RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 MBD4O95243 580 aa13.42□□□□□ -0.26
LPCAT4-202ENST00000562404 HLA-DOAP06340 250 aa13.42□□□□□ -0.26
LPCAT4-202ENST00000562404 SHMT1P34896 483 aa13.42□□□□□ -0.26
LPCAT4-202ENST00000562404 GABPAQ06546 454 aa13.42□□□□□ -0.26
LPCAT4-202ENST00000562404 PI4K2BQ8TCG2 481 aa13.42□□□□□ -0.26
LPCAT4-202ENST00000562404 EHD4Q9H223 541 aa13.42□□□□□ -0.26
LPCAT4-202ENST00000562404 AGTPBP1Q9UPW5 1226 aa13.42□□□□□ -0.26
LPCAT4-202ENST00000562404 PTCH2Q9Y6C5 1203 aa13.42□□□□□ -0.26
LPCAT4-202ENST00000562404 RBBP6Q7Z6E9 1792 aaKnown RBP13.42□□□□□ -0.26
LPCAT4-202ENST00000562404 CYP2D7A0A087X1C5 515 aa13.41□□□□□ -0.26
LPCAT4-202ENST00000562404 GH2P01242 217 aa13.41□□□□□ -0.26
LPCAT4-202ENST00000562404 ASNSP08243 561 aa13.41□□□□□ -0.26
LPCAT4-202ENST00000562404 MTMR2Q13614 643 aa13.41□□□□□ -0.26
LPCAT4-202ENST00000562404 UBE3CQ15386 1083 aa13.41□□□□□ -0.26
LPCAT4-202ENST00000562404 SH3D19Q5HYK7 790 aa13.41□□□□□ -0.26
LPCAT4-202ENST00000562404 SLC44A5Q8NCS7 719 aa13.41□□□□□ -0.26
LPCAT4-202ENST00000562404 TRIM47Q96LD4 638 aa13.41□□□□□ -0.26
LPCAT4-202ENST00000562404 PARK7Q99497 189 aaKnown RBP13.41□□□□□ -0.26
LPCAT4-202ENST00000562404 WDR18Q9BV38 432 aa13.41□□□□□ -0.26
LPCAT4-202ENST00000562404 CRNKL1Q9BZJ0 848 aaKnown RBP13.41□□□□□ -0.26
LPCAT4-202ENST00000562404 MCM9Q9NXL9 1143 aa13.41□□□□□ -0.26
LPCAT4-202ENST00000562404 SERPINB13Q9UIV8 391 aa13.41□□□□□ -0.26
LPCAT4-202ENST00000562404 MKI67P46013 3256 aaKnown RBP13.4□□□□□ -0.26
LPCAT4-202ENST00000562404 PEX10O60683 326 aa13.4□□□□□ -0.26
LPCAT4-202ENST00000562404 GUCY1A2P33402 732 aa13.4□□□□□ -0.26
LPCAT4-202ENST00000562404 BACE1P56817 501 aa13.4□□□□□ -0.26
LPCAT4-202ENST00000562404 TTC6Q86TZ1 520 aa13.4□□□□□ -0.26
LPCAT4-202ENST00000562404 KBTBD3Q8NAB2 608 aa13.4□□□□□ -0.26
LPCAT4-202ENST00000562404 PROCA1Q8NCQ7 364 aaPredicted RBP13.4□□□□□ -0.26
LPCAT4-202ENST00000562404 EXOC6Q8TAG9 804 aa13.4□□□□□ -0.26
LPCAT4-202ENST00000562404 OSBP2Q969R2 916 aa13.4□□□□□ -0.26
LPCAT4-202ENST00000562404 DYNLL2Q96FJ2 89 aa13.4□□□□□ -0.26
LPCAT4-202ENST00000562404 TRIM34Q9BYJ4 488 aa13.4□□□□□ -0.26
LPCAT4-202ENST00000562404 SLC45A1Q9Y2W3 748 aa13.4□□□□□ -0.26
LPCAT4-202ENST00000562404 PLXNB2O15031 1838 aa13.39□□□□□ -0.27
LPCAT4-202ENST00000562404 POLR3DP05423 398 aaPredicted RBP13.39□□□□□ -0.27
LPCAT4-202ENST00000562404 OSBPP22059 807 aa13.39□□□□□ -0.27
LPCAT4-202ENST00000562404 PSMC4P43686 418 aa13.39□□□□□ -0.27
LPCAT4-202ENST00000562404 HDAC1Q13547 482 aaPredicted RBP13.39□□□□□ -0.27
LPCAT4-202ENST00000562404 CERKLQ49MI3 558 aaPredicted RBP13.39□□□□□ -0.27
LPCAT4-202ENST00000562404 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
LPCAT4-202ENST00000562404 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.39□□□□□ -0.275e-7■■■■■ 42.7
LPCAT4-202ENST00000562404 AS3MTQ9HBK9 375 aa13.39□□□□□ -0.27
LPCAT4-202ENST00000562404 EMILIN3Q9NT22 766 aa13.39□□□□□ -0.27
LPCAT4-202ENST00000562404 POTEFA5A3E0 1075 aa13.38□□□□□ -0.27
LPCAT4-202ENST00000562404 IGHDP01880 384 aa13.38□□□□□ -0.27
LPCAT4-202ENST00000562404 ANKRD45Q5TZF3 282 aa13.38□□□□□ -0.27
LPCAT4-202ENST00000562404 POTEEQ6S8J3 1075 aa13.38□□□□□ -0.27
LPCAT4-202ENST00000562404 ANKRD13CQ8N6S4 541 aa13.38□□□□□ -0.27
LPCAT4-202ENST00000562404 ACER1Q8TDN7 264 aa13.38□□□□□ -0.27
LPCAT4-202ENST00000562404 ARMC5Q96C12 935 aa13.38□□□□□ -0.27
LPCAT4-202ENST00000562404 STRBPQ96SI9 672 aaKnown RBP13.38□□□□□ -0.27
LPCAT4-202ENST00000562404 ASCC2Q9H1I8 757 aaPredicted RBP13.38□□□□□ -0.27
LPCAT4-202ENST00000562404 GABRQQ9UN88 632 aa13.38□□□□□ -0.27
LPCAT4-202ENST00000562404 SLC4A4Q9Y6R1 1079 aa13.38□□□□□ -0.27
LPCAT4-202ENST00000562404 RLFQ13129 1914 aa13.38□□□□□ -0.27
LPCAT4-202ENST00000562404 TTC41PQ6P2S7 1318 aa13.38□□□□□ -0.27
LPCAT4-202ENST00000562404 GREB1LQ9C091 1923 aaPredicted RBP13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 USP17L10C9JJH3 530 aa13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 USP17L12C9JPN9 530 aa13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 USP17L21D6R901 530 aa13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 M0R2C6 588 aa13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 MLLT1Q03111 559 aaPredicted RBP13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 SEPT2Q15019 361 aa13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 RAB3GAP1Q15042 981 aa13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 ZYXQ15942 572 aaKnown RBP13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 ABCB5Q2M3G0 1257 aa13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 C12orf60Q5U649 245 aa13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 SH3TC2Q8TF17 1288 aa13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 GPATCH3Q96I76 525 aa13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 SEC62Q99442 399 aaKnown RBP13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 ATP8A2Q9NTI2 1148 aa13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 GINM1Q9NU53 330 aa13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 SRRDQ9UH36 339 aa13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 SUPT16HQ9Y5B9 1047 aaKnown RBP13.37□□□□□ -0.27
LPCAT4-202ENST00000562404 PARP14Q460N5 1801 aa13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 A0A1W2PRG0 241 aa13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 GSG1L2A8MUP6 293 aa13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 RNF113AO15541 343 aaKnown RBP13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 FMNL1O95466 1100 aaPredicted RBP13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 MX1P20591 662 aa13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 KIF22Q14807 665 aa13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 ZSCAN25Q6NSZ9 544 aa13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 CTR9Q6PD62 1173 aa13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 CLEC10AQ8IUN9 316 aa13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 SMCR8Q8TEV9 937 aaPredicted RBP13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 APPBP2Q92624 585 aa13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 ZNF333Q96JL9 665 aa13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 P2RX7Q99572 595 aaKnown RBP13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 EPB41L4AQ9HCS5 686 aaPredicted RBP13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 PDE4DIPQ5VU43 2346 aa13.36□□□□□ -0.27
LPCAT4-202ENST00000562404 C19orf81C9J6K1 198 aa13.35□□□□□ -0.27
LPCAT4-202ENST00000562404 MYCP01106 439 aaPredicted RBP13.35□□□□□ -0.27
LPCAT4-202ENST00000562404 AKR1B1P15121 316 aa13.35□□□□□ -0.27
LPCAT4-202ENST00000562404 HOXA7P31268 230 aaPredicted RBP13.35□□□□□ -0.27
LPCAT4-202ENST00000562404 PRKCZQ05513 592 aa13.35□□□□□ -0.27
LPCAT4-202ENST00000562404 SIAH1Q8IUQ4 282 aa13.35□□□□□ -0.27
LPCAT4-202ENST00000562404 SMC5Q8IY18 1101 aa13.35□□□□□ -0.27
LPCAT4-202ENST00000562404 GCC1Q96CN9 775 aa13.35□□□□□ -0.27
LPCAT4-202ENST00000562404 TXNRD2Q9NNW7 524 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms