RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 RAET1EQ8TD07 263 aa15.35■□□□□ 0.05
HERC2-206ENST00000564519 OTUD7AQ8TE49 926 aaPredicted RBP15.35■□□□□ 0.05
HERC2-206ENST00000564519 CDK5RAP2Q96SN8 1893 aa15.34■□□□□ 0.05
HERC2-206ENST00000564519 MBD4O95243 580 aa15.34■□□□□ 0.05
HERC2-206ENST00000564519 BCRP11274 1271 aa15.34■□□□□ 0.05
HERC2-206ENST00000564519 HMGCS2P54868 508 aa15.34■□□□□ 0.05
HERC2-206ENST00000564519 CRNKL1Q9BZJ0 848 aaKnown RBP15.34■□□□□ 0.05
HERC2-206ENST00000564519 DCP1AQ9NPI6 582 aaPredicted RBP15.34■□□□□ 0.05
HERC2-206ENST00000564519 SERPINB13Q9UIV8 391 aa15.34■□□□□ 0.05
HERC2-206ENST00000564519 ZBTB21Q9ULJ3 1066 aa15.34■□□□□ 0.05
HERC2-206ENST00000564519 AGTPBP1Q9UPW5 1226 aa15.34■□□□□ 0.05
HERC2-206ENST00000564519 FOCADQ5VW36 1801 aa15.33■□□□□ 0.05
HERC2-206ENST00000564519 PHIPQ8WWQ0 1821 aa15.33■□□□□ 0.05
HERC2-206ENST00000564519 ASNSP08243 561 aa15.33■□□□□ 0.04
HERC2-206ENST00000564519 CYP2D6P10635 497 aa15.33■□□□□ 0.04
HERC2-206ENST00000564519 PSMC4P43686 418 aa15.33■□□□□ 0.04
HERC2-206ENST00000564519 UBE3CQ15386 1083 aa15.33■□□□□ 0.04
HERC2-206ENST00000564519 TATDN1Q6P1N9 297 aa15.33■□□□□ 0.04
HERC2-206ENST00000564519 TTC6Q86TZ1 520 aa15.33■□□□□ 0.04
HERC2-206ENST00000564519 WDR18Q9BV38 432 aa15.33■□□□□ 0.04
HERC2-206ENST00000564519 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.33■□□□□ 0.042e-6■■■■■ 27.3
HERC2-206ENST00000564519 EHD4Q9H223 541 aa15.33■□□□□ 0.04
HERC2-206ENST00000564519 AS3MTQ9HBK9 375 aa15.33■□□□□ 0.04
HERC2-206ENST00000564519 MCM9Q9NXL9 1143 aa15.33■□□□□ 0.04
HERC2-206ENST00000564519 BIN2Q9UBW5 565 aaPredicted RBP15.33■□□□□ 0.04
HERC2-206ENST00000564519 SLC45A1Q9Y2W3 748 aa15.33■□□□□ 0.04
HERC2-206ENST00000564519 ZSWIM8A7E2V4 1837 aa15.32■□□□□ 0.04
HERC2-206ENST00000564519 SMIM22K7EJ46 135 aa15.32■□□□□ 0.04
HERC2-206ENST00000564519 GH2P01242 217 aa15.32■□□□□ 0.04
HERC2-206ENST00000564519 POLR3DP05423 398 aaPredicted RBP15.32■□□□□ 0.04
HERC2-206ENST00000564519 SHMT1P34896 483 aa15.32■□□□□ 0.04
HERC2-206ENST00000564519 BACE1P56817 501 aa15.32■□□□□ 0.04
HERC2-206ENST00000564519 GABPAQ06546 454 aa15.32■□□□□ 0.04
HERC2-206ENST00000564519 MTMR2Q13614 643 aa15.32■□□□□ 0.04
HERC2-206ENST00000564519 SH3D19Q5HYK7 790 aa15.32■□□□□ 0.04
HERC2-206ENST00000564519 PROCA1Q8NCQ7 364 aaPredicted RBP15.32■□□□□ 0.04
HERC2-206ENST00000564519 NKX2-3Q8TAU0 364 aa15.32■□□□□ 0.04
HERC2-206ENST00000564519 TRIM47Q96LD4 638 aa15.32■□□□□ 0.04
HERC2-206ENST00000564519 TBC1D2Q9BYX2 928 aa15.32■□□□□ 0.04
HERC2-206ENST00000564519 PUS7LQ9H0K6 701 aaKnown RBP15.32■□□□□ 0.04
HERC2-206ENST00000564519 BRCA2P51587 3418 aa15.31■□□□□ 0.04
HERC2-206ENST00000564519 UBXN2AP68543 259 aa15.31■□□□□ 0.04
HERC2-206ENST00000564519 DPF3Q92784 378 aa15.31■□□□□ 0.04
HERC2-206ENST00000564519 SRRDQ9UH36 339 aa15.31■□□□□ 0.04
HERC2-206ENST00000564519 DDX60LQ5H9U9 1706 aaKnown RBP15.31■□□□□ 0.04
HERC2-206ENST00000564519 CYP2D7A0A087X1C5 515 aa15.3■□□□□ 0.04
HERC2-206ENST00000564519 CERKLQ49MI3 558 aaPredicted RBP15.3■□□□□ 0.04
HERC2-206ENST00000564519 MYPNQ86TC9 1320 aa15.3■□□□□ 0.04
HERC2-206ENST00000564519 KBTBD3Q8NAB2 608 aa15.3■□□□□ 0.04
HERC2-206ENST00000564519 SLC44A5Q8NCS7 719 aa15.3■□□□□ 0.04
HERC2-206ENST00000564519 PI4K2BQ8TCG2 481 aa15.3■□□□□ 0.04
HERC2-206ENST00000564519 SMCR8Q8TEV9 937 aaPredicted RBP15.3■□□□□ 0.04
HERC2-206ENST00000564519 DYNLL2Q96FJ2 89 aa15.3■□□□□ 0.04
HERC2-206ENST00000564519 GPATCH3Q96I76 525 aa15.3■□□□□ 0.04
HERC2-206ENST00000564519 GINM1Q9NU53 330 aa15.3■□□□□ 0.04
HERC2-206ENST00000564519 USP17L10C9JJH3 530 aa15.29■□□□□ 0.04
HERC2-206ENST00000564519 OSBPP22059 807 aa15.29■□□□□ 0.04
HERC2-206ENST00000564519 GRK4P32298 578 aa15.29■□□□□ 0.04
HERC2-206ENST00000564519 GUCY1A2P33402 732 aa15.29■□□□□ 0.04
HERC2-206ENST00000564519 FCGRTP55899 365 aa15.29■□□□□ 0.04
HERC2-206ENST00000564519 HDAC1Q13547 482 aaPredicted RBP15.29■□□□□ 0.04
HERC2-206ENST00000564519 ABCB5Q2M3G0 1257 aa15.29■□□□□ 0.04
HERC2-206ENST00000564519 ANKRD45Q5TZF3 282 aa15.29■□□□□ 0.04
HERC2-206ENST00000564519 ZSCAN25Q6NSZ9 544 aa15.29■□□□□ 0.04
HERC2-206ENST00000564519 ASCC2Q9H1I8 757 aaPredicted RBP15.29■□□□□ 0.04
HERC2-206ENST00000564519 EMILIN3Q9NT22 766 aa15.29■□□□□ 0.04
HERC2-206ENST00000564519 COLQQ9Y215 455 aaPredicted RBP15.29■□□□□ 0.04
HERC2-206ENST00000564519 SLC4A4Q9Y6R1 1079 aa15.29■□□□□ 0.04
HERC2-206ENST00000564519 ATAD5Q96QE3 1844 aa15.29■□□□□ 0.04
HERC2-206ENST00000564519 TTC41PQ6P2S7 1318 aa15.28■□□□□ 0.04
HERC2-206ENST00000564519 SALL3Q9BXA9 1300 aa15.28■□□□□ 0.04
HERC2-206ENST00000564519 PTPRFP10586 1907 aa15.28■□□□□ 0.04
HERC2-206ENST00000564519 H0YGN5 161 aa15.28■□□□□ 0.04
HERC2-206ENST00000564519 RAB3GAP1Q15042 981 aa15.28■□□□□ 0.04
HERC2-206ENST00000564519 ANKRD13CQ8N6S4 541 aa15.28■□□□□ 0.04
HERC2-206ENST00000564519 EXOC6Q8TAG9 804 aa15.28■□□□□ 0.04
HERC2-206ENST00000564519 ACER1Q8TDN7 264 aa15.28■□□□□ 0.04
HERC2-206ENST00000564519 OSBP2Q969R2 916 aa15.28■□□□□ 0.04
HERC2-206ENST00000564519 ATP8A2Q9NTI2 1148 aa15.28■□□□□ 0.04
HERC2-206ENST00000564519 TMOD4Q9NZQ9 345 aa15.28■□□□□ 0.04
HERC2-206ENST00000564519 LOC285556D6RIA3 1793 aa15.27■□□□□ 0.04
HERC2-206ENST00000564519 C19orf81C9J6K1 198 aa15.27■□□□□ 0.04
HERC2-206ENST00000564519 RNF113AO15541 343 aaKnown RBP15.27■□□□□ 0.04
HERC2-206ENST00000564519 PEX10O60683 326 aa15.27■□□□□ 0.04
HERC2-206ENST00000564519 MX1P20591 662 aa15.27■□□□□ 0.04
HERC2-206ENST00000564519 FXR1P51114 621 aaKnown RBP eCLIP15.27■□□□□ 0.04
HERC2-206ENST00000564519 PRKCZQ05513 592 aa15.27■□□□□ 0.04
HERC2-206ENST00000564519 MTFR1Q15390 333 aa15.27■□□□□ 0.04
HERC2-206ENST00000564519 ZYXQ15942 572 aaKnown RBP15.27■□□□□ 0.04
HERC2-206ENST00000564519 STRBPQ96SI9 672 aaKnown RBP15.27■□□□□ 0.04
HERC2-206ENST00000564519 HTATIP2Q9BUP3 242 aa15.27■□□□□ 0.04
HERC2-206ENST00000564519 RNF208Q9H0X6 261 aa15.27■□□□□ 0.04
HERC2-206ENST00000564519 PNMA3Q9UL41 463 aa15.27■□□□□ 0.04
HERC2-206ENST00000564519 GABRQQ9UN88 632 aa15.27■□□□□ 0.04
HERC2-206ENST00000564519 MYH1P12882 1939 aa15.27■□□□□ 0.03
HERC2-206ENST00000564519 NAV1Q8NEY1 1877 aa15.27■□□□□ 0.03
HERC2-206ENST00000564519 USP17L12C9JPN9 530 aa15.26■□□□□ 0.03
HERC2-206ENST00000564519 USP17L21D6R901 530 aa15.26■□□□□ 0.03
HERC2-206ENST00000564519 M0R2C6 588 aa15.26■□□□□ 0.03
HERC2-206ENST00000564519 PABPC4Q13310 644 aaKnown RBP eCLIP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms