RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 PPARDQ03181 441 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 MORC3Q14149 939 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 IQCA1Q86XH1 822 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 SH2D3CQ8N5H7 860 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 MAP3K14Q99558 947 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 MYO1AQ9UBC5 1043 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 ADD3Q9UEY8 706 aaKnown RBP13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 FSBPO95073 299 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 PLCD1P51178 756 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 CEP85LQ5SZL2 805 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 NAIF1Q69YI7 327 aaPredicted RBP13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 APTXQ7Z2E3 356 aaKnown RBP13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 SMYD4Q8IYR2 804 aaPredicted RBP13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 ARL8AQ96BM9 186 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 RUFY1Q96T51 708 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 CHP1Q99653 195 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 C2orf54Q08AI8 447 aa13.92□□□□□ -0.18
SCAMP2-204ENST00000563829 NBPF14Q5TI25 921 aa13.92□□□□□ -0.18
SCAMP2-204ENST00000563829 AMOTL1Q8IY63 956 aa13.92□□□□□ -0.18
SCAMP2-204ENST00000563829 KRI1Q8N9T8 703 aaKnown RBP13.92□□□□□ -0.18
SCAMP2-204ENST00000563829 ABHD10Q9NUJ1 306 aa13.92□□□□□ -0.18
SCAMP2-204ENST00000563829 SH3TC1Q8TE82 1336 aa13.92□□□□□ -0.18
SCAMP2-204ENST00000563829 CASP1P29466 404 aa13.92□□□□□ -0.18
SCAMP2-204ENST00000563829 CDR1P51861 262 aa13.92□□□□□ -0.18
SCAMP2-204ENST00000563829 CYP26C1Q6V0L0 522 aa13.92□□□□□ -0.18
SCAMP2-204ENST00000563829 FAXDC2Q96IV6 333 aa13.92□□□□□ -0.18
SCAMP2-204ENST00000563829 SH3GL2Q99962 352 aa13.92□□□□□ -0.18
SCAMP2-204ENST00000563829 MYH8P13535 1937 aa13.92□□□□□ -0.18
SCAMP2-204ENST00000563829 AFMP43652 599 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 PREPLQ4J6C6 727 aaPredicted RBP13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 JAKMIP2Q96AA8 810 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 XAGE2Q96GT9 111 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 VPS16Q9H269 839 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 USP31Q70CQ4 1352 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 ZMYM6O95789 1325 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 TARSL2A2RTX5 802 aaKnown RBP13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 N4BP3O15049 544 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 KRT9P35527 623 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 CCDC40Q4G0X9 1142 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 CCDC122Q5T0U0 273 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 RIC3Q7Z5B4 369 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 AIDAQ96BJ3 306 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 SGSM3Q96HU1 749 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 TACO1Q9BSH4 297 aaKnown RBP13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 PAG1Q9NWQ8 432 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 FAM184BQ9ULE4 1060 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 SYNRGQ9UMZ2 1314 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 FAM237AA0A1B0GTK4 181 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 GOLGA8KD6RF30 607 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 GCFC2P16383 781 aaKnown RBP13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 MATR3P43243 847 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 IFT88Q13099 833 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 EZH2Q15910 746 aaKnown RBP13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 MPRIPQ6WCQ1 1025 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 SCLT1Q96NL6 688 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 JADE2Q9NQC1 790 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 HELLSQ9NRZ9 838 aa13.91□□□□□ -0.18
SCAMP2-204ENST00000563829 UBE2Q2LH0YL09 131 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 HOXB7P09629 217 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 PBX1P40424 430 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 SF3B2Q13435 895 aaKnown RBP13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 E2F5Q15329 346 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 SPATA1Q5VX52 437 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 RNF217Q8TC41 542 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 HDAC7Q8WUI4 952 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 EPN1Q9Y6I3 576 aaPredicted RBP13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 MAST3O60307 1309 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 PDE2AO00408 941 aaPredicted RBP13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 OPA1O60313 960 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 CLNS1AP54105 237 aaKnown RBP13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 GUCY1A3Q02108 690 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 BIRC2Q13490 618 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 TTMPQ5BVD1 217 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 RALYLQ86SE5 291 aaKnown RBP13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 LRRC37A3O60309 1634 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 USP6P35125 1406 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 AKAP12Q02952 1782 aa13.9□□□□□ -0.18
SCAMP2-204ENST00000563829 IGKV5-2P06315 115 aa13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 PDHBP11177 359 aa13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 SARSP49591 514 aaKnown RBP13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 SLC7A5Q01650 507 aa13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 TRIM29Q14134 588 aa13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 CCDC13Q8IYE1 715 aa13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 TEX11Q8IYF3 940 aa13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 CCDC51Q96ER9 411 aa13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 SKAP2O75563 359 aaPredicted RBP13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 NDUFA10O95299 355 aa13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 ERCC5P28715 1186 aaPredicted RBP13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 SEC24CP53992 1094 aa13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 NLRP6P59044 892 aa13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 CKAP4Q07065 602 aaKnown RBP13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 MICALCLQ6ZW33 695 aa13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 USP49Q70CQ1 688 aa13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 CTAGE1Q96RT6 745 aa13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 REXO2Q9Y3B8 237 aaKnown RBP13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 M0R2C6 588 aa13.89□□□□□ -0.19
SCAMP2-204ENST00000563829 KRT14P02533 472 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms