RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 PTPRAP18433 802 aa19.45■□□□□ 0.7
USB1-206ENST00000562534 INHBEP58166 350 aa19.45■□□□□ 0.7
USB1-206ENST00000562534 RRP1BQ14684 758 aaKnown RBP19.45■□□□□ 0.7
USB1-206ENST00000562534 IMMTQ16891 758 aaKnown RBP19.45■□□□□ 0.7
USB1-206ENST00000562534 ABCB5Q2M3G0 1257 aa19.45■□□□□ 0.7
USB1-206ENST00000562534 WNK4Q96J92 1243 aa19.45■□□□□ 0.7
USB1-206ENST00000562534 ZHX2Q9Y6X8 837 aa19.45■□□□□ 0.7
USB1-206ENST00000562534 U3KPZ7 1027 aaPredicted RBP19.45■□□□□ 0.7
USB1-206ENST00000562534 NAV1Q8NEY1 1877 aa19.44■□□□□ 0.7
USB1-206ENST00000562534 USP17L5A8MUK1 530 aa19.44■□□□□ 0.7
USB1-206ENST00000562534 SMIM22K7EJ46 135 aa19.44■□□□□ 0.7
USB1-206ENST00000562534 PCP11498 1178 aaKnown RBP19.44■□□□□ 0.7
USB1-206ENST00000562534 PTH1RQ03431 593 aa19.44■□□□□ 0.7
USB1-206ENST00000562534 SLC44A5Q8NCS7 719 aa19.44■□□□□ 0.7
USB1-206ENST00000562534 BAZ2AQ9UIF9 1905 aaKnown RBP19.44■□□□□ 0.7
USB1-206ENST00000562534 ROBO3Q96MS0 1386 aa19.44■□□□□ 0.7
USB1-206ENST00000562534 GDF11O95390 407 aa19.43■□□□□ 0.7
USB1-206ENST00000562534 CTDSPL2Q05D32 466 aa19.43■□□□□ 0.7
USB1-206ENST00000562534 PPIL2Q13356 520 aa19.43■□□□□ 0.7
USB1-206ENST00000562534 STK11IPQ8N1F8 1099 aa19.43■□□□□ 0.7
USB1-206ENST00000562534 OTUD5Q96G74 571 aa19.43■□□□□ 0.7
USB1-206ENST00000562534 RNF41Q9H4P4 317 aaPredicted RBP19.43■□□□□ 0.7
USB1-206ENST00000562534 AS3MTQ9HBK9 375 aa19.43■□□□□ 0.7
USB1-206ENST00000562534 ANO2Q9NQ90 1003 aa19.43■□□□□ 0.7
USB1-206ENST00000562534 MANSC4A6NHS7 340 aaPredicted RBP19.42■□□□□ 0.7
USB1-206ENST00000562534 MPHOSPH10O00566 681 aaKnown RBP19.42■□□□□ 0.7
USB1-206ENST00000562534 CXCL11O14625 94 aa19.42■□□□□ 0.7
USB1-206ENST00000562534 EIF5BO60841 1220 aaKnown RBP19.42■□□□□ 0.7
USB1-206ENST00000562534 GH2P01242 217 aa19.42■□□□□ 0.7
USB1-206ENST00000562534 FGRP09769 529 aa19.42■□□□□ 0.7
USB1-206ENST00000562534 GTF2A2P52657 109 aa19.42■□□□□ 0.7
USB1-206ENST00000562534 MFSD6Q6ZSS7 791 aa19.42■□□□□ 0.7
USB1-206ENST00000562534 TMEM179Q6ZVK1 233 aa19.42■□□□□ 0.7
USB1-206ENST00000562534 ZBTB21Q9ULJ3 1066 aa19.42■□□□□ 0.7
USB1-206ENST00000562534 AFG3L2Q9Y4W6 797 aa19.42■□□□□ 0.7
USB1-206ENST00000562534 IRF6O14896 467 aa19.41■□□□□ 0.7
USB1-206ENST00000562534 RASA1P20936 1047 aa19.41■□□□□ 0.7
USB1-206ENST00000562534 NT5C2P49902 561 aa19.41■□□□□ 0.7
USB1-206ENST00000562534 JAG1P78504 1218 aa19.41■□□□□ 0.7
USB1-206ENST00000562534 KIF23Q02241 960 aaPredicted RBP19.41■□□□□ 0.7
USB1-206ENST00000562534 AKNAD1Q5T1N1 836 aa19.41■□□□□ 0.7
USB1-206ENST00000562534 CNKSR2Q8WXI2 1034 aa19.41■□□□□ 0.7
USB1-206ENST00000562534 WDR18Q9BV38 432 aa19.41■□□□□ 0.7
USB1-206ENST00000562534 LSG1Q9H089 658 aaKnown RBP19.41■□□□□ 0.7
USB1-206ENST00000562534 DDX60LQ5H9U9 1706 aaKnown RBP19.41■□□□□ 0.7
USB1-206ENST00000562534 SIPA1L1O43166 1804 aa19.4■□□□□ 0.7
USB1-206ENST00000562534 ORC4O43929 436 aa19.4■□□□□ 0.7
USB1-206ENST00000562534 AOC2O75106 756 aa19.4■□□□□ 0.7
USB1-206ENST00000562534 REC8O95072 547 aa19.4■□□□□ 0.7
USB1-206ENST00000562534 GJA5P36382 358 aa19.4■□□□□ 0.7
USB1-206ENST00000562534 HAND2P61296 217 aa19.4■□□□□ 0.7
USB1-206ENST00000562534 MKRN3Q13064 507 aaKnown RBP19.4■□□□□ 0.7
USB1-206ENST00000562534 SNAPC2Q13487 334 aa19.4■□□□□ 0.7
USB1-206ENST00000562534 RAB3GAP1Q15042 981 aa19.4■□□□□ 0.7
USB1-206ENST00000562534 ZNF280CQ8ND82 737 aa19.4■□□□□ 0.7
USB1-206ENST00000562534 KCNH4Q9UQ05 1017 aa19.4■□□□□ 0.7
USB1-206ENST00000562534 PRDM1O75626 825 aa19.39■□□□□ 0.69
USB1-206ENST00000562534 CETPP11597 493 aa19.39■□□□□ 0.69
USB1-206ENST00000562534 AKR1B1P15121 316 aa19.39■□□□□ 0.69
USB1-206ENST00000562534 TM4SF4P48230 202 aa19.39■□□□□ 0.69
USB1-206ENST00000562534 SREBF2Q12772 1141 aa19.39■□□□□ 0.69
USB1-206ENST00000562534 STAG1Q8WVM7 1258 aa19.39■□□□□ 0.69
USB1-206ENST00000562534 KANSL2Q9H9L4 492 aa19.39■□□□□ 0.69
USB1-206ENST00000562534 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.39■□□□□ 0.69
USB1-206ENST00000562534 RBM8AQ9Y5S9 174 aaKnown RBP19.39■□□□□ 0.69
USB1-206ENST00000562534 TESPA1A2RU30 521 aaPredicted RBP19.38■□□□□ 0.69
USB1-206ENST00000562534 C19orf81C9J6K1 198 aa19.38■□□□□ 0.69
USB1-206ENST00000562534 EPB41L2O43491 1005 aaKnown RBP19.38■□□□□ 0.69
USB1-206ENST00000562534 TSPY3P0CV98 308 aa19.38■□□□□ 0.69
USB1-206ENST00000562534 TSPY8P0CW00 308 aa19.38■□□□□ 0.69
USB1-206ENST00000562534 TFAP4Q01664 338 aa19.38■□□□□ 0.69
USB1-206ENST00000562534 MAP2K1Q02750 393 aaPredicted RBP19.38■□□□□ 0.69
USB1-206ENST00000562534 SPP2Q13103 211 aa19.38■□□□□ 0.69
USB1-206ENST00000562534 SEPT2Q15019 361 aa19.38■□□□□ 0.69
USB1-206ENST00000562534 MS4A4AQ96JQ5 239 aa19.38■□□□□ 0.69
USB1-206ENST00000562534 INCENPQ9NQS7 918 aa19.38■□□□□ 0.69
USB1-206ENST00000562534 TOMM22Q9NS69 142 aa19.38■□□□□ 0.69
USB1-206ENST00000562534 USP17L10C9JJH3 530 aa19.37■□□□□ 0.69
USB1-206ENST00000562534 RANBP6O60518 1105 aaKnown RBP19.37■□□□□ 0.69
USB1-206ENST00000562534 GUCY1A2P33402 732 aa19.37■□□□□ 0.69
USB1-206ENST00000562534 NECTIN1Q15223 517 aa19.37■□□□□ 0.69
USB1-206ENST00000562534 PPP4R3BQ5MIZ7 849 aa19.37■□□□□ 0.69
USB1-206ENST00000562534 RNF20Q5VTR2 975 aa19.37■□□□□ 0.69
USB1-206ENST00000562534 OTUD7BQ6GQQ9 843 aa19.37■□□□□ 0.69
USB1-206ENST00000562534 FASTKD5Q7L8L6 764 aaKnown RBP19.37■□□□□ 0.69
USB1-206ENST00000562534 JMYQ8N9B5 988 aa19.37■□□□□ 0.69
USB1-206ENST00000562534 NEDD1Q8NHV4 660 aa19.37■□□□□ 0.69
USB1-206ENST00000562534 ZIC5Q96T25 663 aa19.37■□□□□ 0.69
USB1-206ENST00000562534 CNNM2Q9H8M5 875 aa19.37■□□□□ 0.69
USB1-206ENST00000562534 TRIM75PA6NK02 468 aa19.36■□□□□ 0.69
USB1-206ENST00000562534 TSPY2A6NKD2 308 aa19.36■□□□□ 0.69
USB1-206ENST00000562534 CYP21A2P08686 494 aa19.36■□□□□ 0.69
USB1-206ENST00000562534 SHROOM1Q2M3G4 852 aaPredicted RBP19.36■□□□□ 0.69
USB1-206ENST00000562534 ESR2Q92731 530 aa19.36■□□□□ 0.69
USB1-206ENST00000562534 KRT23Q9C075 422 aa19.36■□□□□ 0.69
USB1-206ENST00000562534 NBPF3Q9H094 633 aa19.36■□□□□ 0.69
USB1-206ENST00000562534 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.36■□□□□ 0.69
USB1-206ENST00000562534 BACE1P56817 501 aa19.35■□□□□ 0.69
USB1-206ENST00000562534 TRDNQ13061 729 aa19.35■□□□□ 0.69
USB1-206ENST00000562534 FAM47AQ5JRC9 791 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms