RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 TATDN1Q6P1N9 297 aa17.88■□□□□ 0.45
SNX29-203ENST00000564111 SMCR8Q8TEV9 937 aaPredicted RBP17.88■□□□□ 0.45
SNX29-203ENST00000564111 CABP5Q9NP86 173 aa17.88■□□□□ 0.45
SNX29-203ENST00000564111 FAM196BA6NMK8 535 aa17.87■□□□□ 0.45
SNX29-203ENST00000564111 GCC1Q96CN9 775 aa17.87■□□□□ 0.45
SNX29-203ENST00000564111 NDUFB9Q9Y6M9 179 aa17.87■□□□□ 0.45
SNX29-203ENST00000564111 USP14P54578 494 aa17.87■□□□□ 0.45
SNX29-203ENST00000564111 SPP2Q13103 211 aa17.87■□□□□ 0.45
SNX29-203ENST00000564111 USP17L2Q6R6M4 530 aa17.87■□□□□ 0.45
SNX29-203ENST00000564111 CPA4Q9UI42 421 aa17.87■□□□□ 0.45
SNX29-203ENST00000564111 BACE1P56817 501 aa17.86■□□□□ 0.45
SNX29-203ENST00000564111 TICAM2Q86XR7 235 aa17.86■□□□□ 0.45
SNX29-203ENST00000564111 DNAJC18Q9H819 358 aa17.86■□□□□ 0.45
SNX29-203ENST00000564111 USP17L10C9JJH3 530 aa17.85■□□□□ 0.45
SNX29-203ENST00000564111 GLRX3O76003 335 aaKnown RBP17.85■□□□□ 0.45
SNX29-203ENST00000564111 HDAC1Q13547 482 aaPredicted RBP17.85■□□□□ 0.45
SNX29-203ENST00000564111 CERKLQ49MI3 558 aaPredicted RBP17.85■□□□□ 0.45
SNX29-203ENST00000564111 SLC9C1Q4G0N8 1177 aa17.85■□□□□ 0.45
SNX29-203ENST00000564111 SRRDQ9UH36 339 aa17.85■□□□□ 0.45
SNX29-203ENST00000564111 FMNL1O95466 1100 aaPredicted RBP17.84■□□□□ 0.45
SNX29-203ENST00000564111 PSMC4P43686 418 aa17.84■□□□□ 0.45
SNX29-203ENST00000564111 FAM110CQ1W6H9 321 aa17.84■□□□□ 0.45
SNX29-203ENST00000564111 ABCB5Q2M3G0 1257 aa17.84■□□□□ 0.45
SNX29-203ENST00000564111 KBTBD3Q8NAB2 608 aa17.84■□□□□ 0.45
SNX29-203ENST00000564111 MCM9Q9NXL9 1143 aa17.84■□□□□ 0.45
SNX29-203ENST00000564111 SMARCA5O60264 1052 aaPredicted RBP17.84■□□□□ 0.45
SNX29-203ENST00000564111 MBD4O95243 580 aa17.84■□□□□ 0.45
SNX29-203ENST00000564111 HOXA7P31268 230 aaPredicted RBP17.84■□□□□ 0.45
SNX29-203ENST00000564111 HMGCS2P54868 508 aa17.84■□□□□ 0.45
SNX29-203ENST00000564111 IRX3P78415 501 aaPredicted RBP17.84■□□□□ 0.45
SNX29-203ENST00000564111 GIMAP6Q6P9H5 292 aa17.84■□□□□ 0.45
SNX29-203ENST00000564111 C12orf42Q96LP6 360 aa17.84■□□□□ 0.45
SNX29-203ENST00000564111 TMEM106CQ9BVX2 250 aa17.84■□□□□ 0.45
SNX29-203ENST00000564111 GNAT2P19087 354 aa17.83■□□□□ 0.45
SNX29-203ENST00000564111 SOX10P56693 466 aa17.83■□□□□ 0.45
SNX29-203ENST00000564111 LCORLQ8N3X6 602 aa17.83■□□□□ 0.45
SNX29-203ENST00000564111 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.45
SNX29-203ENST00000564111 CRBNQ96SW2 442 aa17.83■□□□□ 0.45
SNX29-203ENST00000564111 DCP1AQ9NPI6 582 aaPredicted RBP17.83■□□□□ 0.45
SNX29-203ENST00000564111 ZSWIM8A7E2V4 1837 aa17.83■□□□□ 0.44
SNX29-203ENST00000564111 MTMR2Q13614 643 aa17.83■□□□□ 0.44
SNX29-203ENST00000564111 MYPNQ86TC9 1320 aa17.83■□□□□ 0.44
SNX29-203ENST00000564111 TRIM47Q96LD4 638 aa17.83■□□□□ 0.44
SNX29-203ENST00000564111 SH2D4AQ9H788 454 aa17.83■□□□□ 0.44
SNX29-203ENST00000564111 ARPP21Q9UBL0 812 aaPredicted RBP17.83■□□□□ 0.44
SNX29-203ENST00000564111 PCDHB15Q9Y5E8 787 aa17.83■□□□□ 0.44
SNX29-203ENST00000564111 PTCH2Q9Y6C5 1203 aa17.83■□□□□ 0.44
SNX29-203ENST00000564111 GDF11O95390 407 aa17.82■□□□□ 0.44
SNX29-203ENST00000564111 CYP2C8P10632 490 aa17.82■□□□□ 0.44
SNX29-203ENST00000564111 RRP1BQ14684 758 aaKnown RBP17.82■□□□□ 0.44
SNX29-203ENST00000564111 SLAIN1Q8ND83 568 aa17.82■□□□□ 0.44
SNX29-203ENST00000564111 RAET1EQ8TD07 263 aa17.82■□□□□ 0.44
SNX29-203ENST00000564111 APPBP2Q92624 585 aa17.82■□□□□ 0.44
SNX29-203ENST00000564111 CCDC17Q96LX7 622 aa17.82■□□□□ 0.44
SNX29-203ENST00000564111 FEZ1Q99689 392 aa17.82■□□□□ 0.44
SNX29-203ENST00000564111 ARMT1Q9H993 441 aa17.82■□□□□ 0.44
SNX29-203ENST00000564111 BAZ2AQ9UIF9 1905 aaKnown RBP17.82■□□□□ 0.44
SNX29-203ENST00000564111 GH2P01242 217 aa17.82■□□□□ 0.44
SNX29-203ENST00000564111 GABPAQ06546 454 aa17.82■□□□□ 0.44
SNX29-203ENST00000564111 COA7Q96BR5 231 aa17.82■□□□□ 0.44
SNX29-203ENST00000564111 ZNF333Q96JL9 665 aa17.82■□□□□ 0.44
SNX29-203ENST00000564111 KIAA1683Q9H0B3 1180 aa17.82■□□□□ 0.44
SNX29-203ENST00000564111 BCL11AQ9H165 835 aa17.82■□□□□ 0.44
SNX29-203ENST00000564111 TMEM179Q6ZVK1 233 aa17.81■□□□□ 0.44
SNX29-203ENST00000564111 MORF4L1Q9UBU8 362 aa17.81■□□□□ 0.44
SNX29-203ENST00000564111 RNF113AO15541 343 aaKnown RBP17.8■□□□□ 0.44
SNX29-203ENST00000564111 SHMT1P34896 483 aa17.8■□□□□ 0.44
SNX29-203ENST00000564111 UBXN2AP68543 259 aa17.8■□□□□ 0.44
SNX29-203ENST00000564111 TREML2Q5T2D2 321 aa17.8■□□□□ 0.44
SNX29-203ENST00000564111 ASCC2Q9H1I8 757 aaPredicted RBP17.8■□□□□ 0.44
SNX29-203ENST00000564111 RWDD1Q9H446 243 aaPredicted RBP17.8■□□□□ 0.44
SNX29-203ENST00000564111 SLURP2P0DP57 97 aa17.8■□□□□ 0.44
SNX29-203ENST00000564111 MX1P20591 662 aa17.8■□□□□ 0.44
SNX29-203ENST00000564111 IRF5Q13568 498 aa17.8■□□□□ 0.44
SNX29-203ENST00000564111 EDC3Q96F86 508 aaKnown RBP17.8■□□□□ 0.44
SNX29-203ENST00000564111 SLC4A4Q9Y6R1 1079 aa17.8■□□□□ 0.44
SNX29-203ENST00000564111 TNPO2O14787 897 aaKnown RBP17.79■□□□□ 0.44
SNX29-203ENST00000564111 CCDC84Q86UT8 332 aaPredicted RBP17.79■□□□□ 0.44
SNX29-203ENST00000564111 ZNF287Q9HBT7 754 aa17.79■□□□□ 0.44
SNX29-203ENST00000564111 USP17L15C9J2P7 530 aa17.79■□□□□ 0.44
SNX29-203ENST00000564111 USP17L13C9JLJ4 530 aa17.79■□□□□ 0.44
SNX29-203ENST00000564111 USP17L11C9JVI0 530 aa17.79■□□□□ 0.44
SNX29-203ENST00000564111 USP17L18D6R9N7 530 aa17.79■□□□□ 0.44
SNX29-203ENST00000564111 USP17L22D6RA61 530 aa17.79■□□□□ 0.44
SNX29-203ENST00000564111 USP17L17D6RBQ6 530 aa17.79■□□□□ 0.44
SNX29-203ENST00000564111 USP17L19D6RCP7 530 aa17.79■□□□□ 0.44
SNX29-203ENST00000564111 USP17L20D6RJB6 530 aa17.79■□□□□ 0.44
SNX29-203ENST00000564111 USP17L24Q0WX57 530 aa17.79■□□□□ 0.44
SNX29-203ENST00000564111 SDR42E1Q8WUS8 393 aa17.79■□□□□ 0.44
SNX29-203ENST00000564111 ARHGAP39Q9C0H5 1083 aa17.79■□□□□ 0.44
SNX29-203ENST00000564111 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.79■□□□□ 0.44
SNX29-203ENST00000564111 PLCD1P51178 756 aa17.78■□□□□ 0.44
SNX29-203ENST00000564111 SBK1Q52WX2 424 aa17.78■□□□□ 0.44
SNX29-203ENST00000564111 NKX2-3Q8TAU0 364 aa17.78■□□□□ 0.44
SNX29-203ENST00000564111 ARHGEF10LQ9HCE6 1279 aa17.78■□□□□ 0.44
SNX29-203ENST00000564111 GRK4P32298 578 aa17.78■□□□□ 0.44
SNX29-203ENST00000564111 RAB3GAP1Q15042 981 aa17.78■□□□□ 0.44
SNX29-203ENST00000564111 C12orf60Q5U649 245 aa17.78■□□□□ 0.44
SNX29-203ENST00000564111 PXYLP1Q8TE99 480 aa17.78■□□□□ 0.44
SNX29-203ENST00000564111 PCDH10Q9P2E7 1040 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms