RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 BAG6P46379 1132 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 SF3B2Q13435 895 aaKnown RBP10.93□□□□□ -0.66
LINC00838-201ENST00000562956 DCAF8Q5TAQ9 597 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 ATL3Q6DD88 541 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 RGS22Q8NE09 1264 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 LAMB1P07942 1786 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 A0A0U1RQG5 324 aaPredicted RBP10.92□□□□□ -0.66
LINC00838-201ENST00000562956 TFAP4Q01664 338 aa10.92□□□□□ -0.66
LINC00838-201ENST00000562956 BRAPQ7Z569 592 aa10.92□□□□□ -0.66
LINC00838-201ENST00000562956 AMOTL1Q8IY63 956 aa10.92□□□□□ -0.66
LINC00838-201ENST00000562956 C7orf43Q8WVR3 580 aa10.92□□□□□ -0.66
LINC00838-201ENST00000562956 TTF2Q9UNY4 1162 aaKnown RBP10.92□□□□□ -0.66
LINC00838-201ENST00000562956 SUGT1Q9Y2Z0 365 aa10.92□□□□□ -0.66
LINC00838-201ENST00000562956 NASPP49321 788 aaPredicted RBP10.92□□□□□ -0.66
LINC00838-201ENST00000562956 SCNN1DP51172 638 aa10.92□□□□□ -0.66
LINC00838-201ENST00000562956 MYSM1Q5VVJ2 828 aa10.92□□□□□ -0.66
LINC00838-201ENST00000562956 RCSD1Q6JBY9 416 aa10.92□□□□□ -0.66
LINC00838-201ENST00000562956 TRIM22Q8IYM9 498 aa10.92□□□□□ -0.66
LINC00838-201ENST00000562956 CNKSR1Q969H4 720 aa10.92□□□□□ -0.66
LINC00838-201ENST00000562956 MKNK2Q9HBH9 465 aa10.92□□□□□ -0.66
LINC00838-201ENST00000562956 IL17RBQ9NRM6 502 aa10.92□□□□□ -0.66
LINC00838-201ENST00000562956 CLIC4Q9Y696 253 aa10.92□□□□□ -0.66
LINC00838-201ENST00000562956 MYH2Q9UKX2 1941 aa10.92□□□□□ -0.66
LINC00838-201ENST00000562956 PLEKHA8P1O95397 391 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 RTEL1Q9NZ71 1219 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 DDAH1O94760 285 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 FUT2Q10981 343 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 TRIM29Q14134 588 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 PPP2R5BQ15173 497 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 PODNQ7Z5L7 613 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 BICD2Q8TD16 824 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 WASF1Q92558 559 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 TSPY26PQ9H489 355 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 DACT1Q9NYF0 836 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 USP17L3A6NCW0 530 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 USP17L4A6NCW7 530 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 NR1I2O75469 434 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 DEXIO95424 95 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 USP17L1Q7RTZ2 530 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 KCNJ14Q9UNX9 436 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 SLX4Q8IY92 1834 aa10.91□□□□□ -0.66
LINC00838-201ENST00000562956 hCG_1642624A0A1W2PR95 340 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 ESPNB1AK53 854 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 ECE2O60344 883 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 LETM1O95202 739 aaPredicted RBP10.9□□□□□ -0.66
LINC00838-201ENST00000562956 CALM1P0DP23 149 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 CALM2P0DP24 149 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 CALM3P0DP25 149 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 RASA1P20936 1047 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 U2AF2P26368 475 aaKnown RBP eCLIP10.9□□□□□ -0.66
LINC00838-201ENST00000562956 RBM10P98175 930 aaKnown RBP10.9□□□□□ -0.66
LINC00838-201ENST00000562956 CAMK4Q16566 473 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 LINC00301Q8NCQ3 95 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 TSPY3P0CV98 308 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 TSPY8P0CW00 308 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 ME1P48163 572 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 CDK8P49336 464 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 PICALMQ13492 652 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 AOC3Q16853 763 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 C16orf86Q6ZW13 317 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 RNF214Q8ND24 703 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.9□□□□□ -0.66
LINC00838-201ENST00000562956 RNF26Q9BY78 433 aaPredicted RBP10.9□□□□□ -0.66
LINC00838-201ENST00000562956 POLR3EQ9NVU0 708 aa10.9□□□□□ -0.66
LINC00838-201ENST00000562956 RBM28Q9NW13 759 aaKnown RBP10.9□□□□□ -0.66
LINC00838-201ENST00000562956 WDHD1O75717 1129 aaPredicted RBP10.89□□□□□ -0.67
LINC00838-201ENST00000562956 MMP1P03956 469 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 GNL2Q13823 731 aaKnown RBP10.89□□□□□ -0.67
LINC00838-201ENST00000562956 PKN1Q16512 942 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 TMTC3Q6ZXV5 915 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 DGKHQ86XP1 1220 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 ZNF444Q8N0Y2 327 aaPredicted RBP10.89□□□□□ -0.67
LINC00838-201ENST00000562956 SNED1Q8TER0 1413 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 SHISA4Q96DD7 197 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 TRIM44Q96DX7 344 aaPredicted RBP10.89□□□□□ -0.67
LINC00838-201ENST00000562956 GOLPH3LQ9H4A5 285 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 DDX4Q9NQI0 724 aaKnown RBP10.89□□□□□ -0.67
LINC00838-201ENST00000562956 PCDHA7Q9UN72 937 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 NAV1Q8NEY1 1877 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 QSER1Q2KHR3 1735 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 C21orf2O43822 256 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 APOBEC3HQ6NTF7 200 aaKnown RBP10.89□□□□□ -0.67
LINC00838-201ENST00000562956 CCAR1Q8IX12 1150 aaKnown RBP10.89□□□□□ -0.67
LINC00838-201ENST00000562956 SRBD1Q8N5C6 995 aaKnown RBP10.89□□□□□ -0.67
LINC00838-201ENST00000562956 NUP62CLQ9H1M0 184 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 KAT14Q9H8E8 782 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 USP40Q9NVE5 1235 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 V9GY48 417 aaPredicted RBP10.89□□□□□ -0.67
LINC00838-201ENST00000562956 C10orf71Q711Q0 1435 aa10.89□□□□□ -0.67
LINC00838-201ENST00000562956 BTBD18B2RXH4 712 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 NT5C2P49902 561 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 DACT2Q5SW24 774 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 STRIP1Q5VSL9 837 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 ANO1Q5XXA6 986 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 CTCFLQ8NI51 663 aaPredicted RBP10.88□□□□□ -0.67
LINC00838-201ENST00000562956 ANKS1AQ92625 1134 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 FUCA2Q9BTY2 467 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 TCP11L1Q9NUJ3 509 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 ECM29Q5VYK3 1845 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 DLEC1Q9Y238 1755 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms