RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 ZSCAN29Q8IWY8 852 aaPredicted RBP20.08■□□□□ 0.81
CMTM3-208ENST00000564247 OPTNQ96CV9 577 aa20.08■□□□□ 0.81
CMTM3-208ENST00000564247 WRNIP1Q96S55 665 aa20.08■□□□□ 0.81
CMTM3-208ENST00000564247 OSBPL5Q9H0X9 879 aaPredicted RBP20.08■□□□□ 0.81
CMTM3-208ENST00000564247 DHX36Q9H2U1 1008 aaKnown RBP20.08■□□□□ 0.81
CMTM3-208ENST00000564247 DDX4Q9NQI0 724 aaKnown RBP20.08■□□□□ 0.81
CMTM3-208ENST00000564247 SNX14Q9Y5W7 946 aa20.08■□□□□ 0.81
CMTM3-208ENST00000564247 MYH1P12882 1939 aa20.08■□□□□ 0.8
CMTM3-208ENST00000564247 HLA-DOAP06340 250 aa20.07■□□□□ 0.8
CMTM3-208ENST00000564247 PSMA5P28066 241 aa20.07■□□□□ 0.8
CMTM3-208ENST00000564247 TRDNQ13061 729 aa20.07■□□□□ 0.8
CMTM3-208ENST00000564247 C12orf60Q5U649 245 aa20.07■□□□□ 0.8
CMTM3-208ENST00000564247 RNF41Q9H4P4 317 aaPredicted RBP20.07■□□□□ 0.8
CMTM3-208ENST00000564247 ANAPC4Q9UJX5 808 aa20.07■□□□□ 0.8
CMTM3-208ENST00000564247 PALD1Q9ULE6 856 aa20.07■□□□□ 0.8
CMTM3-208ENST00000564247 FOCADQ5VW36 1801 aa20.06■□□□□ 0.8
CMTM3-208ENST00000564247 MFSD6Q6ZSS7 791 aa20.06■□□□□ 0.8
CMTM3-208ENST00000564247 RASEFQ8IZ41 740 aa20.06■□□□□ 0.8
CMTM3-208ENST00000564247 CFHR5Q9BXR6 569 aa20.06■□□□□ 0.8
CMTM3-208ENST00000564247 ZNF287Q9HBT7 754 aa20.06■□□□□ 0.8
CMTM3-208ENST00000564247 ZNF112Q9UJU3 913 aa20.06■□□□□ 0.8
CMTM3-208ENST00000564247 ATRNL1Q5VV63 1379 aa20.06■□□□□ 0.8
CMTM3-208ENST00000564247 NAV1Q8NEY1 1877 aa20.05■□□□□ 0.8
CMTM3-208ENST00000564247 TESPA1A2RU30 521 aaPredicted RBP20.05■□□□□ 0.8
CMTM3-208ENST00000564247 SPDYE5A6NIY4 337 aa20.05■□□□□ 0.8
CMTM3-208ENST00000564247 E7EWF7 191 aa20.05■□□□□ 0.8
CMTM3-208ENST00000564247 ALDH1A1P00352 501 aa20.05■□□□□ 0.8
CMTM3-208ENST00000564247 PCP11498 1178 aaKnown RBP20.05■□□□□ 0.8
CMTM3-208ENST00000564247 CTDSPL2Q05D32 466 aa20.05■□□□□ 0.8
CMTM3-208ENST00000564247 PDE4BQ07343 736 aa20.05■□□□□ 0.8
CMTM3-208ENST00000564247 SH3BP5LQ7L8J4 393 aa20.05■□□□□ 0.8
CMTM3-208ENST00000564247 ERO1BQ86YB8 467 aa20.05■□□□□ 0.8
CMTM3-208ENST00000564247 IFNL1Q8IU54 200 aa20.05■□□□□ 0.8
CMTM3-208ENST00000564247 ZKSCAN4Q969J2 545 aaPredicted RBP20.05■□□□□ 0.8
CMTM3-208ENST00000564247 PI4KBQ9UBF8 816 aa20.05■□□□□ 0.8
CMTM3-208ENST00000564247 SNCAIPQ9Y6H5 919 aa20.05■□□□□ 0.8
CMTM3-208ENST00000564247 CYP2D7A0A087X1C5 515 aa20.04■□□□□ 0.8
CMTM3-208ENST00000564247 CYP2D6P10635 497 aa20.04■□□□□ 0.8
CMTM3-208ENST00000564247 MAP3K10Q02779 954 aa20.04■□□□□ 0.8
CMTM3-208ENST00000564247 AKNAD1Q5T1N1 836 aa20.04■□□□□ 0.8
CMTM3-208ENST00000564247 FOXP4Q8IVH2 680 aaPredicted RBP20.04■□□□□ 0.8
CMTM3-208ENST00000564247 CNKSR2Q8WXI2 1034 aa20.04■□□□□ 0.8
CMTM3-208ENST00000564247 MS4A4AQ96JQ5 239 aa20.04■□□□□ 0.8
CMTM3-208ENST00000564247 TRIM34Q9BYJ4 488 aa20.04■□□□□ 0.8
CMTM3-208ENST00000564247 CNNM2Q9H8M5 875 aa20.04■□□□□ 0.8
CMTM3-208ENST00000564247 COL2A1P02458 1487 aaPredicted RBP20.04■□□□□ 0.8
CMTM3-208ENST00000564247 DDTLA6NHG4 134 aaPredicted RBP20.03■□□□□ 0.8
CMTM3-208ENST00000564247 TBC1D8O95759 1140 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 HMGB1P09429 215 aaKnown RBP20.03■□□□□ 0.8
CMTM3-208ENST00000564247 INPP5BP32019 993 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 PLCD1P51178 756 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 SLC4A8Q2Y0W8 1093 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 NOM1Q5C9Z4 860 aaKnown RBP20.03■□□□□ 0.8
CMTM3-208ENST00000564247 RALYLQ86SE5 291 aaKnown RBP20.03■□□□□ 0.8
CMTM3-208ENST00000564247 STK11IPQ8N1F8 1099 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 NCOA7Q8NI08 942 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 STAG1Q8WVM7 1258 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 IL17RAQ96F46 866 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 OTUD5Q96G74 571 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 JAKMIP1Q96N16 626 aaKnown RBP20.03■□□□□ 0.8
CMTM3-208ENST00000564247 NEK1Q96PY6 1258 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 TM6SF1Q9BZW5 370 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 KRT23Q9C075 422 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 TSHZ2Q9NRE2 1034 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 TOMM22Q9NS69 142 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 TAOK2Q9UL54 1235 aa20.03■□□□□ 0.8
CMTM3-208ENST00000564247 IGF2BP3O00425 579 aaKnown RBP eCLIP20.02■□□□□ 0.8
CMTM3-208ENST00000564247 GTF2A2P52657 109 aa20.02■□□□□ 0.8
CMTM3-208ENST00000564247 RABEP1Q15276 862 aa20.02■□□□□ 0.8
CMTM3-208ENST00000564247 NOL9Q5SY16 702 aaKnown RBP20.02■□□□□ 0.8
CMTM3-208ENST00000564247 IL27Q8NEV9 243 aa20.02■□□□□ 0.8
CMTM3-208ENST00000564247 MKNK2Q9HBH9 465 aa20.02■□□□□ 0.8
CMTM3-208ENST00000564247 OTUD7BQ6GQQ9 843 aa20.01■□□□□ 0.79
CMTM3-208ENST00000564247 TBC1D10CQ8IV04 446 aa20.01■□□□□ 0.79
CMTM3-208ENST00000564247 CRACR2BQ8N4Y2 399 aaPredicted RBP20.01■□□□□ 0.79
CMTM3-208ENST00000564247 SWAP70Q9UH65 585 aa20.01■□□□□ 0.79
CMTM3-208ENST00000564247 SERPINB13Q9UIV8 391 aa20.01■□□□□ 0.79
CMTM3-208ENST00000564247 CYP46A1Q9Y6A2 500 aa20.01■□□□□ 0.79
CMTM3-208ENST00000564247 LAMA4Q16363 1823 aa20.01■□□□□ 0.79
CMTM3-208ENST00000564247 PHF20L1A8MW92 1017 aa20■□□□□ 0.79
CMTM3-208ENST00000564247 TBC1D12O60347 775 aa20■□□□□ 0.79
CMTM3-208ENST00000564247 CASTP20810 708 aaKnown RBP20■□□□□ 0.79
CMTM3-208ENST00000564247 NT5C2P49902 561 aa20■□□□□ 0.79
CMTM3-208ENST00000564247 PPATQ06203 517 aa20■□□□□ 0.79
CMTM3-208ENST00000564247 PPIL2Q13356 520 aa20■□□□□ 0.79
CMTM3-208ENST00000564247 ADCK5Q3MIX3 580 aa20■□□□□ 0.79
CMTM3-208ENST00000564247 RRP12Q5JTH9 1297 aaKnown RBP20■□□□□ 0.79
CMTM3-208ENST00000564247 BLOC1S2Q6QNY1 142 aa20■□□□□ 0.79
CMTM3-208ENST00000564247 STOX1Q6ZVD7 989 aa20■□□□□ 0.79
CMTM3-208ENST00000564247 ZNF444Q8N0Y2 327 aaPredicted RBP20■□□□□ 0.79
CMTM3-208ENST00000564247 KIF2CQ99661 725 aa20■□□□□ 0.79
CMTM3-208ENST00000564247 PTPN18Q99952 460 aa20■□□□□ 0.79
CMTM3-208ENST00000564247 NBPF3Q9H094 633 aa20■□□□□ 0.79
CMTM3-208ENST00000564247 EHD4Q9H223 541 aa20■□□□□ 0.79
CMTM3-208ENST00000564247 TAF6LQ9Y6J9 622 aa20■□□□□ 0.79
CMTM3-208ENST00000564247 CCL15-CCL14A0A0B4J2E2 113 aa19.99■□□□□ 0.79
CMTM3-208ENST00000564247 IRF6O14896 467 aa19.99■□□□□ 0.79
CMTM3-208ENST00000564247 ORC4O43929 436 aa19.99■□□□□ 0.79
CMTM3-208ENST00000564247 FGRP09769 529 aa19.99■□□□□ 0.79
CMTM3-208ENST00000564247 CDK8P49336 464 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms