RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 NACAP1Q9BZK3 213 aa16.05■□□□□ 0.16
CDH1-204ENST00000562118 FGAP02671 866 aa16.04■□□□□ 0.16
CDH1-204ENST00000562118 MOGSQ13724 837 aa16.04■□□□□ 0.16
CDH1-204ENST00000562118 CRACR2BQ8N4Y2 399 aaPredicted RBP16.04■□□□□ 0.16
CDH1-204ENST00000562118 AFG3L2Q9Y4W6 797 aa16.04■□□□□ 0.16
CDH1-204ENST00000562118 ASNSP08243 561 aa16.03■□□□□ 0.16
CDH1-204ENST00000562118 GUCY1A2P33402 732 aa16.03■□□□□ 0.16
CDH1-204ENST00000562118 TDO2P48775 406 aa16.03■□□□□ 0.16
CDH1-204ENST00000562118 CDK8P49336 464 aa16.03■□□□□ 0.16
CDH1-204ENST00000562118 SHROOM1Q2M3G4 852 aaPredicted RBP16.03■□□□□ 0.16
CDH1-204ENST00000562118 SLC4A8Q2Y0W8 1093 aa16.03■□□□□ 0.16
CDH1-204ENST00000562118 SLC44A5Q8NCS7 719 aa16.03■□□□□ 0.16
CDH1-204ENST00000562118 RUFY2Q8WXA3 655 aa16.03■□□□□ 0.16
CDH1-204ENST00000562118 DYNLL2Q96FJ2 89 aa16.03■□□□□ 0.16
CDH1-204ENST00000562118 WDR18Q9BV38 432 aa16.03■□□□□ 0.16
CDH1-204ENST00000562118 CFHR5Q9BXR6 569 aa16.03■□□□□ 0.16
CDH1-204ENST00000562118 NAPBQ9H115 298 aa16.03■□□□□ 0.16
CDH1-204ENST00000562118 WBP1LQ9NX94 342 aa16.03■□□□□ 0.16
CDH1-204ENST00000562118 ZBTB21Q9ULJ3 1066 aa16.03■□□□□ 0.16
CDH1-204ENST00000562118 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.03■□□□□ 0.16
CDH1-204ENST00000562118 MANSC4A6NHS7 340 aaPredicted RBP16.02■□□□□ 0.16
CDH1-204ENST00000562118 CXCL11O14625 94 aa16.02■□□□□ 0.16
CDH1-204ENST00000562118 IRF6O14896 467 aa16.02■□□□□ 0.16
CDH1-204ENST00000562118 INHBEP58166 350 aa16.02■□□□□ 0.16
CDH1-204ENST00000562118 KIF23Q02241 960 aaPredicted RBP16.02■□□□□ 0.16
CDH1-204ENST00000562118 PPARAQ07869 468 aa16.02■□□□□ 0.16
CDH1-204ENST00000562118 AMOTL1Q8IY63 956 aa16.02■□□□□ 0.16
CDH1-204ENST00000562118 CCDC17Q96LX7 622 aa16.02■□□□□ 0.16
CDH1-204ENST00000562118 NBPF3Q9H094 633 aa16.02■□□□□ 0.16
CDH1-204ENST00000562118 TACC3Q9Y6A5 838 aa16.02■□□□□ 0.16
CDH1-204ENST00000562118 A0A0G2JLL6 359 aaPredicted RBP16.01■□□□□ 0.15
CDH1-204ENST00000562118 RASA1P20936 1047 aa16.01■□□□□ 0.15
CDH1-204ENST00000562118 GTF2A2P52657 109 aa16.01■□□□□ 0.15
CDH1-204ENST00000562118 CERKLQ49MI3 558 aaPredicted RBP16.01■□□□□ 0.15
CDH1-204ENST00000562118 SH3D19Q5HYK7 790 aa16.01■□□□□ 0.15
CDH1-204ENST00000562118 PRRT2Q7Z6L0 340 aaPredicted RBP16.01■□□□□ 0.15
CDH1-204ENST00000562118 OTUD5Q96G74 571 aa16.01■□□□□ 0.15
CDH1-204ENST00000562118 ESYT1Q9BSJ8 1104 aa16.01■□□□□ 0.15
CDH1-204ENST00000562118 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.01■□□□□ 0.15
CDH1-204ENST00000562118 ZCCHC17Q9NP64 241 aaKnown RBP16.01■□□□□ 0.15
CDH1-204ENST00000562118 PICK1Q9NRD5 415 aa16.01■□□□□ 0.15
CDH1-204ENST00000562118 SAGE1Q9NXZ1 904 aa16.01■□□□□ 0.15
CDH1-204ENST00000562118 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.01■□□□□ 0.15
CDH1-204ENST00000562118 PARP14Q460N5 1801 aa16.01■□□□□ 0.15
CDH1-204ENST00000562118 MYH4Q9Y623 1939 aa16■□□□□ 0.15
CDH1-204ENST00000562118 IGKV6D-41A0A0C4DH26 115 aa16■□□□□ 0.15
CDH1-204ENST00000562118 USP17L5A8MUK1 530 aa16■□□□□ 0.15
CDH1-204ENST00000562118 APPP05067 770 aa16■□□□□ 0.15
CDH1-204ENST00000562118 NT5C2P49902 561 aa16■□□□□ 0.15
CDH1-204ENST00000562118 MAP2K1Q02750 393 aaPredicted RBP16■□□□□ 0.15
CDH1-204ENST00000562118 SREBF2Q12772 1141 aa16■□□□□ 0.15
CDH1-204ENST00000562118 PAXIP1Q6ZW49 1069 aaPredicted RBP16■□□□□ 0.15
CDH1-204ENST00000562118 PTPN18Q99952 460 aa16■□□□□ 0.15
CDH1-204ENST00000562118 TRIM34Q9BYJ4 488 aa16■□□□□ 0.15
CDH1-204ENST00000562118 ORC4O43929 436 aa15.99■□□□□ 0.15
CDH1-204ENST00000562118 CDC45O75419 566 aa15.99■□□□□ 0.15
CDH1-204ENST00000562118 GDF11O95390 407 aa15.99■□□□□ 0.15
CDH1-204ENST00000562118 GH2P01242 217 aa15.99■□□□□ 0.15
CDH1-204ENST00000562118 PCP11498 1178 aaKnown RBP15.99■□□□□ 0.15
CDH1-204ENST00000562118 NOVP48745 357 aa15.99■□□□□ 0.15
CDH1-204ENST00000562118 SNAPC2Q13487 334 aa15.99■□□□□ 0.15
CDH1-204ENST00000562118 ABCB5Q2M3G0 1257 aa15.99■□□□□ 0.15
CDH1-204ENST00000562118 TMEM179Q6ZVK1 233 aa15.99■□□□□ 0.15
CDH1-204ENST00000562118 ZNF280CQ8ND82 737 aa15.99■□□□□ 0.15
CDH1-204ENST00000562118 BRI3BPQ8WY22 251 aa15.99■□□□□ 0.15
CDH1-204ENST00000562118 MAP4K1Q92918 833 aa15.99■□□□□ 0.15
CDH1-204ENST00000562118 LSG1Q9H089 658 aaKnown RBP15.99■□□□□ 0.15
CDH1-204ENST00000562118 ZHX2Q9Y6X8 837 aa15.99■□□□□ 0.15
CDH1-204ENST00000562118 RLFQ13129 1914 aa15.99■□□□□ 0.15
CDH1-204ENST00000562118 MINDY4BA8MYZ0 360 aa15.98■□□□□ 0.15
CDH1-204ENST00000562118 IGF2BP3O00425 579 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDH1-204ENST00000562118 CETPP11597 493 aa15.98■□□□□ 0.15
CDH1-204ENST00000562118 AKR1B1P15121 316 aa15.98■□□□□ 0.15
CDH1-204ENST00000562118 PTH1RQ03431 593 aa15.98■□□□□ 0.15
CDH1-204ENST00000562118 IFNL1Q8IU54 200 aa15.98■□□□□ 0.15
CDH1-204ENST00000562118 SIAH1Q8IUQ4 282 aa15.98■□□□□ 0.15
CDH1-204ENST00000562118 STAG1Q8WVM7 1258 aa15.98■□□□□ 0.15
CDH1-204ENST00000562118 C12orf42Q96LP6 360 aa15.98■□□□□ 0.15
CDH1-204ENST00000562118 ZNF287Q9HBT7 754 aa15.98■□□□□ 0.15
CDH1-204ENST00000562118 CA12O43570 354 aa15.97■□□□□ 0.15
CDH1-204ENST00000562118 NOM1Q5C9Z4 860 aaKnown RBP15.97■□□□□ 0.15
CDH1-204ENST00000562118 GPAT2Q6NUI2 795 aa15.97■□□□□ 0.15
CDH1-204ENST00000562118 CCDC84Q86UT8 332 aaPredicted RBP15.97■□□□□ 0.15
CDH1-204ENST00000562118 PROCA1Q8NCQ7 364 aaPredicted RBP15.97■□□□□ 0.15
CDH1-204ENST00000562118 AS3MTQ9HBK9 375 aa15.97■□□□□ 0.15
CDH1-204ENST00000562118 SLC45A1Q9Y2W3 748 aa15.97■□□□□ 0.15
CDH1-204ENST00000562118 A0A0G2JMZ2 1700 aa15.97■□□□□ 0.15
CDH1-204ENST00000562118 SLC3A2P08195 630 aaKnown RBP15.96■□□□□ 0.15
CDH1-204ENST00000562118 BACE1P56817 501 aa15.96■□□□□ 0.15
CDH1-204ENST00000562118 PDE4BQ07343 736 aa15.96■□□□□ 0.15
CDH1-204ENST00000562118 MKRN3Q13064 507 aaKnown RBP15.96■□□□□ 0.15
CDH1-204ENST00000562118 ANKRD23Q86SG2 305 aa15.96■□□□□ 0.15
CDH1-204ENST00000562118 TBC1D10CQ8IV04 446 aa15.96■□□□□ 0.15
CDH1-204ENST00000562118 KIAA1683Q9H0B3 1180 aa15.96■□□□□ 0.15
CDH1-204ENST00000562118 CTNNA3Q9UI47 895 aa15.96■□□□□ 0.15
CDH1-204ENST00000562118 SYNPO2Q9UMS6 1093 aa15.96■□□□□ 0.15
CDH1-204ENST00000562118 ADGRA2Q96PE1 1338 aa15.95■□□□□ 0.14
CDH1-204ENST00000562118 CCL15-CCL14A0A0B4J2E2 113 aa15.95■□□□□ 0.14
CDH1-204ENST00000562118 C19orf81C9J6K1 198 aa15.95■□□□□ 0.14
CDH1-204ENST00000562118 ALDH1A1P00352 501 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms