RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CFHR5Q9BXR6 569 aa23.89■■□□□ 1.41
TSPAN3-210ENST00000561277 GSG1L2A8MUP6 293 aa23.88■■□□□ 1.41
TSPAN3-210ENST00000561277 SMIM22K7EJ46 135 aa23.88■■□□□ 1.41
TSPAN3-210ENST00000561277 GH2P01242 217 aa23.88■■□□□ 1.41
TSPAN3-210ENST00000561277 APPP05067 770 aa23.88■■□□□ 1.41
TSPAN3-210ENST00000561277 GNAT2P19087 354 aa23.88■■□□□ 1.41
TSPAN3-210ENST00000561277 SHMT1P34896 483 aa23.88■■□□□ 1.41
TSPAN3-210ENST00000561277 GADL1Q6ZQY3 521 aa23.88■■□□□ 1.41
TSPAN3-210ENST00000561277 CCDC129Q6ZRS4 1044 aa23.88■■□□□ 1.41
TSPAN3-210ENST00000561277 SLC44A5Q8NCS7 719 aa23.88■■□□□ 1.41
TSPAN3-210ENST00000561277 DYNLL2Q96FJ2 89 aa23.88■■□□□ 1.41
TSPAN3-210ENST00000561277 A0A0G2JLL6 359 aaPredicted RBP23.87■■□□□ 1.41
TSPAN3-210ENST00000561277 GPR25O00155 361 aa23.87■■□□□ 1.41
TSPAN3-210ENST00000561277 SPP2Q13103 211 aa23.87■■□□□ 1.41
TSPAN3-210ENST00000561277 CERKLQ49MI3 558 aaPredicted RBP23.87■■□□□ 1.41
TSPAN3-210ENST00000561277 CTR9Q6PD62 1173 aa23.87■■□□□ 1.41
TSPAN3-210ENST00000561277 PRRT2Q7Z6L0 340 aaPredicted RBP23.87■■□□□ 1.41
TSPAN3-210ENST00000561277 ZNF280CQ8ND82 737 aa23.87■■□□□ 1.41
TSPAN3-210ENST00000561277 ZNF296Q8WUU4 475 aaPredicted RBP23.87■■□□□ 1.41
TSPAN3-210ENST00000561277 EPB41L4AQ9HCS5 686 aaPredicted RBP23.87■■□□□ 1.41
TSPAN3-210ENST00000561277 PTPRFP10586 1907 aa23.87■■□□□ 1.41
TSPAN3-210ENST00000561277 TDO2P48775 406 aa23.86■■□□□ 1.41
TSPAN3-210ENST00000561277 MOGSQ13724 837 aa23.86■■□□□ 1.41
TSPAN3-210ENST00000561277 C12orf60Q5U649 245 aa23.86■■□□□ 1.41
TSPAN3-210ENST00000561277 TNS4Q8IZW8 715 aa23.86■■□□□ 1.41
TSPAN3-210ENST00000561277 AS3MTQ9HBK9 375 aa23.86■■□□□ 1.41
TSPAN3-210ENST00000561277 ARPP21Q9UBL0 812 aaPredicted RBP23.86■■□□□ 1.41
TSPAN3-210ENST00000561277 ABCB5Q2M3G0 1257 aa23.86■■□□□ 1.41
TSPAN3-210ENST00000561277 FAM227BQ96M60 508 aa23.86■■□□□ 1.41
TSPAN3-210ENST00000561277 PDHXO00330 501 aa23.85■■□□□ 1.41
TSPAN3-210ENST00000561277 NEFLP07196 543 aa23.85■■□□□ 1.41
TSPAN3-210ENST00000561277 CENPBP07199 599 aaPredicted RBP23.85■■□□□ 1.41
TSPAN3-210ENST00000561277 FASTKD5Q7L8L6 764 aaKnown RBP23.85■■□□□ 1.41
TSPAN3-210ENST00000561277 ANKRD23Q86SG2 305 aa23.85■■□□□ 1.41
TSPAN3-210ENST00000561277 TBC1D2Q9BYX2 928 aa23.85■■□□□ 1.41
TSPAN3-210ENST00000561277 ZFYVE28Q9HCC9 887 aa23.85■■□□□ 1.41
TSPAN3-210ENST00000561277 GINM1Q9NU53 330 aa23.85■■□□□ 1.41
TSPAN3-210ENST00000561277 SWAP70Q9UH65 585 aa23.85■■□□□ 1.41
TSPAN3-210ENST00000561277 A0A0D9SFI3 127 aa23.84■■□□□ 1.41
TSPAN3-210ENST00000561277 PATL2C9JE40 543 aaKnown RBP23.84■■□□□ 1.41
TSPAN3-210ENST00000561277 MPHOSPH10O00566 681 aaKnown RBP23.84■■□□□ 1.41
TSPAN3-210ENST00000561277 RAB3GAP1Q15042 981 aa23.84■■□□□ 1.41
TSPAN3-210ENST00000561277 GIMAP6Q6P9H5 292 aa23.84■■□□□ 1.41
TSPAN3-210ENST00000561277 ZCCHC17Q9NP64 241 aaKnown RBP23.84■■□□□ 1.41
TSPAN3-210ENST00000561277 MINDY4BA8MYZ0 360 aa23.83■■□□□ 1.41
TSPAN3-210ENST00000561277 HMGCS2P54868 508 aa23.83■■□□□ 1.41
TSPAN3-210ENST00000561277 NMIQ13287 307 aaPredicted RBP23.83■■□□□ 1.41
TSPAN3-210ENST00000561277 DGKZQ13574 1117 aa23.83■■□□□ 1.41
TSPAN3-210ENST00000561277 MTMR2Q13614 643 aa23.83■■□□□ 1.41
TSPAN3-210ENST00000561277 GPAT2Q6NUI2 795 aa23.83■■□□□ 1.41
TSPAN3-210ENST00000561277 STK11IPQ8N1F8 1099 aa23.83■■□□□ 1.41
TSPAN3-210ENST00000561277 CABP5Q9NP86 173 aa23.83■■□□□ 1.41
TSPAN3-210ENST00000561277 HELLSQ9NRZ9 838 aa23.83■■□□□ 1.41
TSPAN3-210ENST00000561277 MYH8P13535 1937 aa23.83■■□□□ 1.4
TSPAN3-210ENST00000561277 IFNL3Q8IZI9 196 aa23.82■■□□□ 1.4
TSPAN3-210ENST00000561277 WDR18Q9BV38 432 aa23.82■■□□□ 1.4
TSPAN3-210ENST00000561277 NACAP1Q9BZK3 213 aa23.82■■□□□ 1.4
TSPAN3-210ENST00000561277 FKTNO75072 461 aa23.82■■□□□ 1.4
TSPAN3-210ENST00000561277 SDSP20132 328 aa23.82■■□□□ 1.4
TSPAN3-210ENST00000561277 SBK1Q52WX2 424 aa23.82■■□□□ 1.4
TSPAN3-210ENST00000561277 NOM1Q5C9Z4 860 aaKnown RBP23.82■■□□□ 1.4
TSPAN3-210ENST00000561277 TTC22Q5TAA0 569 aa23.82■■□□□ 1.4
TSPAN3-210ENST00000561277 C16orf86Q6ZW13 317 aa23.82■■□□□ 1.4
TSPAN3-210ENST00000561277 NAPBQ9H115 298 aa23.82■■□□□ 1.4
TSPAN3-210ENST00000561277 GSPT1P15170 499 aaKnown RBP23.81■■□□□ 1.4
TSPAN3-210ENST00000561277 CDK8P49336 464 aa23.81■■□□□ 1.4
TSPAN3-210ENST00000561277 MCMDC2Q4G0Z9 681 aa23.81■■□□□ 1.4
TSPAN3-210ENST00000561277 CENPQQ7L2Z9 268 aaPredicted RBP23.81■■□□□ 1.4
TSPAN3-210ENST00000561277 TICAM2Q86XR7 235 aa23.81■■□□□ 1.4
TSPAN3-210ENST00000561277 LOC285556D6RIA3 1793 aa23.8■■□□□ 1.4
TSPAN3-210ENST00000561277 BACE1P56817 501 aa23.8■■□□□ 1.4
TSPAN3-210ENST00000561277 TREML2Q5T2D2 321 aa23.8■■□□□ 1.4
TSPAN3-210ENST00000561277 VPS53Q5VIR6 699 aa23.8■■□□□ 1.4
TSPAN3-210ENST00000561277 DIAPH3Q9NSV4 1193 aa23.8■■□□□ 1.4
TSPAN3-210ENST00000561277 TAOK2Q9UL54 1235 aa23.8■■□□□ 1.4
TSPAN3-210ENST00000561277 AGTPBP1Q9UPW5 1226 aa23.8■■□□□ 1.4
TSPAN3-210ENST00000561277 USP17L10C9JJH3 530 aa23.79■■□□□ 1.4
TSPAN3-210ENST00000561277 TLR2O60603 784 aa23.79■■□□□ 1.4
TSPAN3-210ENST00000561277 CYP2C8P10632 490 aa23.79■■□□□ 1.4
TSPAN3-210ENST00000561277 SEPT2Q15019 361 aa23.79■■□□□ 1.4
TSPAN3-210ENST00000561277 ZNF589Q86UQ0 364 aaPredicted RBP23.79■■□□□ 1.4
TSPAN3-210ENST00000561277 PROCA1Q8NCQ7 364 aaPredicted RBP23.79■■□□□ 1.4
TSPAN3-210ENST00000561277 FEZ1Q99689 392 aa23.79■■□□□ 1.4
TSPAN3-210ENST00000561277 FOXP2O15409 715 aa23.78■■□□□ 1.4
TSPAN3-210ENST00000561277 AKR1B1P15121 316 aa23.78■■□□□ 1.4
TSPAN3-210ENST00000561277 GUCY1A2P33402 732 aa23.78■■□□□ 1.4
TSPAN3-210ENST00000561277 ZYXQ15942 572 aaKnown RBP23.78■■□□□ 1.4
TSPAN3-210ENST00000561277 PARK7Q99497 189 aaKnown RBP23.78■■□□□ 1.4
TSPAN3-210ENST00000561277 TMOD4Q9NZQ9 345 aa23.78■■□□□ 1.4
TSPAN3-210ENST00000561277 ROBO3Q96MS0 1386 aa23.78■■□□□ 1.4
TSPAN3-210ENST00000561277 SH3D19Q5HYK7 790 aa23.78■■□□□ 1.4
TSPAN3-210ENST00000561277 CWC27Q6UX04 472 aaKnown RBP23.78■■□□□ 1.4
TSPAN3-210ENST00000561277 CCDC136Q96JN2 1154 aa23.78■■□□□ 1.4
TSPAN3-210ENST00000561277 SP3Q02447 781 aa23.77■■□□□ 1.4
TSPAN3-210ENST00000561277 TMEM179Q6ZVK1 233 aa23.77■■□□□ 1.4
TSPAN3-210ENST00000561277 ACER1Q8TDN7 264 aa23.77■■□□□ 1.4
TSPAN3-210ENST00000561277 CPA4Q9UI42 421 aa23.77■■□□□ 1.4
TSPAN3-210ENST00000561277 CCDC171Q6TFL3 1326 aa23.77■■□□□ 1.4
TSPAN3-210ENST00000561277 C19orf81C9J6K1 198 aa23.76■■□□□ 1.39
TSPAN3-210ENST00000561277 CTU1Q7Z7A3 348 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms