911 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 CCDC73Q6ZRK6 1079 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 CCAR1Q8IX12 1150 aaKnown RBP8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 LINC00301Q8NCQ3 95 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 LRRN4Q8WUT4 740 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 SPACA7Q96KW9 195 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 BRIP1Q9BX63 1249 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 RAI14Q9P0K7 980 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 ABCF2Q9UG63 623 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 ADGRG1Q9Y653 693 aa8.4□□□□□ -1.06
HERPUD1-209ENST00000564678 C4AP0C0L4 1744 aa8.4□□□□□ -1.07
HERPUD1-209ENST00000564678 C4BP0C0L5 1744 aa8.4□□□□□ -1.07
HERPUD1-209ENST00000564678 TLDC2A0PJX2 215 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 PITPNM1O00562 1244 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 PRKAB2O43741 272 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 IFNAR1P17181 557 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 HIBADHP31937 336 aaKnown RBP8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 GUCY1B3Q02153 619 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 KIF23Q02241 960 aaPredicted RBP8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 FAM160A1Q05DH4 1040 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 PPARAQ07869 468 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 CAMK4Q16566 473 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 ENGASEQ8NFI3 743 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 RIOK1Q9BRS2 568 aaKnown RBP8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 ALG1Q9BT22 464 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 MRVI1Q9Y6F6 885 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms