RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 FBRSQ9HAH7 460 aa7.89□□□□□ -1.15
CHD9-212ENST00000564641 ADAMTS6Q9UKP5 1117 aa7.89□□□□□ -1.15
CHD9-212ENST00000564641 GRK4P32298 578 aa7.88□□□□□ -1.15
CHD9-212ENST00000564641 ZP2Q05996 745 aa7.88□□□□□ -1.15
CHD9-212ENST00000564641 SEPT6Q14141 434 aa7.88□□□□□ -1.15
CHD9-212ENST00000564641 NKG7Q16617 165 aa7.88□□□□□ -1.15
CHD9-212ENST00000564641 LETMD1Q6P1Q0 360 aa7.88□□□□□ -1.15
CHD9-212ENST00000564641 TMC4Q7Z404 712 aa7.88□□□□□ -1.15
CHD9-212ENST00000564641 CCDC84Q86UT8 332 aaPredicted RBP7.88□□□□□ -1.15
CHD9-212ENST00000564641 NPAS4Q8IUM7 802 aa7.88□□□□□ -1.15
CHD9-212ENST00000564641 LRRN4CLQ8ND94 238 aa7.88□□□□□ -1.15
CHD9-212ENST00000564641 FLAD1Q8NFF5 587 aa7.88□□□□□ -1.15
CHD9-212ENST00000564641 TMEM40Q8WWA1 233 aa7.88□□□□□ -1.15
CHD9-212ENST00000564641 KIR3DL1P43629 444 aa7.87□□□□□ -1.15
CHD9-212ENST00000564641 RPL6Q02878 288 aaKnown RBP7.87□□□□□ -1.15
CHD9-212ENST00000564641 PRAMEF13Q5VWM6 474 aa7.87□□□□□ -1.15
CHD9-212ENST00000564641 DNAJC14Q6Y2X3 702 aaPredicted RBP7.87□□□□□ -1.15
CHD9-212ENST00000564641 THAP5Q7Z6K1 395 aa7.87□□□□□ -1.15
CHD9-212ENST00000564641 MRPL41Q8IXM3 137 aaKnown RBP7.87□□□□□ -1.15
CHD9-212ENST00000564641 PCDHB5Q9Y5E4 795 aa7.87□□□□□ -1.15
CHD9-212ENST00000564641 MEI1Q5TIA1 1274 aa7.86□□□□□ -1.15
CHD9-212ENST00000564641 SLC6A19Q695T7 634 aa7.86□□□□□ -1.15
CHD9-212ENST00000564641 FAM168AQ92567 244 aa7.86□□□□□ -1.15
CHD9-212ENST00000564641 ADAM30Q9UKF2 790 aa7.86□□□□□ -1.15
CHD9-212ENST00000564641 USP31Q70CQ4 1352 aa7.85□□□□□ -1.15
CHD9-212ENST00000564641 PGRP06401 933 aa7.85□□□□□ -1.15
CHD9-212ENST00000564641 TFE3P19532 575 aaPredicted RBP7.85□□□□□ -1.15
CHD9-212ENST00000564641 MAP3K11Q16584 847 aa7.85□□□□□ -1.15
CHD9-212ENST00000564641 CCDC120Q96HB5 630 aa7.85□□□□□ -1.15
CHD9-212ENST00000564641 CRELD1Q96HD1 420 aa7.85□□□□□ -1.15
CHD9-212ENST00000564641 ETV3P41162 512 aa7.84□□□□□ -1.15
CHD9-212ENST00000564641 CDK8P49336 464 aa7.84□□□□□ -1.15
CHD9-212ENST00000564641 MCATQ8IVS2 390 aaKnown RBP7.84□□□□□ -1.15
CHD9-212ENST00000564641 HSPA12BQ96MM6 686 aa7.84□□□□□ -1.15
CHD9-212ENST00000564641 MRS2Q9HD23 443 aa7.84□□□□□ -1.15
CHD9-212ENST00000564641 SEMA3GQ9NS98 782 aa7.84□□□□□ -1.15
CHD9-212ENST00000564641 RNF19AQ9NV58 838 aa7.84□□□□□ -1.15
CHD9-212ENST00000564641 FAM53CQ9NYF3 392 aa7.84□□□□□ -1.15
CHD9-212ENST00000564641 CAPN6Q9Y6Q1 641 aa7.84□□□□□ -1.15
CHD9-212ENST00000564641 CARMIL2Q6F5E8 1435 aa7.84□□□□□ -1.15
CHD9-212ENST00000564641 SORBS3O60504 671 aa7.83□□□□□ -1.16
CHD9-212ENST00000564641 AFMP43652 599 aa7.83□□□□□ -1.16
CHD9-212ENST00000564641 PWP1Q13610 501 aa7.83□□□□□ -1.16
CHD9-212ENST00000564641 FBXO33Q7Z6M2 555 aa7.83□□□□□ -1.16
CHD9-212ENST00000564641 PIWIL2Q8TC59 973 aaKnown RBP7.83□□□□□ -1.16
CHD9-212ENST00000564641 TMEM87BQ96K49 555 aa7.83□□□□□ -1.16
CHD9-212ENST00000564641 TJP2Q9UDY2 1190 aa7.83□□□□□ -1.16
CHD9-212ENST00000564641 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.83□□□□□ -1.16
CHD9-212ENST00000564641 PRR33A8MZF0 331 aa7.82□□□□□ -1.16
CHD9-212ENST00000564641 FARP2O94887 1054 aaPredicted RBP7.82□□□□□ -1.16
CHD9-212ENST00000564641 BPNT1O95861 308 aa7.82□□□□□ -1.16
CHD9-212ENST00000564641 CDKAL1Q5VV42 579 aa7.82□□□□□ -1.16
CHD9-212ENST00000564641 PHC3Q8NDX5 983 aa7.82□□□□□ -1.16
CHD9-212ENST00000564641 RIN3Q8TB24 985 aa7.82□□□□□ -1.16
CHD9-212ENST00000564641 ST14Q9Y5Y6 855 aa7.82□□□□□ -1.16
CHD9-212ENST00000564641 CBX7O95931 251 aa7.81□□□□□ -1.16
CHD9-212ENST00000564641 C8AP07357 584 aa7.81□□□□□ -1.16
CHD9-212ENST00000564641 LMNB2Q03252 620 aa7.81□□□□□ -1.16
CHD9-212ENST00000564641 ZSWIM9Q86XI8 627 aa7.81□□□□□ -1.16
CHD9-212ENST00000564641 XAGE3Q8WTP9 111 aa7.81□□□□□ -1.16
CHD9-212ENST00000564641 JARID2Q92833 1246 aaPredicted RBP7.81□□□□□ -1.16
CHD9-212ENST00000564641 ATP13A1Q9HD20 1204 aa7.81□□□□□ -1.16
CHD9-212ENST00000564641 PRDM7Q9NQW5 492 aa7.81□□□□□ -1.16
CHD9-212ENST00000564641 CTNND2Q9UQB3 1225 aa7.81□□□□□ -1.16
CHD9-212ENST00000564641 H3BS24 57 aa7.8□□□□□ -1.16
CHD9-212ENST00000564641 CTSHP09668 335 aa7.8□□□□□ -1.16
CHD9-212ENST00000564641 YARSP54577 528 aaKnown RBP7.8□□□□□ -1.16
CHD9-212ENST00000564641 KCNMB1Q16558 191 aa7.8□□□□□ -1.16
CHD9-212ENST00000564641 CCDC27Q2M243 656 aa7.8□□□□□ -1.16
CHD9-212ENST00000564641 TMPRSS7Q7RTY8 843 aa7.8□□□□□ -1.16
CHD9-212ENST00000564641 RELL1Q8IUW5 271 aa7.8□□□□□ -1.16
CHD9-212ENST00000564641 BCL11AQ9H165 835 aa7.8□□□□□ -1.16
CHD9-212ENST00000564641 CARS2Q9HA77 564 aaKnown RBP7.8□□□□□ -1.16
CHD9-212ENST00000564641 TLR6Q9Y2C9 796 aa7.8□□□□□ -1.16
CHD9-212ENST00000564641 CNTNAP4Q9C0A0 1308 aa7.79□□□□□ -1.16
CHD9-212ENST00000564641 GDNFP39905 211 aa7.79□□□□□ -1.16
CHD9-212ENST00000564641 FZD5Q13467 585 aa7.79□□□□□ -1.16
CHD9-212ENST00000564641 CAMK2GQ13555 558 aaPredicted RBP7.79□□□□□ -1.16
CHD9-212ENST00000564641 TMEM201Q5SNT2 666 aa7.79□□□□□ -1.16
CHD9-212ENST00000564641 CDH24Q86UP0 819 aa7.79□□□□□ -1.16
CHD9-212ENST00000564641 GATAD2BQ8WXI9 593 aa7.79□□□□□ -1.16
CHD9-212ENST00000564641 RSRP1Q9BUV0 290 aa7.79□□□□□ -1.16
CHD9-212ENST00000564641 CEP131Q9UPN4 1083 aa7.79□□□□□ -1.16
CHD9-212ENST00000564641 CILPO75339 1184 aa7.78□□□□□ -1.16
CHD9-212ENST00000564641 PKN1Q16512 942 aa7.78□□□□□ -1.16
CHD9-212ENST00000564641 UBE2FQ969M7 185 aa7.78□□□□□ -1.16
CHD9-212ENST00000564641 ACSF2Q96CM8 615 aaPredicted RBP7.78□□□□□ -1.16
CHD9-212ENST00000564641 FAM161BQ96MY7 647 aa7.78□□□□□ -1.16
CHD9-212ENST00000564641 TMEM74Q96NL1 305 aa7.78□□□□□ -1.16
CHD9-212ENST00000564641 SLC38A3Q99624 504 aa7.78□□□□□ -1.16
CHD9-212ENST00000564641 TRIT1Q9H3H1 467 aaKnown RBP7.78□□□□□ -1.16
CHD9-212ENST00000564641 VTI1BQ9UEU0 232 aa7.78□□□□□ -1.16
CHD9-212ENST00000564641 FAM221AA4D161 298 aa7.77□□□□□ -1.17
CHD9-212ENST00000564641 PLCG1P19174 1290 aa7.77□□□□□ -1.17
CHD9-212ENST00000564641 TNK2Q07912 1038 aa7.77□□□□□ -1.17
CHD9-212ENST00000564641 BHLHE22Q8NFJ8 381 aaPredicted RBP7.77□□□□□ -1.17
CHD9-212ENST00000564641 CYB5D2Q8WUJ1 264 aa7.77□□□□□ -1.17
CHD9-212ENST00000564641 DPH2Q9BQC3 489 aaPredicted RBP7.77□□□□□ -1.17
CHD9-212ENST00000564641 PRR36Q9H6K5 1346 aa7.77□□□□□ -1.17
CHD9-212ENST00000564641 LRRC10BA6NIK2 292 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms