RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 SPDYE2Q495Y8 402 aa26.2■■□□□ 1.78
SNX22-205ENST00000560945 FOXD4L5Q5VV16 416 aaPredicted RBP26.2■■□□□ 1.78
SNX22-205ENST00000560945 IQCA1Q86XH1 822 aa26.2■■□□□ 1.78
SNX22-205ENST00000560945 FOXD4L4Q8WXT5 416 aaPredicted RBP26.2■■□□□ 1.78
SNX22-205ENST00000560945 MTA3Q9BTC8 594 aa26.2■■□□□ 1.78
SNX22-205ENST00000560945 SIPA1L1O43166 1804 aa26.2■■□□□ 1.78
SNX22-205ENST00000560945 WNT10BO00744 389 aa26.19■■□□□ 1.78
SNX22-205ENST00000560945 ZNF444Q8N0Y2 327 aaPredicted RBP26.19■■□□□ 1.78
SNX22-205ENST00000560945 DNAJC18Q9H819 358 aa26.19■■□□□ 1.78
SNX22-205ENST00000560945 SCAF8Q9UPN6 1271 aaKnown RBP26.19■■□□□ 1.78
SNX22-205ENST00000560945 CDC27P30260 824 aa26.18■■□□□ 1.78
SNX22-205ENST00000560945 SAMD7Q7Z3H4 446 aa26.18■■□□□ 1.78
SNX22-205ENST00000560945 ZSCAN29Q8IWY8 852 aaPredicted RBP26.18■■□□□ 1.78
SNX22-205ENST00000560945 DDX11Q96FC9 970 aa26.18■■□□□ 1.78
SNX22-205ENST00000560945 VEZTQ9HBM0 779 aa26.18■■□□□ 1.78
SNX22-205ENST00000560945 CNOT7Q9UIV1 285 aaKnown RBP26.18■■□□□ 1.78
SNX22-205ENST00000560945 SLC12A7Q9Y666 1083 aa26.18■■□□□ 1.78
SNX22-205ENST00000560945 CNTNAP1P78357 1384 aa26.18■■□□□ 1.78
SNX22-205ENST00000560945 ZBTB43O43298 467 aa26.18■■□□□ 1.78
SNX22-205ENST00000560945 RCSD1Q6JBY9 416 aa26.18■■□□□ 1.78
SNX22-205ENST00000560945 RNF181Q9P0P0 153 aa26.18■■□□□ 1.78
SNX22-205ENST00000560945 SERPINB13Q9UIV8 391 aa26.18■■□□□ 1.78
SNX22-205ENST00000560945 ENTPD3O75355 529 aa26.17■■□□□ 1.78
SNX22-205ENST00000560945 NPM3O75607 178 aaKnown RBP26.17■■□□□ 1.78
SNX22-205ENST00000560945 HLA-DOAP06340 250 aa26.17■■□□□ 1.78
SNX22-205ENST00000560945 TSPY3P0CV98 308 aa26.17■■□□□ 1.78
SNX22-205ENST00000560945 TSPY8P0CW00 308 aa26.17■■□□□ 1.78
SNX22-205ENST00000560945 SHMT1P34896 483 aa26.17■■□□□ 1.78
SNX22-205ENST00000560945 ADD1P35611 737 aaKnown RBP26.17■■□□□ 1.78
SNX22-205ENST00000560945 METAP2P50579 478 aaKnown RBP eCLIP26.17■■□□□ 1.78
SNX22-205ENST00000560945 IFIT1BQ5T764 474 aaKnown RBP26.17■■□□□ 1.78
SNX22-205ENST00000560945 SMARCC2Q8TAQ2 1214 aa26.17■■□□□ 1.78
SNX22-205ENST00000560945 TNPO1Q92973 898 aaKnown RBP26.17■■□□□ 1.78
SNX22-205ENST00000560945 FAM217BQ9NTX9 383 aaPredicted RBP26.17■■□□□ 1.78
SNX22-205ENST00000560945 ASTN2O75129 1339 aaPredicted RBP26.16■■□□□ 1.78
SNX22-205ENST00000560945 PTPDC1A2A3K4 754 aa26.16■■□□□ 1.78
SNX22-205ENST00000560945 TBC1D10BQ4KMP7 808 aaPredicted RBP26.16■■□□□ 1.78
SNX22-205ENST00000560945 ZNF654Q8IZM8 581 aa26.16■■□□□ 1.78
SNX22-205ENST00000560945 DPF2Q92785 391 aa26.16■■□□□ 1.78
SNX22-205ENST00000560945 TMOD2Q9NZR1 351 aa26.16■■□□□ 1.78
SNX22-205ENST00000560945 GOLGA8AA7E2F4 631 aa26.16■■□□□ 1.78
SNX22-205ENST00000560945 CDAN1Q8IWY9 1227 aa26.16■■□□□ 1.78
SNX22-205ENST00000560945 AKR1B1P15121 316 aa26.15■■□□□ 1.78
SNX22-205ENST00000560945 SYT1P21579 422 aa26.15■■□□□ 1.78
SNX22-205ENST00000560945 DHX36Q9H2U1 1008 aaKnown RBP26.15■■□□□ 1.78
SNX22-205ENST00000560945 NUCB2P80303 420 aa26.14■■□□□ 1.78
SNX22-205ENST00000560945 NUP133Q8WUM0 1156 aa26.14■■□□□ 1.78
SNX22-205ENST00000560945 LLPHQ9BRT6 129 aaKnown RBP26.14■■□□□ 1.78
SNX22-205ENST00000560945 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.14■■□□□ 1.78
SNX22-205ENST00000560945 EHD4Q9H223 541 aa26.14■■□□□ 1.78
SNX22-205ENST00000560945 ZNF287Q9HBT7 754 aa26.14■■□□□ 1.78
SNX22-205ENST00000560945 ATRNL1Q5VV63 1379 aa26.14■■□□□ 1.78
SNX22-205ENST00000560945 SHROOM1Q2M3G4 852 aaPredicted RBP26.14■■□□□ 1.77
SNX22-205ENST00000560945 C9orf131Q5VYM1 1079 aa26.14■■□□□ 1.77
SNX22-205ENST00000560945 TMTC2Q8N394 836 aa26.14■■□□□ 1.77
SNX22-205ENST00000560945 GRIN3BO60391 1043 aa26.13■■□□□ 1.77
SNX22-205ENST00000560945 BRD1O95696 1058 aa26.13■■□□□ 1.77
SNX22-205ENST00000560945 NEDD1Q8NHV4 660 aa26.13■■□□□ 1.77
SNX22-205ENST00000560945 PI4KBQ9UBF8 816 aa26.13■■□□□ 1.77
SNX22-205ENST00000560945 FDPSP14324 419 aaKnown RBP26.12■■□□□ 1.77
SNX22-205ENST00000560945 SYNE3Q6ZMZ3 975 aa26.12■■□□□ 1.77
SNX22-205ENST00000560945 CLEC10AQ8IUN9 316 aa26.12■■□□□ 1.77
SNX22-205ENST00000560945 CRACR2BQ8N4Y2 399 aaPredicted RBP26.12■■□□□ 1.77
SNX22-205ENST00000560945 CHAMP1Q96JM3 812 aa26.12■■□□□ 1.77
SNX22-205ENST00000560945 TMEM39BQ9GZU3 492 aa26.12■■□□□ 1.77
SNX22-205ENST00000560945 TCP11L1Q9NUJ3 509 aa26.12■■□□□ 1.77
SNX22-205ENST00000560945 SWAP70Q9UH65 585 aa26.12■■□□□ 1.77
SNX22-205ENST00000560945 DDNO94850 711 aaPredicted RBP26.11■■□□□ 1.77
SNX22-205ENST00000560945 FOSBP53539 338 aa26.11■■□□□ 1.77
SNX22-205ENST00000560945 GPC2Q8N158 579 aa26.11■■□□□ 1.77
SNX22-205ENST00000560945 FAM151AQ8WW52 585 aa26.11■■□□□ 1.77
SNX22-205ENST00000560945 MYO1BO43795 1136 aa26.11■■□□□ 1.77
SNX22-205ENST00000560945 KIF4BQ2VIQ3 1234 aa26.11■■□□□ 1.77
SNX22-205ENST00000560945 CMTR1Q8N1G2 835 aaKnown RBP26.11■■□□□ 1.77
SNX22-205ENST00000560945 CSRNP1Q96S65 589 aa26.11■■□□□ 1.77
SNX22-205ENST00000560945 NID2Q14112 1375 aa26.11■■□□□ 1.77
SNX22-205ENST00000560945 STX6O43752 255 aa26.1■■□□□ 1.77
SNX22-205ENST00000560945 NFKBIBQ15653 356 aa26.1■■□□□ 1.77
SNX22-205ENST00000560945 NTRK3Q16288 839 aa26.1■■□□□ 1.77
SNX22-205ENST00000560945 TRPM4Q8TD43 1214 aa26.1■■□□□ 1.77
SNX22-205ENST00000560945 CHMP4CQ96CF2 233 aa26.1■■□□□ 1.77
SNX22-205ENST00000560945 CEP95Q96GE4 821 aa26.1■■□□□ 1.77
SNX22-205ENST00000560945 GPRC5DQ9NZD1 345 aa26.1■■□□□ 1.77
SNX22-205ENST00000560945 COL2A1P02458 1487 aaPredicted RBP26.1■■□□□ 1.77
SNX22-205ENST00000560945 CPLX1O14810 134 aa26.09■■□□□ 1.77
SNX22-205ENST00000560945 EPS15P42566 896 aa26.09■■□□□ 1.77
SNX22-205ENST00000560945 TROAPQ12815 778 aa26.09■■□□□ 1.77
SNX22-205ENST00000560945 RTN1Q16799 776 aa26.09■■□□□ 1.77
SNX22-205ENST00000560945 LARP1BQ659C4 914 aaKnown RBP26.09■■□□□ 1.77
SNX22-205ENST00000560945 PHKBQ93100 1093 aa26.09■■□□□ 1.77
SNX22-205ENST00000560945 MTMR6Q9Y217 621 aa26.09■■□□□ 1.77
SNX22-205ENST00000560945 NT5C2P49902 561 aa26.09■■□□□ 1.77
SNX22-205ENST00000560945 CATIPQ7Z7H3 387 aa26.09■■□□□ 1.77
SNX22-205ENST00000560945 DGKHQ86XP1 1220 aa26.09■■□□□ 1.77
SNX22-205ENST00000560945 FANCBQ8NB91 859 aa26.09■■□□□ 1.77
SNX22-205ENST00000560945 ANKS1AQ92625 1134 aa26.09■■□□□ 1.77
SNX22-205ENST00000560945 STX8Q9UNK0 236 aa26.09■■□□□ 1.77
SNX22-205ENST00000560945 UBE2Q2LH0YL09 131 aa26.08■■□□□ 1.77
SNX22-205ENST00000560945 RRP1BQ14684 758 aaKnown RBP26.08■■□□□ 1.77
SNX22-205ENST00000560945 FKBP1CQ5VVH2 108 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms