RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 FOXR1Q6PIV2 292 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 ANKRD23Q86SG2 305 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 CCDC170Q8IYT3 715 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 CYP4X1Q8N118 509 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 ENGASEQ8NFI3 743 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 SYMPKQ92797 1274 aaKnown RBP8.26□□□□□ -1.09
CDH1-203ENST00000561751 N4BP2L2Q92802 583 aaPredicted RBP8.26□□□□□ -1.09
CDH1-203ENST00000561751 STK31Q9BXU1 1019 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 GPCPD1Q9NPB8 672 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 KLC4Q9NSK0 619 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 CPSF2Q9P2I0 782 aaKnown RBP8.26□□□□□ -1.09
CDH1-203ENST00000561751 AMOTL2Q9Y2J4 779 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 PPP2R2CQ9Y2T4 447 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 CYP46A1Q9Y6A2 500 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 ADGRB1O14514 1584 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 EVC2Q86UK5 1308 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 ADGRF5Q8IZF2 1346 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 CDHR2Q9BYE9 1310 aa8.26□□□□□ -1.09
CDH1-203ENST00000561751 GOLGA6L7A0A1B0GV03 622 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 EIF3HO15372 352 aaKnown RBP eCLIP8.25□□□□□ -1.09
CDH1-203ENST00000561751 MYBL2P10244 700 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 RXRBP28702 533 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 CCT4P50991 539 aaKnown RBP8.25□□□□□ -1.09
CDH1-203ENST00000561751 USP46P62068 366 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 GNL2Q13823 731 aaKnown RBP8.25□□□□□ -1.09
CDH1-203ENST00000561751 NFE2L2Q16236 605 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 KIAA0753Q2KHM9 967 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 MEX3CQ5U5Q3 659 aaKnown RBP8.25□□□□□ -1.09
CDH1-203ENST00000561751 CCDC73Q6ZRK6 1079 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 ELOA2Q8IYF1 753 aaPredicted RBP8.25□□□□□ -1.09
CDH1-203ENST00000561751 FAM76AQ8TAV0 307 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 CCHCR1Q8TD31 782 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 SMARCC1Q92922 1105 aaPredicted RBP8.25□□□□□ -1.09
CDH1-203ENST00000561751 SAAL1Q96ER3 474 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 BORCS6Q96GS4 357 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 CALR3Q96L12 384 aaKnown RBP8.25□□□□□ -1.09
CDH1-203ENST00000561751 OSBPL9Q96SU4 736 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 SH3GL2Q99962 352 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 LRRCC1Q9C099 1032 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 LSG1Q9H089 658 aaKnown RBP8.25□□□□□ -1.09
CDH1-203ENST00000561751 BICC1Q9H694 974 aaKnown RBP8.25□□□□□ -1.09
CDH1-203ENST00000561751 ANAPC4Q9UJX5 808 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 TCHHQ07283 1943 aa8.25□□□□□ -1.09
CDH1-203ENST00000561751 MYO5BQ9ULV0 1848 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 KDM6AO15550 1401 aaPredicted RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 ADAMTS13Q76LX8 1427 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 PDLIM1O00151 329 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 WNT7AO00755 349 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 AHCYL1O43865 530 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 OPA1O60313 960 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 DIAPH1O60610 1272 aaKnown RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 KINO60870 393 aaKnown RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 SYF2O95926 243 aaKnown RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 FESP07332 822 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 ATP5JP18859 108 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 LIG3P49916 1009 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 RPS6KA3P51812 740 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 CDR1P51861 262 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 GNG11P61952 73 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 APBA1Q02410 837 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 ACTN3Q08043 901 aaPredicted RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 TBX2Q13207 712 aaPredicted RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 MCM6Q14566 821 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 TWISTNBQ3B726 338 aaPredicted RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 CDCA2Q69YH5 1023 aaPredicted RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 NAIF1Q69YI7 327 aaPredicted RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 NAA16Q6N069 864 aaPredicted RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 CWC27Q6UX04 472 aaKnown RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 CRELD2Q6UXH1 353 aaPredicted RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 C11orf57Q6ZUT1 292 aaPredicted RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 UBE3BQ7Z3V4 1068 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 TMC6Q7Z403 805 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 ARHGEF25Q86VW2 580 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 CCDC83Q8IWF9 413 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 ZFAND2BQ8WV99 257 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 RSRC1Q96IZ7 334 aaKnown RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 PGBD1Q96JS3 809 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 ZNF396Q96N95 335 aaPredicted RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 LLPHQ9BRT6 129 aaKnown RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 SUDS3Q9H7L9 328 aaPredicted RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 VCPKMTQ9H867 229 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 ABCB6Q9NP58 842 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 SNRKQ9NRH2 765 aa8.24□□□□□ -1.09
CDH1-203ENST00000561751 IQSEC3Q9UPP2 1182 aaPredicted RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 USP42Q9H9J4 1324 aaKnown RBP8.24□□□□□ -1.09
CDH1-203ENST00000561751 CEMIPQ8WUJ3 1361 aa8.23□□□□□ -1.09
CDH1-203ENST00000561751 H7C1W4 665 aa8.23□□□□□ -1.09
CDH1-203ENST00000561751 ABLIM1O14639 778 aa8.23□□□□□ -1.09
CDH1-203ENST00000561751 PPFIA2O75334 1257 aa8.23□□□□□ -1.09
CDH1-203ENST00000561751 SMPD1P17405 629 aa8.23□□□□□ -1.09
CDH1-203ENST00000561751 NLRP12P59046 1061 aa8.23□□□□□ -1.09
CDH1-203ENST00000561751 G3BP1Q13283 466 aaKnown RBP eCLIP8.23□□□□□ -1.09
CDH1-203ENST00000561751 SNCBQ16143 134 aa8.23□□□□□ -1.09
CDH1-203ENST00000561751 FOXD4L6Q3SYB3 417 aaPredicted RBP8.23□□□□□ -1.09
CDH1-203ENST00000561751 PLEKHO1Q53GL0 409 aaPredicted RBP8.23□□□□□ -1.09
CDH1-203ENST00000561751 CEP85LQ5SZL2 805 aa8.23□□□□□ -1.09
CDH1-203ENST00000561751 CPLX2Q6PUV4 134 aaKnown RBP8.23□□□□□ -1.09
CDH1-203ENST00000561751 FOXD4L3Q6VB84 417 aaPredicted RBP8.23□□□□□ -1.09
CDH1-203ENST00000561751 VSTM4Q8IW00 320 aa8.23□□□□□ -1.09
CDH1-203ENST00000561751 MFN1Q8IWA4 741 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms