RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 MTMR2Q13614 643 aa25.59■■□□□ 1.69
CHD9-208ENST00000563410 COA7Q96BR5 231 aa25.59■■□□□ 1.69
CHD9-208ENST00000563410 H0YGN5 161 aa25.58■■□□□ 1.69
CHD9-208ENST00000563410 CRACR2BQ8N4Y2 399 aaPredicted RBP25.58■■□□□ 1.69
CHD9-208ENST00000563410 MIGA1Q8NAN2 632 aa25.58■■□□□ 1.69
CHD9-208ENST00000563410 COLQQ9Y215 455 aaPredicted RBP25.58■■□□□ 1.69
CHD9-208ENST00000563410 SGPL1O95470 568 aa25.57■■□□□ 1.68
CHD9-208ENST00000563410 AACSQ86V21 672 aa25.57■■□□□ 1.68
CHD9-208ENST00000563410 ERC1Q8IUD2 1116 aa25.57■■□□□ 1.68
CHD9-208ENST00000563410 MAGEB6Q8N7X4 407 aa25.57■■□□□ 1.68
CHD9-208ENST00000563410 TRIM34Q9BYJ4 488 aa25.57■■□□□ 1.68
CHD9-208ENST00000563410 GINM1Q9NU53 330 aa25.57■■□□□ 1.68
CHD9-208ENST00000563410 ZBTB21Q9ULJ3 1066 aa25.57■■□□□ 1.68
CHD9-208ENST00000563410 HLA-DOAP06340 250 aa25.56■■□□□ 1.68
CHD9-208ENST00000563410 HOXA7P31268 230 aaPredicted RBP25.56■■□□□ 1.68
CHD9-208ENST00000563410 MORF4L1Q9UBU8 362 aa25.56■■□□□ 1.68
CHD9-208ENST00000563410 GJD2Q9UKL4 321 aa25.56■■□□□ 1.68
CHD9-208ENST00000563410 TAOK2Q9UL54 1235 aa25.56■■□□□ 1.68
CHD9-208ENST00000563410 DDX60LQ5H9U9 1706 aaKnown RBP25.56■■□□□ 1.68
CHD9-208ENST00000563410 C19orf81C9J6K1 198 aa25.55■■□□□ 1.68
CHD9-208ENST00000563410 PAK6Q9NQU5 681 aaPredicted RBP25.55■■□□□ 1.68
CHD9-208ENST00000563410 TMOD4Q9NZQ9 345 aa25.55■■□□□ 1.68
CHD9-208ENST00000563410 USP17L10C9JJH3 530 aa25.54■■□□□ 1.68
CHD9-208ENST00000563410 CERS3Q8IU89 383 aa25.54■■□□□ 1.68
CHD9-208ENST00000563410 RHPN1Q8TCX5 695 aa25.54■■□□□ 1.68
CHD9-208ENST00000563410 DPF3Q92784 378 aa25.54■■□□□ 1.68
CHD9-208ENST00000563410 P2RX7Q99572 595 aaKnown RBP25.54■■□□□ 1.68
CHD9-208ENST00000563410 IL1RAPL2Q9NP60 686 aa25.54■■□□□ 1.68
CHD9-208ENST00000563410 ALPK3Q96L96 1907 aa25.54■■□□□ 1.68
CHD9-208ENST00000563410 NAV1Q8NEY1 1877 aa25.53■■□□□ 1.68
CHD9-208ENST00000563410 RANBP2P49792 3224 aaKnown RBP25.53■■□□□ 1.68
CHD9-208ENST00000563410 PEX10O60683 326 aa25.53■■□□□ 1.68
CHD9-208ENST00000563410 USP5P45974 858 aa25.53■■□□□ 1.68
CHD9-208ENST00000563410 FXR1P51114 621 aaKnown RBP eCLIP25.53■■□□□ 1.68
CHD9-208ENST00000563410 IRX3P78415 501 aaPredicted RBP25.53■■□□□ 1.68
CHD9-208ENST00000563410 MAP3K12Q12852 859 aa25.53■■□□□ 1.68
CHD9-208ENST00000563410 TATDN1Q6P1N9 297 aa25.53■■□□□ 1.68
CHD9-208ENST00000563410 FARP2O94887 1054 aaPredicted RBP25.52■■□□□ 1.68
CHD9-208ENST00000563410 TMED8Q6PL24 325 aaPredicted RBP25.52■■□□□ 1.68
CHD9-208ENST00000563410 DEFB118Q96PH6 123 aa25.52■■□□□ 1.68
CHD9-208ENST00000563410 HTATIP2Q9BUP3 242 aa25.52■■□□□ 1.68
CHD9-208ENST00000563410 TXNRD2Q9NNW7 524 aa25.52■■□□□ 1.68
CHD9-208ENST00000563410 EMILIN3Q9NT22 766 aa25.52■■□□□ 1.68
CHD9-208ENST00000563410 GH2P01242 217 aa25.51■■□□□ 1.67
CHD9-208ENST00000563410 HERVK_113P62684 666 aa25.51■■□□□ 1.67
CHD9-208ENST00000563410 HSP90AB4PQ58FF6 505 aa25.51■■□□□ 1.67
CHD9-208ENST00000563410 RIOK1Q9BRS2 568 aaKnown RBP25.51■■□□□ 1.67
CHD9-208ENST00000563410 EHD4Q9H223 541 aa25.51■■□□□ 1.67
CHD9-208ENST00000563410 CRISPLD2Q9H0B8 497 aa25.5■■□□□ 1.67
CHD9-208ENST00000563410 SERPINB13Q9UIV8 391 aa25.5■■□□□ 1.67
CHD9-208ENST00000563410 TFRCP02786 760 aaKnown RBP25.49■■□□□ 1.67
CHD9-208ENST00000563410 HMGCRP04035 888 aa25.49■■□□□ 1.67
CHD9-208ENST00000563410 MS4A1P11836 297 aa25.49■■□□□ 1.67
CHD9-208ENST00000563410 CAPN2P17655 700 aa25.49■■□□□ 1.67
CHD9-208ENST00000563410 POTEEQ6S8J3 1075 aa25.49■■□□□ 1.67
CHD9-208ENST00000563410 SIRT2Q8IXJ6 389 aa25.49■■□□□ 1.67
CHD9-208ENST00000563410 RBPJLQ9UBG7 517 aa25.49■■□□□ 1.67
CHD9-208ENST00000563410 SZT2Q5T011 3432 aa25.49■■□□□ 1.67
CHD9-208ENST00000563410 TRIM32Q13049 653 aa25.48■■□□□ 1.67
CHD9-208ENST00000563410 USP17L2Q6R6M4 530 aa25.48■■□□□ 1.67
CHD9-208ENST00000563410 RPAP2Q8IXW5 612 aaPredicted RBP25.48■■□□□ 1.67
CHD9-208ENST00000563410 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.48■■□□□ 1.671e-7■■■■■ 27.3
CHD9-208ENST00000563410 ZBTB40Q9NUA8 1239 aa25.48■■□□□ 1.67
CHD9-208ENST00000563410 PLCD1P51178 756 aa25.47■■□□□ 1.67
CHD9-208ENST00000563410 TTF1Q15361 905 aaPredicted RBP25.47■■□□□ 1.67
CHD9-208ENST00000563410 Q3C1V9 767 aa25.47■■□□□ 1.67
CHD9-208ENST00000563410 CHRDL2Q6WN34 429 aa25.47■■□□□ 1.67
CHD9-208ENST00000563410 TTC6Q86TZ1 520 aa25.47■■□□□ 1.67
CHD9-208ENST00000563410 GPRC5AQ8NFJ5 357 aa25.47■■□□□ 1.67
CHD9-208ENST00000563410 KIF1BPQ96EK5 621 aa25.47■■□□□ 1.67
CHD9-208ENST00000563410 COG6Q9Y2V7 657 aa25.47■■□□□ 1.67
CHD9-208ENST00000563410 APBB1O00213 710 aa25.46■■□□□ 1.67
CHD9-208ENST00000563410 PDE6AP16499 860 aa25.46■■□□□ 1.67
CHD9-208ENST00000563410 CLASRPQ8N2M8 674 aaKnown RBP25.46■■□□□ 1.67
CHD9-208ENST00000563410 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.46■■□□□ 1.67
CHD9-208ENST00000563410 TRIB2Q92519 343 aa25.46■■□□□ 1.67
CHD9-208ENST00000563410 C12orf42Q96LP6 360 aa25.46■■□□□ 1.67
CHD9-208ENST00000563410 DDX19BQ9UMR2 479 aa25.46■■□□□ 1.67
CHD9-208ENST00000563410 MYH8P13535 1937 aa25.45■■□□□ 1.67
CHD9-208ENST00000563410 MAGEB6P1A0A0J9YX57 407 aa25.45■■□□□ 1.66
CHD9-208ENST00000563410 SHMT1P34896 483 aa25.45■■□□□ 1.66
CHD9-208ENST00000563410 ERVK-9P63128 1117 aa25.45■■□□□ 1.66
CHD9-208ENST00000563410 ERVK-24P63145 666 aa25.45■■□□□ 1.66
CHD9-208ENST00000563410 CERKLQ49MI3 558 aaPredicted RBP25.45■■□□□ 1.66
CHD9-208ENST00000563410 SLC9C2Q5TAH2 1124 aa25.45■■□□□ 1.66
CHD9-208ENST00000563410 RPTORQ8N122 1335 aa25.44■■□□□ 1.66
CHD9-208ENST00000563410 MYH7P12883 1935 aa25.44■■□□□ 1.66
CHD9-208ENST00000563410 CYP2B6P20813 491 aa25.44■■□□□ 1.66
CHD9-208ENST00000563410 EVX2Q03828 476 aa25.44■■□□□ 1.66
CHD9-208ENST00000563410 ZYXQ15942 572 aaKnown RBP25.44■■□□□ 1.66
CHD9-208ENST00000563410 PORCNQ9H237 461 aa25.44■■□□□ 1.66
CHD9-208ENST00000563410 BAZ2AQ9UIF9 1905 aaKnown RBP25.43■■□□□ 1.66
CHD9-208ENST00000563410 ZNF532Q9HCE3 1301 aa25.43■■□□□ 1.66
CHD9-208ENST00000563410 TCRBV5S4A2TA0A5A2 114 aa25.43■■□□□ 1.66
CHD9-208ENST00000563410 GOLIM4O00461 696 aa25.43■■□□□ 1.66
CHD9-208ENST00000563410 HMMRO75330 724 aa25.43■■□□□ 1.66
CHD9-208ENST00000563410 GABPAQ06546 454 aa25.43■■□□□ 1.66
CHD9-208ENST00000563410 RAB3GAP1Q15042 981 aa25.43■■□□□ 1.66
CHD9-208ENST00000563410 ABCB5Q2M3G0 1257 aa25.43■■□□□ 1.66
CHD9-208ENST00000563410 ACER1Q8TDN7 264 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms