RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 ANKRD45Q5TZF3 282 aa28.73■■■□□ 2.19
CDR2-202ENST00000561630 ATP8A2Q9NTI2 1148 aa28.73■■■□□ 2.19
CDR2-202ENST00000561630 PTPN22Q9Y2R2 807 aa28.73■■■□□ 2.19
CDR2-202ENST00000561630 PRKAB2O43741 272 aa28.72■■■□□ 2.19
CDR2-202ENST00000561630 GABPAQ06546 454 aa28.72■■■□□ 2.19
CDR2-202ENST00000561630 KIF22Q14807 665 aa28.72■■■□□ 2.19
CDR2-202ENST00000561630 PI4K2BQ8TCG2 481 aa28.72■■■□□ 2.19
CDR2-202ENST00000561630 PUS7LQ9H0K6 701 aaKnown RBP28.72■■■□□ 2.19
CDR2-202ENST00000561630 ZBTB47Q9UFB7 747 aaPredicted RBP28.72■■■□□ 2.19
CDR2-202ENST00000561630 GLRX3O76003 335 aaKnown RBP28.71■■■□□ 2.19
CDR2-202ENST00000561630 MX1P20591 662 aa28.71■■■□□ 2.19
CDR2-202ENST00000561630 SHMT1P34896 483 aa28.71■■■□□ 2.19
CDR2-202ENST00000561630 BACE1P56817 501 aa28.71■■■□□ 2.19
CDR2-202ENST00000561630 TREML2Q5T2D2 321 aa28.71■■■□□ 2.19
CDR2-202ENST00000561630 SALL3Q9BXA9 1300 aa28.7■■■□□ 2.19
CDR2-202ENST00000561630 DDX60LQ5H9U9 1706 aaKnown RBP28.7■■■□□ 2.19
CDR2-202ENST00000561630 GH2P01242 217 aa28.7■■■□□ 2.18
CDR2-202ENST00000561630 BCRP11274 1271 aa28.7■■■□□ 2.18
CDR2-202ENST00000561630 CERKLQ49MI3 558 aaPredicted RBP28.7■■■□□ 2.18
CDR2-202ENST00000561630 EXOC6Q8TAG9 804 aa28.7■■■□□ 2.18
CDR2-202ENST00000561630 ARHGAP39Q9C0H5 1083 aa28.7■■■□□ 2.18
CDR2-202ENST00000561630 MYH1P12882 1939 aa28.69■■■□□ 2.18
CDR2-202ENST00000561630 MTMR2Q13614 643 aa28.69■■■□□ 2.18
CDR2-202ENST00000561630 SUPT16HQ9Y5B9 1047 aaKnown RBP28.69■■■□□ 2.18
CDR2-202ENST00000561630 RNF113AO15541 343 aaKnown RBP28.68■■■□□ 2.18
CDR2-202ENST00000561630 GNRH1P01148 92 aa28.68■■■□□ 2.18
CDR2-202ENST00000561630 ZFYP08048 801 aaPredicted RBP28.68■■■□□ 2.18
CDR2-202ENST00000561630 RGS19P49795 217 aa28.68■■■□□ 2.18
CDR2-202ENST00000561630 EVX2Q03828 476 aa28.68■■■□□ 2.18
CDR2-202ENST00000561630 RWDD1Q9H446 243 aaPredicted RBP28.68■■■□□ 2.18
CDR2-202ENST00000561630 TAOK2Q9UL54 1235 aa28.68■■■□□ 2.18
CDR2-202ENST00000561630 SLC4A4Q9Y6R1 1079 aa28.68■■■□□ 2.18
CDR2-202ENST00000561630 PTPRFP10586 1907 aa28.67■■■□□ 2.18
CDR2-202ENST00000561630 ATAD5Q96QE3 1844 aa28.67■■■□□ 2.18
CDR2-202ENST00000561630 C19orf81C9J6K1 198 aa28.67■■■□□ 2.18
CDR2-202ENST00000561630 USP17L10C9JJH3 530 aa28.67■■■□□ 2.18
CDR2-202ENST00000561630 CYP2D6P10635 497 aa28.67■■■□□ 2.18
CDR2-202ENST00000561630 PABPC4Q13310 644 aaKnown RBP eCLIP28.67■■■□□ 2.18
CDR2-202ENST00000561630 ABCB5Q2M3G0 1257 aa28.67■■■□□ 2.18
CDR2-202ENST00000561630 SMCR8Q8TEV9 937 aaPredicted RBP28.67■■■□□ 2.18
CDR2-202ENST00000561630 APPBP2Q92624 585 aa28.67■■■□□ 2.18
CDR2-202ENST00000561630 PNMA3Q9UL41 463 aa28.67■■■□□ 2.18
CDR2-202ENST00000561630 LRRFIP1Q32MZ4 808 aaKnown RBP28.66■■■□□ 2.18
CDR2-202ENST00000561630 OSBP2Q969R2 916 aa28.66■■■□□ 2.18
CDR2-202ENST00000561630 DDRGK1Q96HY6 314 aa28.66■■■□□ 2.18
CDR2-202ENST00000561630 STRBPQ96SI9 672 aaKnown RBP28.66■■■□□ 2.18
CDR2-202ENST00000561630 TMOD4Q9NZQ9 345 aa28.66■■■□□ 2.18
CDR2-202ENST00000561630 CTGFP29279 349 aa28.65■■■□□ 2.18
CDR2-202ENST00000561630 PSMC4P43686 418 aa28.65■■■□□ 2.18
CDR2-202ENST00000561630 SMC5Q8IY18 1101 aa28.65■■■□□ 2.18
CDR2-202ENST00000561630 CABP5Q9NP86 173 aa28.65■■■□□ 2.18
CDR2-202ENST00000561630 STAP2Q9UGK3 403 aa28.65■■■□□ 2.18
CDR2-202ENST00000561630 NAV1Q8NEY1 1877 aa28.65■■■□□ 2.18
CDR2-202ENST00000561630 CENPFP49454 3210 aa28.65■■■□□ 2.18
CDR2-202ENST00000561630 SOX10P56693 466 aa28.64■■■□□ 2.18
CDR2-202ENST00000561630 C12orf60Q5U649 245 aa28.64■■■□□ 2.18
CDR2-202ENST00000561630 TRIM47Q96LD4 638 aa28.64■■■□□ 2.18
CDR2-202ENST00000561630 SWAP70Q9UH65 585 aa28.64■■■□□ 2.18
CDR2-202ENST00000561630 USP17L12C9JPN9 530 aa28.63■■■□□ 2.17
CDR2-202ENST00000561630 USP17L21D6R901 530 aa28.63■■■□□ 2.17
CDR2-202ENST00000561630 RAB3GAP1Q15042 981 aa28.63■■■□□ 2.17
CDR2-202ENST00000561630 AMOTL1Q8IY63 956 aa28.63■■■□□ 2.17
CDR2-202ENST00000561630 ASCC2Q9H1I8 757 aaPredicted RBP28.63■■■□□ 2.17
CDR2-202ENST00000561630 PTCH2Q9Y6C5 1203 aa28.63■■■□□ 2.17
CDR2-202ENST00000561630 LOC285556D6RIA3 1793 aa28.62■■■□□ 2.17
CDR2-202ENST00000561630 OSBPP22059 807 aa28.62■■■□□ 2.17
CDR2-202ENST00000561630 HOXA7P31268 230 aaPredicted RBP28.62■■■□□ 2.17
CDR2-202ENST00000561630 PRMT2P55345 433 aa28.62■■■□□ 2.17
CDR2-202ENST00000561630 SLC44A5Q8NCS7 719 aa28.62■■■□□ 2.17
CDR2-202ENST00000561630 DYNLL2Q96FJ2 89 aa28.62■■■□□ 2.17
CDR2-202ENST00000561630 CYP2D7A0A087X1C5 515 aa28.61■■■□□ 2.17
CDR2-202ENST00000561630 ECM2O94769 699 aaPredicted RBP28.61■■■□□ 2.17
CDR2-202ENST00000561630 FMNL1O95466 1100 aaPredicted RBP28.61■■■□□ 2.17
CDR2-202ENST00000561630 IGHDP01880 384 aa28.61■■■□□ 2.17
CDR2-202ENST00000561630 GUCY1A2P33402 732 aa28.61■■■□□ 2.17
CDR2-202ENST00000561630 PDE1AP54750 535 aa28.61■■■□□ 2.17
CDR2-202ENST00000561630 CTR9Q6PD62 1173 aa28.61■■■□□ 2.17
CDR2-202ENST00000561630 USP17L2Q6R6M4 530 aa28.61■■■□□ 2.17
CDR2-202ENST00000561630 ARMC5Q96C12 935 aa28.61■■■□□ 2.17
CDR2-202ENST00000561630 FSD1Q9BTV5 496 aa28.61■■■□□ 2.17
CDR2-202ENST00000561630 EMILIN3Q9NT22 766 aa28.61■■■□□ 2.17
CDR2-202ENST00000561630 MYH7P12883 1935 aa28.61■■■□□ 2.17
CDR2-202ENST00000561630 GCLCP48506 637 aaPredicted RBP28.6■■■□□ 2.17
CDR2-202ENST00000561630 GIMAP6Q6P9H5 292 aa28.6■■■□□ 2.17
CDR2-202ENST00000561630 SRRDQ9UH36 339 aa28.6■■■□□ 2.17
CDR2-202ENST00000561630 GSG1L2A8MUP6 293 aa28.59■■■□□ 2.17
CDR2-202ENST00000561630 SMIM22K7EJ46 135 aa28.59■■■□□ 2.17
CDR2-202ENST00000561630 GPAA1O43292 621 aa28.59■■■□□ 2.17
CDR2-202ENST00000561630 HOXD10P28358 340 aa28.59■■■□□ 2.17
CDR2-202ENST00000561630 FCGRTP55899 365 aa28.59■■■□□ 2.17
CDR2-202ENST00000561630 SEPT2Q15019 361 aa28.59■■■□□ 2.17
CDR2-202ENST00000561630 FAM110CQ1W6H9 321 aa28.59■■■□□ 2.17
CDR2-202ENST00000561630 ANKRD13CQ8N6S4 541 aa28.59■■■□□ 2.17
CDR2-202ENST00000561630 C12orf42Q96LP6 360 aa28.59■■■□□ 2.17
CDR2-202ENST00000561630 FEZ1Q99689 392 aa28.59■■■□□ 2.17
CDR2-202ENST00000561630 LNPKQ9C0E8 428 aa28.59■■■□□ 2.17
CDR2-202ENST00000561630 KIAA1683Q9H0B3 1180 aa28.59■■■□□ 2.17
CDR2-202ENST00000561630 ARPP21Q9UBL0 812 aaPredicted RBP28.59■■■□□ 2.17
CDR2-202ENST00000561630 M0R2C6 588 aa28.58■■■□□ 2.17
CDR2-202ENST00000561630 MPHOSPH10O00566 681 aaKnown RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms