RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 PCP11498 1178 aaKnown RBP14.96□□□□□ -0.02
USB1-207ENST00000563149 PLCD1P51178 756 aa14.96□□□□□ -0.02
USB1-207ENST00000563149 EIF5P55010 431 aaKnown RBP14.96□□□□□ -0.02
USB1-207ENST00000563149 AKAP17AQ02040 695 aaKnown RBP14.96□□□□□ -0.02
USB1-207ENST00000563149 SUSD4Q5VX71 490 aa14.96□□□□□ -0.02
USB1-207ENST00000563149 UBXN4Q92575 508 aa14.96□□□□□ -0.02
USB1-207ENST00000563149 ESR2Q92731 530 aa14.96□□□□□ -0.02
USB1-207ENST00000563149 UBAC1Q9BSL1 405 aa14.96□□□□□ -0.02
USB1-207ENST00000563149 TOMM22Q9NS69 142 aa14.96□□□□□ -0.02
USB1-207ENST00000563149 PCDHB6Q9Y5E3 794 aa14.96□□□□□ -0.02
USB1-207ENST00000563149 COL22A1Q8NFW1 1626 aaPredicted RBP14.95□□□□□ -0.02
USB1-207ENST00000563149 VWA3AA6NCI4 1184 aa14.95□□□□□ -0.02
USB1-207ENST00000563149 UBE2Q2LH0YL09 131 aa14.95□□□□□ -0.02
USB1-207ENST00000563149 PRKAB2O43741 272 aa14.95□□□□□ -0.02
USB1-207ENST00000563149 NR1I3Q14994 352 aa14.95□□□□□ -0.02
USB1-207ENST00000563149 SEC23AQ15436 765 aa14.95□□□□□ -0.02
USB1-207ENST00000563149 MNS1Q8NEH6 495 aa14.95□□□□□ -0.02
USB1-207ENST00000563149 RBM28Q9NW13 759 aaKnown RBP14.95□□□□□ -0.02
USB1-207ENST00000563149 LRP2BPQ9P2M1 347 aa14.95□□□□□ -0.02
USB1-207ENST00000563149 SLIT2O94813 1529 aa14.95□□□□□ -0.02
USB1-207ENST00000563149 LAMB2P55268 1798 aa14.94□□□□□ -0.02
USB1-207ENST00000563149 TRIM75PA6NK02 468 aa14.94□□□□□ -0.02
USB1-207ENST00000563149 EXOC5O00471 708 aa14.94□□□□□ -0.02
USB1-207ENST00000563149 SEMA3EO15041 775 aa14.94□□□□□ -0.02
USB1-207ENST00000563149 PRPF3O43395 683 aaKnown RBP14.94□□□□□ -0.02
USB1-207ENST00000563149 SLFN14P0C7P3 912 aa14.94□□□□□ -0.02
USB1-207ENST00000563149 PRR29P0C7W0 189 aa14.94□□□□□ -0.02
USB1-207ENST00000563149 SPECC1Q5M775 1068 aa14.94□□□□□ -0.02
USB1-207ENST00000563149 TC2NQ8N9U0 490 aa14.94□□□□□ -0.02
USB1-207ENST00000563149 CDC5LQ99459 802 aaKnown RBP14.94□□□□□ -0.02
USB1-207ENST00000563149 BTG4Q9NY30 223 aa14.94□□□□□ -0.02
USB1-207ENST00000563149 RAI14Q9P0K7 980 aa14.94□□□□□ -0.02
USB1-207ENST00000563149 COL14A1Q05707 1796 aaKnown RBP14.94□□□□□ -0.02
USB1-207ENST00000563149 A0A1B0GTH6 734 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 URI1O94763 535 aaPredicted RBP14.93□□□□□ -0.02
USB1-207ENST00000563149 CALM1P0DP23 149 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 CALM2P0DP24 149 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 CALM3P0DP25 149 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 CASQ1P31415 396 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 KRT2P35908 639 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 BCAMP50895 628 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 GRIN1Q05586 938 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 FMR1Q06787 632 aaKnown RBP eCLIP14.93□□□□□ -0.02
USB1-207ENST00000563149 NR5A1Q13285 461 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 ARHGAP29Q52LW3 1261 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 SH3RF1Q7Z6J0 888 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 FERMT2Q96AC1 680 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 ZKSCAN3Q9BRR0 538 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 NAA15Q9BXJ9 866 aaKnown RBP14.93□□□□□ -0.02
USB1-207ENST00000563149 CSRNP2Q9H175 543 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 CABP5Q9NP86 173 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 TAOK2Q9UL54 1235 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 PARP3Q9Y6F1 533 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 TADA3O75528 432 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 CYP7A1P22680 504 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 TERF2Q15554 542 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 SPATA1Q5VX52 437 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 TMED8Q6PL24 325 aaPredicted RBP14.93□□□□□ -0.02
USB1-207ENST00000563149 NUP133Q8WUM0 1156 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 PANX2Q96RD6 677 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 CTAGE1Q96RT6 745 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 PHF20Q9BVI0 1012 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 BRMS1Q9HCU9 246 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 ZNF446Q9NWS9 450 aa14.93□□□□□ -0.02
USB1-207ENST00000563149 ZHX1Q9UKY1 873 aaPredicted RBP14.93□□□□□ -0.02
USB1-207ENST00000563149 TNKSO95271 1327 aa14.92□□□□□ -0.02
USB1-207ENST00000563149 MAGEB6P1A0A0J9YX57 407 aa14.92□□□□□ -0.02
USB1-207ENST00000563149 CLCN6P51797 869 aa14.92□□□□□ -0.02
USB1-207ENST00000563149 MAP3K9P80192 1104 aa14.92□□□□□ -0.02
USB1-207ENST00000563149 ZNF771Q7L3S4 317 aaPredicted RBP14.92□□□□□ -0.02
USB1-207ENST00000563149 PDILTQ8N807 584 aa14.92□□□□□ -0.02
USB1-207ENST00000563149 SYTL4Q96C24 671 aaPredicted RBP14.92□□□□□ -0.02
USB1-207ENST00000563149 GSDMAQ96QA5 445 aa14.92□□□□□ -0.02
USB1-207ENST00000563149 PYM1Q9BRP8 204 aaKnown RBP14.92□□□□□ -0.02
USB1-207ENST00000563149 SEC31BQ9NQW1 1179 aa14.92□□□□□ -0.02
USB1-207ENST00000563149 CCDC87Q9NVE4 849 aa14.92□□□□□ -0.02
USB1-207ENST00000563149 GNL3LQ9NVN8 582 aaKnown RBP14.92□□□□□ -0.02
USB1-207ENST00000563149 PHLPP1O60346 1717 aa14.92□□□□□ -0.02
USB1-207ENST00000563149 ZNF804BA4D1E1 1349 aa14.92□□□□□ -0.02
USB1-207ENST00000563149 RREB1Q92766 1687 aa14.92□□□□□ -0.02
USB1-207ENST00000563149 MYH6P13533 1939 aa14.92□□□□□ -0.02
USB1-207ENST00000563149 AKR1B15C9JRZ8 316 aaPredicted RBP14.91□□□□□ -0.02
USB1-207ENST00000563149 FGRP09769 529 aa14.91□□□□□ -0.02
USB1-207ENST00000563149 CHRNDQ07001 517 aa14.91□□□□□ -0.02
USB1-207ENST00000563149 TAF3Q5VWG9 929 aa14.91□□□□□ -0.02
USB1-207ENST00000563149 TMCO3Q6UWJ1 677 aa14.91□□□□□ -0.02
USB1-207ENST00000563149 CATIPQ7Z7H3 387 aa14.91□□□□□ -0.02
USB1-207ENST00000563149 OXER1Q8TDS5 423 aa14.91□□□□□ -0.02
USB1-207ENST00000563149 ZSCAN10Q96SZ4 725 aaPredicted RBP14.91□□□□□ -0.02
USB1-207ENST00000563149 BRIP1Q9BX63 1249 aa14.91□□□□□ -0.02
USB1-207ENST00000563149 ZRANB2O95218 330 aaKnown RBP eCLIP14.9□□□□□ -0.02
USB1-207ENST00000563149 FUT2Q10981 343 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 PKN1Q16512 942 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 INTS5Q6P9B9 1019 aaKnown RBP14.9□□□□□ -0.02
USB1-207ENST00000563149 GPR161Q8N6U8 529 aaKnown RBP14.9□□□□□ -0.02
USB1-207ENST00000563149 MIGA1Q8NAN2 632 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 LRRN4CLQ8ND94 238 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 CARD6Q9BX69 1037 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 BCL9LQ86UU0 1499 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 CICQ96RK0 1608 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms