RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 FAM84BQ96KN1 310 aaPredicted RBP22.95■■□□□ 1.26
MSLN-205ENST00000563941 ZNF831Q5JPB2 1677 aa22.95■■□□□ 1.26
MSLN-205ENST00000563941 NUTM2BA6NNL0 878 aaPredicted RBP22.94■■□□□ 1.26
MSLN-205ENST00000563941 NUTM2EB1AL46 878 aaPredicted RBP22.94■■□□□ 1.26
MSLN-205ENST00000563941 CBFA2T2O43439 604 aa22.94■■□□□ 1.26
MSLN-205ENST00000563941 TOM1O60784 492 aa22.94■■□□□ 1.26
MSLN-205ENST00000563941 SERPINC1P01008 464 aa22.94■■□□□ 1.26
MSLN-205ENST00000563941 UBASH3AP57075 661 aa22.94■■□□□ 1.26
MSLN-205ENST00000563941 PIP4K2BP78356 416 aa22.94■■□□□ 1.26
MSLN-205ENST00000563941 AKAP17AQ02040 695 aaKnown RBP22.94■■□□□ 1.26
MSLN-205ENST00000563941 NUTM2AQ8IVF1 878 aaPredicted RBP22.94■■□□□ 1.26
MSLN-205ENST00000563941 ZNF579Q8NAF0 562 aaKnown RBP22.94■■□□□ 1.26
MSLN-205ENST00000563941 DPF2Q92785 391 aa22.94■■□□□ 1.26
MSLN-205ENST00000563941 CEP131Q9UPN4 1083 aa22.94■■□□□ 1.26
MSLN-205ENST00000563941 BMP6P22004 513 aa22.94■■□□□ 1.26
MSLN-205ENST00000563941 POSTNQ15063 836 aa22.94■■□□□ 1.26
MSLN-205ENST00000563941 E4F1Q66K89 784 aaPredicted RBP22.94■■□□□ 1.26
MSLN-205ENST00000563941 BICDL1Q6ZP65 573 aa22.94■■□□□ 1.26
MSLN-205ENST00000563941 ZNF384Q8TF68 577 aa22.94■■□□□ 1.26
MSLN-205ENST00000563941 CELF1Q92879 486 aaKnown RBP22.94■■□□□ 1.26
MSLN-205ENST00000563941 SHISA4Q96DD7 197 aa22.94■■□□□ 1.26
MSLN-205ENST00000563941 CABP5Q9NP86 173 aa22.94■■□□□ 1.26
MSLN-205ENST00000563941 SRPRBQ9Y5M8 271 aaKnown RBP22.94■■□□□ 1.26
MSLN-205ENST00000563941 DLEC1Q9Y238 1755 aa22.93■■□□□ 1.26
MSLN-205ENST00000563941 POLR2DO15514 142 aaKnown RBP22.93■■□□□ 1.26
MSLN-205ENST00000563941 ATP2B1P20020 1258 aa22.93■■□□□ 1.26
MSLN-205ENST00000563941 IFIT1BQ5T764 474 aaKnown RBP22.93■■□□□ 1.26
MSLN-205ENST00000563941 SERTAD1Q9UHV2 236 aa22.93■■□□□ 1.26
MSLN-205ENST00000563941 MYO1BO43795 1136 aa22.93■■□□□ 1.26
MSLN-205ENST00000563941 NRDCO43847 1150 aa22.93■■□□□ 1.26
MSLN-205ENST00000563941 KCNJ6P48051 423 aa22.93■■□□□ 1.26
MSLN-205ENST00000563941 PDE4BQ07343 736 aa22.93■■□□□ 1.26
MSLN-205ENST00000563941 PKN1Q16512 942 aa22.93■■□□□ 1.26
MSLN-205ENST00000563941 FANCLQ9NW38 375 aa22.93■■□□□ 1.26
MSLN-205ENST00000563941 VPS54Q9P1Q0 977 aa22.93■■□□□ 1.26
MSLN-205ENST00000563941 MAN1B1Q9UKM7 699 aa22.93■■□□□ 1.26
MSLN-205ENST00000563941 XBP1P17861 261 aa22.92■■□□□ 1.26
MSLN-205ENST00000563941 GTF2E1P29083 439 aaPredicted RBP22.92■■□□□ 1.26
MSLN-205ENST00000563941 CFAP100Q494V2 611 aa22.92■■□□□ 1.26
MSLN-205ENST00000563941 PPP4R3BQ5MIZ7 849 aa22.92■■□□□ 1.26
MSLN-205ENST00000563941 CATIPQ7Z7H3 387 aa22.92■■□□□ 1.26
MSLN-205ENST00000563941 MYH13Q9UKX3 1938 aa22.92■■□□□ 1.26
MSLN-205ENST00000563941 PRDM1O75626 825 aa22.91■■□□□ 1.26
MSLN-205ENST00000563941 PRR29P0C7W0 189 aa22.91■■□□□ 1.26
MSLN-205ENST00000563941 FUT2Q10981 343 aa22.91■■□□□ 1.26
MSLN-205ENST00000563941 PSDA5PKW4 1024 aaPredicted RBP22.91■■□□□ 1.26
MSLN-205ENST00000563941 KIF2AO00139 706 aaPredicted RBP22.91■■□□□ 1.26
MSLN-205ENST00000563941 PCP11498 1178 aaKnown RBP22.91■■□□□ 1.26
MSLN-205ENST00000563941 KCNQ4P56696 695 aa22.91■■□□□ 1.26
MSLN-205ENST00000563941 NT5DC1Q5TFE4 455 aa22.91■■□□□ 1.26
MSLN-205ENST00000563941 TBC1D9BQ66K14 1250 aa22.91■■□□□ 1.26
MSLN-205ENST00000563941 CTR9Q6PD62 1173 aa22.91■■□□□ 1.26
MSLN-205ENST00000563941 IQCA1Q86XH1 822 aa22.91■■□□□ 1.26
MSLN-205ENST00000563941 PPP1R13BQ96KQ4 1090 aa22.91■■□□□ 1.26
MSLN-205ENST00000563941 CSRNP2Q9H175 543 aa22.91■■□□□ 1.26
MSLN-205ENST00000563941 FAM205CA6NFA0 338 aa22.9■■□□□ 1.26
MSLN-205ENST00000563941 SEMA3EO15041 775 aa22.9■■□□□ 1.26
MSLN-205ENST00000563941 PRPF3O43395 683 aaKnown RBP22.9■■□□□ 1.26
MSLN-205ENST00000563941 PLEKHA8P1O95397 391 aa22.9■■□□□ 1.26
MSLN-205ENST00000563941 FGRP09769 529 aa22.9■■□□□ 1.26
MSLN-205ENST00000563941 SLC10A5Q5PT55 438 aa22.9■■□□□ 1.26
MSLN-205ENST00000563941 FBXO33Q7Z6M2 555 aa22.9■■□□□ 1.26
MSLN-205ENST00000563941 KIF18AQ8NI77 898 aa22.9■■□□□ 1.26
MSLN-205ENST00000563941 PHF20Q9BVI0 1012 aa22.9■■□□□ 1.26
MSLN-205ENST00000563941 RBM28Q9NW13 759 aaKnown RBP22.9■■□□□ 1.26
MSLN-205ENST00000563941 KLRK1P26718 216 aa22.9■■□□□ 1.26
MSLN-205ENST00000563941 KRT2P35908 639 aa22.9■■□□□ 1.26
MSLN-205ENST00000563941 SMARCE1Q969G3 411 aa22.9■■□□□ 1.26
MSLN-205ENST00000563941 hCG_1642624A0A1W2PR95 340 aa22.89■■□□□ 1.25
MSLN-205ENST00000563941 TRIM75PA6NK02 468 aa22.89■■□□□ 1.25
MSLN-205ENST00000563941 ACTN4O43707 911 aaKnown RBP22.89■■□□□ 1.25
MSLN-205ENST00000563941 SARSP49591 514 aaKnown RBP22.89■■□□□ 1.25
MSLN-205ENST00000563941 VSTM4Q8IW00 320 aa22.89■■□□□ 1.25
MSLN-205ENST00000563941 GRAMD1CQ8IYS0 662 aa22.89■■□□□ 1.25
MSLN-205ENST00000563941 PDILTQ8N807 584 aa22.89■■□□□ 1.25
MSLN-205ENST00000563941 NSUN4Q96CB9 384 aaKnown RBP22.89■■□□□ 1.25
MSLN-205ENST00000563941 NOL10Q9BSC4 688 aaKnown RBP22.89■■□□□ 1.25
MSLN-205ENST00000563941 USP17L12C9JPN9 530 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 USP17L21D6R901 530 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 CALM1P0DP23 149 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 CALM2P0DP24 149 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 CALM3P0DP25 149 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 TROAPQ12815 778 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 USP49Q70CQ1 688 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 V9GY48 417 aaPredicted RBP22.88■■□□□ 1.25
MSLN-205ENST00000563941 LAMB1P07942 1786 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 CNTNAP4Q9C0A0 1308 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 TMEM232C9JQI7 657 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 MECOMQ03112 1051 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 MORC3Q14149 939 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 NAA30Q147X3 362 aaPredicted RBP22.88■■□□□ 1.25
MSLN-205ENST00000563941 EARS2Q5JPH6 523 aaKnown RBP22.88■■□□□ 1.25
MSLN-205ENST00000563941 KANK3Q6NY19 840 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 SMIM5Q71RC9 77 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 MLKLQ8NB16 471 aa22.88■■□□□ 1.25
MSLN-205ENST00000563941 MORC2Q9Y6X9 1032 aaPredicted RBP22.88■■□□□ 1.25
MSLN-205ENST00000563941 DDAH1O94760 285 aa22.87■■□□□ 1.25
MSLN-205ENST00000563941 DACH1Q9UI36 760 aa22.87■■□□□ 1.25
MSLN-205ENST00000563941 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.87■■□□□ 1.25
MSLN-205ENST00000563941 TOP1P11387 765 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms