RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 PLCD1P51178 756 aa24.15■■□□□ 1.46
SHCBP1-203ENST00000564272 MTMR2Q13614 643 aa24.15■■□□□ 1.46
SHCBP1-203ENST00000564272 TTC6Q86TZ1 520 aa24.15■■□□□ 1.46
SHCBP1-203ENST00000564272 TRIM47Q96LD4 638 aa24.15■■□□□ 1.46
SHCBP1-203ENST00000564272 WDR18Q9BV38 432 aa24.15■■□□□ 1.46
SHCBP1-203ENST00000564272 PSMC4P43686 418 aa24.14■■□□□ 1.45
SHCBP1-203ENST00000564272 EVX2Q03828 476 aa24.14■■□□□ 1.45
SHCBP1-203ENST00000564272 SMCR8Q8TEV9 937 aaPredicted RBP24.14■■□□□ 1.45
SHCBP1-203ENST00000564272 ARMC5Q96C12 935 aa24.14■■□□□ 1.45
SHCBP1-203ENST00000564272 GPATCH3Q96I76 525 aa24.14■■□□□ 1.45
SHCBP1-203ENST00000564272 MCM9Q9NXL9 1143 aa24.14■■□□□ 1.45
SHCBP1-203ENST00000564272 GH2P01242 217 aa24.13■■□□□ 1.45
SHCBP1-203ENST00000564272 POLR3DP05423 398 aaPredicted RBP24.13■■□□□ 1.45
SHCBP1-203ENST00000564272 SH3D19Q5HYK7 790 aa24.13■■□□□ 1.45
SHCBP1-203ENST00000564272 TATDN1Q6P1N9 297 aa24.13■■□□□ 1.45
SHCBP1-203ENST00000564272 DCP1AQ9NPI6 582 aaPredicted RBP24.13■■□□□ 1.45
SHCBP1-203ENST00000564272 GINM1Q9NU53 330 aa24.13■■□□□ 1.45
SHCBP1-203ENST00000564272 PRKAB2O43741 272 aa24.12■■□□□ 1.45
SHCBP1-203ENST00000564272 FMNL1O95466 1100 aaPredicted RBP24.12■■□□□ 1.45
SHCBP1-203ENST00000564272 SHMT1P34896 483 aa24.12■■□□□ 1.45
SHCBP1-203ENST00000564272 PNMA3Q9UL41 463 aa24.12■■□□□ 1.45
SHCBP1-203ENST00000564272 MGAMO43451 1857 aa24.11■■□□□ 1.45
SHCBP1-203ENST00000564272 GNRH1P01148 92 aa24.11■■□□□ 1.45
SHCBP1-203ENST00000564272 CYP2D6P10635 497 aa24.11■■□□□ 1.45
SHCBP1-203ENST00000564272 OSBPP22059 807 aa24.11■■□□□ 1.45
SHCBP1-203ENST00000564272 BACE1P56817 501 aa24.11■■□□□ 1.45
SHCBP1-203ENST00000564272 UBE3CQ15386 1083 aa24.11■■□□□ 1.45
SHCBP1-203ENST00000564272 SLC9C1Q4G0N8 1177 aa24.11■■□□□ 1.45
SHCBP1-203ENST00000564272 CERKLQ49MI3 558 aaPredicted RBP24.1■■□□□ 1.45
SHCBP1-203ENST00000564272 ANKRD13CQ8N6S4 541 aa24.1■■□□□ 1.45
SHCBP1-203ENST00000564272 OTUD7AQ8TE49 926 aaPredicted RBP24.1■■□□□ 1.45
SHCBP1-203ENST00000564272 BAZ2AQ9UIF9 1905 aaKnown RBP24.1■■□□□ 1.45
SHCBP1-203ENST00000564272 USP17L10C9JJH3 530 aa24.09■■□□□ 1.45
SHCBP1-203ENST00000564272 FCGRTP55899 365 aa24.09■■□□□ 1.45
SHCBP1-203ENST00000564272 GABPAQ06546 454 aa24.09■■□□□ 1.45
SHCBP1-203ENST00000564272 ZSCAN25Q6NSZ9 544 aa24.09■■□□□ 1.45
SHCBP1-203ENST00000564272 SH3TC2Q8TF17 1288 aa24.09■■□□□ 1.45
SHCBP1-203ENST00000564272 ZNF333Q96JL9 665 aa24.09■■□□□ 1.45
SHCBP1-203ENST00000564272 PUS7LQ9H0K6 701 aaKnown RBP24.09■■□□□ 1.45
SHCBP1-203ENST00000564272 ASCC2Q9H1I8 757 aaPredicted RBP24.09■■□□□ 1.45
SHCBP1-203ENST00000564272 TMOD4Q9NZQ9 345 aa24.09■■□□□ 1.45
SHCBP1-203ENST00000564272 SRRDQ9UH36 339 aa24.09■■□□□ 1.45
SHCBP1-203ENST00000564272 MYPNQ86TC9 1320 aa24.09■■□□□ 1.45
SHCBP1-203ENST00000564272 POTEFA5A3E0 1075 aa24.08■■□□□ 1.45
SHCBP1-203ENST00000564272 PRMT2P55345 433 aa24.08■■□□□ 1.45
SHCBP1-203ENST00000564272 PABPC4Q13310 644 aaKnown RBP eCLIP24.08■■□□□ 1.45
SHCBP1-203ENST00000564272 RAB3GAP1Q15042 981 aa24.08■■□□□ 1.45
SHCBP1-203ENST00000564272 ABCB5Q2M3G0 1257 aa24.08■■□□□ 1.45
SHCBP1-203ENST00000564272 RBBP6Q7Z6E9 1792 aaKnown RBP24.08■■□□□ 1.44
SHCBP1-203ENST00000564272 C19orf81C9J6K1 198 aa24.07■■□□□ 1.44
SHCBP1-203ENST00000564272 KBTBD3Q8NAB2 608 aa24.07■■□□□ 1.44
SHCBP1-203ENST00000564272 SLC44A5Q8NCS7 719 aa24.07■■□□□ 1.44
SHCBP1-203ENST00000564272 MYCP01106 439 aaPredicted RBP24.06■■□□□ 1.44
SHCBP1-203ENST00000564272 HOXD10P28358 340 aa24.06■■□□□ 1.44
SHCBP1-203ENST00000564272 PRKCZQ05513 592 aa24.06■■□□□ 1.44
SHCBP1-203ENST00000564272 ZYXQ15942 572 aaKnown RBP24.06■■□□□ 1.44
SHCBP1-203ENST00000564272 DYNLL2Q96FJ2 89 aa24.06■■□□□ 1.44
SHCBP1-203ENST00000564272 FEZ1Q99689 392 aa24.06■■□□□ 1.44
SHCBP1-203ENST00000564272 ATP8A2Q9NTI2 1148 aa24.06■■□□□ 1.44
SHCBP1-203ENST00000564272 SLC4A4Q9Y6R1 1079 aa24.06■■□□□ 1.44
SHCBP1-203ENST00000564272 TTC41PQ6P2S7 1318 aa24.06■■□□□ 1.44
SHCBP1-203ENST00000564272 SMIM22K7EJ46 135 aa24.05■■□□□ 1.44
SHCBP1-203ENST00000564272 GUCY1A2P33402 732 aa24.05■■□□□ 1.44
SHCBP1-203ENST00000564272 IRX3P78415 501 aaPredicted RBP24.05■■□□□ 1.44
SHCBP1-203ENST00000564272 FAM110CQ1W6H9 321 aa24.05■■□□□ 1.44
SHCBP1-203ENST00000564272 NBPF11Q86T75 865 aa24.05■■□□□ 1.44
SHCBP1-203ENST00000564272 PI4K2BQ8TCG2 481 aa24.05■■□□□ 1.44
SHCBP1-203ENST00000564272 RAET1EQ8TD07 263 aa24.05■■□□□ 1.44
SHCBP1-203ENST00000564272 CABP5Q9NP86 173 aa24.05■■□□□ 1.44
SHCBP1-203ENST00000564272 EMILIN3Q9NT22 766 aa24.05■■□□□ 1.44
SHCBP1-203ENST00000564272 GABRQQ9UN88 632 aa24.05■■□□□ 1.44
SHCBP1-203ENST00000564272 CENPFP49454 3210 aa24.05■■□□□ 1.44
SHCBP1-203ENST00000564272 KIAA0100Q14667 2235 aaKnown RBP24.04■■□□□ 1.44
SHCBP1-203ENST00000564272 CYP2D7A0A087X1C5 515 aa24.04■■□□□ 1.44
SHCBP1-203ENST00000564272 USP17L2Q6R6M4 530 aa24.04■■□□□ 1.44
SHCBP1-203ENST00000564272 ACER1Q8TDN7 264 aa24.04■■□□□ 1.44
SHCBP1-203ENST00000564272 MYH8P13535 1937 aa24.04■■□□□ 1.44
SHCBP1-203ENST00000564272 TNRC18O15417 2968 aaPredicted RBP24.03■■□□□ 1.44
SHCBP1-203ENST00000564272 TNPO2O14787 897 aaKnown RBP24.03■■□□□ 1.44
SHCBP1-203ENST00000564272 MX1P20591 662 aa24.03■■□□□ 1.44
SHCBP1-203ENST00000564272 HOXA7P31268 230 aaPredicted RBP24.03■■□□□ 1.44
SHCBP1-203ENST00000564272 GCLCP48506 637 aaPredicted RBP24.03■■□□□ 1.44
SHCBP1-203ENST00000564272 HDAC1Q13547 482 aaPredicted RBP24.03■■□□□ 1.44
SHCBP1-203ENST00000564272 SEPT2Q15019 361 aa24.03■■□□□ 1.44
SHCBP1-203ENST00000564272 USP17L12C9JPN9 530 aa24.02■■□□□ 1.44
SHCBP1-203ENST00000564272 USP17L21D6R901 530 aa24.02■■□□□ 1.44
SHCBP1-203ENST00000564272 MPHOSPH10O00566 681 aaKnown RBP24.02■■□□□ 1.44
SHCBP1-203ENST00000564272 ERC2O15083 957 aa24.02■■□□□ 1.44
SHCBP1-203ENST00000564272 RNF113AO15541 343 aaKnown RBP24.02■■□□□ 1.44
SHCBP1-203ENST00000564272 PEX10O60683 326 aa24.02■■□□□ 1.44
SHCBP1-203ENST00000564272 ANKRD45Q5TZF3 282 aa24.02■■□□□ 1.44
SHCBP1-203ENST00000564272 APPBP2Q92624 585 aa24.02■■□□□ 1.44
SHCBP1-203ENST00000564272 OSBP2Q969R2 916 aa24.02■■□□□ 1.44
SHCBP1-203ENST00000564272 STRBPQ96SI9 672 aaKnown RBP24.02■■□□□ 1.44
SHCBP1-203ENST00000564272 P2RX7Q99572 595 aaKnown RBP24.02■■□□□ 1.44
SHCBP1-203ENST00000564272 GLRX3O76003 335 aaKnown RBP24.01■■□□□ 1.43
SHCBP1-203ENST00000564272 C12orf60Q5U649 245 aa24.01■■□□□ 1.43
SHCBP1-203ENST00000564272 DDRGK1Q96HY6 314 aa24.01■■□□□ 1.43
SHCBP1-203ENST00000564272 C12orf42Q96LP6 360 aa24.01■■□□□ 1.43
SHCBP1-203ENST00000564272 SWAP70Q9UH65 585 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms