RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 ELMO3Q96BJ8 720 aa6.04□□□□□ -1.44
LRRC28-222ENST00000561431 RHOVQ96L33 236 aa6.04□□□□□ -1.44
LRRC28-222ENST00000561431 RUSC1Q9BVN2 902 aa6.04□□□□□ -1.44
LRRC28-222ENST00000561431 TANGO6Q9C0B7 1094 aa6.04□□□□□ -1.44
LRRC28-222ENST00000561431 CCDC86Q9H6F5 360 aaKnown RBP6.04□□□□□ -1.44
LRRC28-222ENST00000561431 ATG3Q9NT62 314 aa6.04□□□□□ -1.44
LRRC28-222ENST00000561431 UBP1Q9NZI7 540 aa6.04□□□□□ -1.44
LRRC28-222ENST00000561431 LEMD3Q9Y2U8 911 aa6.04□□□□□ -1.44
LRRC28-222ENST00000561431 CEP170Q5SW79 1584 aa6.04□□□□□ -1.44
LRRC28-222ENST00000561431 F13A1P00488 732 aa6.03□□□□□ -1.44
LRRC28-222ENST00000561431 ZNF252P-AS1Q0IIN9 211 aa6.03□□□□□ -1.44
LRRC28-222ENST00000561431 SEZ6Q53EL9 994 aa6.03□□□□□ -1.44
LRRC28-222ENST00000561431 AKAP4Q5JQC9 854 aa6.03□□□□□ -1.44
LRRC28-222ENST00000561431 MPRIPQ6WCQ1 1025 aa6.03□□□□□ -1.44
LRRC28-222ENST00000561431 PDZD3Q86UT5 571 aa6.03□□□□□ -1.44
LRRC28-222ENST00000561431 CCDC84Q86UT8 332 aaPredicted RBP6.03□□□□□ -1.44
LRRC28-222ENST00000561431 TP53INP2Q8IXH6 220 aa6.03□□□□□ -1.44
LRRC28-222ENST00000561431 FBXL6Q8N531 539 aa6.03□□□□□ -1.44
LRRC28-222ENST00000561431 GATAD2BQ8WXI9 593 aa6.03□□□□□ -1.44
LRRC28-222ENST00000561431 SPATA32Q96LK8 384 aa6.03□□□□□ -1.44
LRRC28-222ENST00000561431 RNF208Q9H0X6 261 aa6.03□□□□□ -1.44
LRRC28-222ENST00000561431 KRT82Q9NSB4 513 aa6.03□□□□□ -1.44
LRRC28-222ENST00000561431 CDK11AQ9UQ88 783 aaPredicted RBP6.03□□□□□ -1.44
LRRC28-222ENST00000561431 ARAP1Q96P48 1450 aa6.02□□□□□ -1.44
LRRC28-222ENST00000561431 FHAD1B1AJZ9 1412 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 NUP160Q12769 1436 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 MAP4P27816 1152 aaKnown RBP6.02□□□□□ -1.45
LRRC28-222ENST00000561431 CPSF6Q16630 551 aaKnown RBP eCLIP6.02□□□□□ -1.45
LRRC28-222ENST00000561431 SGO2Q562F6 1265 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 EXOSC6Q5RKV6 272 aaKnown RBP6.02□□□□□ -1.45
LRRC28-222ENST00000561431 FBXW10Q5XX13 1052 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 SCARA3Q6AZY7 606 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 FDX2Q6P4F2 183 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 SPOCD1Q6ZMY3 1216 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 FAM196AQ6ZSG2 479 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 HDXQ7Z353 690 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 SHISA5Q8N114 240 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 C12orf50Q8NA57 414 aaPredicted RBP6.02□□□□□ -1.45
LRRC28-222ENST00000561431 GIMAP7Q8NHV1 300 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 SREK1Q8WXA9 508 aaKnown RBP6.02□□□□□ -1.45
LRRC28-222ENST00000561431 EAF1Q96JC9 268 aaPredicted RBP6.02□□□□□ -1.45
LRRC28-222ENST00000561431 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.02□□□□□ -1.45
LRRC28-222ENST00000561431 TINF2Q9BSI4 451 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 NT5C1AQ9BXI3 368 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 KRTAP4-5Q9BYR2 181 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 CYP4F12Q9HCS2 524 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 PRKAG2Q9UGJ0 569 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 EFR3BQ9Y2G0 817 aa6.02□□□□□ -1.45
LRRC28-222ENST00000561431 SHROOM2Q13796 1616 aa6.01□□□□□ -1.45
LRRC28-222ENST00000561431 SSBP05455 408 aaKnown RBP eCLIP6.01□□□□□ -1.45
LRRC28-222ENST00000561431 ATP2B1P20020 1258 aa6.01□□□□□ -1.45
LRRC28-222ENST00000561431 PTPN11Q06124 597 aaPredicted RBP6.01□□□□□ -1.45
LRRC28-222ENST00000561431 FBLN7Q53RD9 439 aa6.01□□□□□ -1.45
LRRC28-222ENST00000561431 WIPI1Q5MNZ9 446 aaPredicted RBP6.01□□□□□ -1.45
LRRC28-222ENST00000561431 ZNF648Q5T619 568 aaPredicted RBP6.01□□□□□ -1.45
LRRC28-222ENST00000561431 FBXO27Q8NI29 283 aa6.01□□□□□ -1.45
LRRC28-222ENST00000561431 DRC1Q96MC2 740 aa6.01□□□□□ -1.45
LRRC28-222ENST00000561431 FERD3LQ96RJ6 166 aa6.01□□□□□ -1.45
LRRC28-222ENST00000561431 OSBPL1AQ9BXW6 950 aa6.01□□□□□ -1.45
LRRC28-222ENST00000561431 AP4E1Q9UPM8 1137 aa6.01□□□□□ -1.45
LRRC28-222ENST00000561431 CSADQ9Y600 493 aa6.01□□□□□ -1.45
LRRC28-222ENST00000561431 ROBO2Q9HCK4 1378 aa6.01□□□□□ -1.45
LRRC28-222ENST00000561431 RUSC2Q8N2Y8 1516 aa6□□□□□ -1.45
LRRC28-222ENST00000561431 DCDC2CA8MYV0 355 aa6□□□□□ -1.45
LRRC28-222ENST00000561431 GAS2O43903 313 aaKnown RBP6□□□□□ -1.45
LRRC28-222ENST00000561431 GREM1O60565 184 aa6□□□□□ -1.45
LRRC28-222ENST00000561431 AOC2O75106 756 aa6□□□□□ -1.45
LRRC28-222ENST00000561431 CTSBP07858 339 aa6□□□□□ -1.45
LRRC28-222ENST00000561431 GJA8P48165 433 aa6□□□□□ -1.45
LRRC28-222ENST00000561431 NASPP49321 788 aaPredicted RBP6□□□□□ -1.45
LRRC28-222ENST00000561431 MPP2Q14168 576 aa6□□□□□ -1.45
LRRC28-222ENST00000561431 PDZRN4Q6ZMN7 1036 aaPredicted RBP6□□□□□ -1.45
LRRC28-222ENST00000561431 SLC43A3Q8NBI5 491 aa6□□□□□ -1.45
LRRC28-222ENST00000561431 WDR89Q96FK6 387 aaPredicted RBP6□□□□□ -1.45
LRRC28-222ENST00000561431 CRBNQ96SW2 442 aa6□□□□□ -1.45
LRRC28-222ENST00000561431 NRSN2Q9GZP1 204 aa6□□□□□ -1.45
LRRC28-222ENST00000561431 ERCC6L2Q5T890 1561 aa6□□□□□ -1.45
LRRC28-222ENST00000561431 CUL7Q14999 1698 aa6□□□□□ -1.45
LRRC28-222ENST00000561431 PRAMEF27A3QJZ7 478 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 ZNF862O60290 1169 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 CILPO75339 1184 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 DLGAP3O95886 979 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 HSP90B1P14625 803 aaKnown RBP5.99□□□□□ -1.45
LRRC28-222ENST00000561431 GARTP22102 1010 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 GTF2F1P35269 517 aaKnown RBP eCLIP5.99□□□□□ -1.45
LRRC28-222ENST00000561431 CRKP46108 304 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 ZNF165P49910 485 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 ETF1P62495 437 aaKnown RBP5.99□□□□□ -1.45
LRRC28-222ENST00000561431 ID3Q02535 119 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 RPL6Q02878 288 aaKnown RBP5.99□□□□□ -1.45
LRRC28-222ENST00000561431 GK5Q6ZS86 529 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 DYMQ7RTS9 669 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 C12orf40Q86WS4 652 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 GAL3ST3Q96A11 431 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 PLPPR2Q96GM1 343 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 PIDD1Q9HB75 910 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 SSU72Q9NP77 194 aaKnown RBP5.99□□□□□ -1.45
LRRC28-222ENST00000561431 PAK6Q9NQU5 681 aaPredicted RBP5.99□□□□□ -1.45
LRRC28-222ENST00000561431 GINM1Q9NU53 330 aa5.99□□□□□ -1.45
LRRC28-222ENST00000561431 KIF27Q86VH2 1401 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms