RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 FPGSQ05932 587 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 MAP2K5Q13163 448 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 MORN1Q5T089 497 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 WDR78Q5VTH9 848 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 USP6NLQ92738 828 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 EDC3Q96F86 508 aaKnown RBP11.97□□□□□ -0.49
HERC1-210ENST00000560897 PAGR1Q9BTK6 254 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 TACC3Q9Y6A5 838 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 U3KPZ7 1027 aaPredicted RBP11.97□□□□□ -0.49
HERC1-210ENST00000560897 MYH2Q9UKX2 1941 aa11.96□□□□□ -0.49
HERC1-210ENST00000560897 TRIM43BA6NCK2 446 aa11.96□□□□□ -0.49
HERC1-210ENST00000560897 DDTLA6NHG4 134 aaPredicted RBP11.96□□□□□ -0.49
HERC1-210ENST00000560897 CLTBP09497 229 aa11.96□□□□□ -0.49
HERC1-210ENST00000560897 CCNA1P78396 465 aa11.96□□□□□ -0.49
HERC1-210ENST00000560897 PUM3Q15397 648 aaKnown RBP11.96□□□□□ -0.49
HERC1-210ENST00000560897 SH3D19Q5HYK7 790 aa11.96□□□□□ -0.49
HERC1-210ENST00000560897 SH3RF1Q7Z6J0 888 aa11.96□□□□□ -0.49
HERC1-210ENST00000560897 SLF2Q8IX21 1173 aa11.96□□□□□ -0.49
HERC1-210ENST00000560897 TRIM43Q96BQ3 446 aaPredicted RBP11.96□□□□□ -0.49
HERC1-210ENST00000560897 P2RX7Q99572 595 aaKnown RBP11.96□□□□□ -0.49
HERC1-210ENST00000560897 TXNRD2Q9NNW7 524 aa11.96□□□□□ -0.49
HERC1-210ENST00000560897 GNL3LQ9NVN8 582 aaKnown RBP11.96□□□□□ -0.49
HERC1-210ENST00000560897 CXXC1Q9P0U4 656 aaPredicted RBP11.96□□□□□ -0.49
HERC1-210ENST00000560897 IVNS1ABPQ9Y6Y0 642 aa11.96□□□□□ -0.49
HERC1-210ENST00000560897 TBC1D12O60347 775 aa11.95□□□□□ -0.5
HERC1-210ENST00000560897 SLC5A1P13866 664 aa11.95□□□□□ -0.5
HERC1-210ENST00000560897 HOXA7P31268 230 aaPredicted RBP11.95□□□□□ -0.5
HERC1-210ENST00000560897 MTMR2Q13614 643 aa11.95□□□□□ -0.5
HERC1-210ENST00000560897 SNX17Q15036 470 aa11.95□□□□□ -0.5
HERC1-210ENST00000560897 CCDC174Q6PII3 467 aa11.95□□□□□ -0.5
HERC1-210ENST00000560897 SH3BP5LQ7L8J4 393 aa11.95□□□□□ -0.5
HERC1-210ENST00000560897 PORCNQ9H237 461 aa11.95□□□□□ -0.5
HERC1-210ENST00000560897 EPHX3Q9H6B9 360 aa11.95□□□□□ -0.5
HERC1-210ENST00000560897 ADAMTS8Q9UP79 889 aa11.95□□□□□ -0.5
HERC1-210ENST00000560897 PLXNA1Q9UIW2 1896 aa11.94□□□□□ -0.5
HERC1-210ENST00000560897 APAF1O14727 1248 aa11.94□□□□□ -0.5
HERC1-210ENST00000560897 PEX10O60683 326 aa11.94□□□□□ -0.5
HERC1-210ENST00000560897 SLURP2P0DP57 97 aa11.94□□□□□ -0.5
HERC1-210ENST00000560897 TLE2Q04725 743 aa11.94□□□□□ -0.5
HERC1-210ENST00000560897 SKIV2LQ15477 1246 aaKnown RBP11.94□□□□□ -0.5
HERC1-210ENST00000560897 LRRC24Q50LG9 513 aa11.94□□□□□ -0.5
HERC1-210ENST00000560897 BEND3Q5T5X7 828 aa11.94□□□□□ -0.5
HERC1-210ENST00000560897 DZIP1Q86YF9 867 aaKnown RBP11.94□□□□□ -0.5
HERC1-210ENST00000560897 MICALL1Q8N3F8 863 aa11.94□□□□□ -0.5
HERC1-210ENST00000560897 ZGPATQ8N5A5 531 aaKnown RBP11.94□□□□□ -0.5
HERC1-210ENST00000560897 TSR2Q969E8 191 aaKnown RBP11.94□□□□□ -0.5
HERC1-210ENST00000560897 SLC15A5A6NIM6 579 aa11.93□□□□□ -0.5
HERC1-210ENST00000560897 FAM196BA6NMK8 535 aa11.93□□□□□ -0.5
HERC1-210ENST00000560897 F6X3S4 739 aa11.93□□□□□ -0.5
HERC1-210ENST00000560897 ADCYAP1R1P41586 468 aa11.93□□□□□ -0.5
HERC1-210ENST00000560897 EPHB4P54760 987 aa11.93□□□□□ -0.5
HERC1-210ENST00000560897 BACE1P56817 501 aa11.93□□□□□ -0.5
HERC1-210ENST00000560897 Q3C1V9 767 aa11.93□□□□□ -0.5
HERC1-210ENST00000560897 C1orf53Q5VUE5 145 aa11.93□□□□□ -0.5
HERC1-210ENST00000560897 FERMT2Q96AC1 680 aa11.93□□□□□ -0.5
HERC1-210ENST00000560897 PBX4Q9BYU1 374 aa11.93□□□□□ -0.5
HERC1-210ENST00000560897 RBPJLQ9UBG7 517 aa11.93□□□□□ -0.5
HERC1-210ENST00000560897 MSRAQ9UJ68 235 aa11.93□□□□□ -0.5
HERC1-210ENST00000560897 RFX7Q2KHR2 1363 aa11.92□□□□□ -0.5
HERC1-210ENST00000560897 C19orf81C9J6K1 198 aa11.92□□□□□ -0.5
HERC1-210ENST00000560897 PQBP1O60828 265 aaKnown RBP11.92□□□□□ -0.5
HERC1-210ENST00000560897 BMP1P13497 986 aa11.92□□□□□ -0.5
HERC1-210ENST00000560897 CYP2C19P33261 490 aa11.92□□□□□ -0.5
HERC1-210ENST00000560897 CAP2P40123 477 aa11.92□□□□□ -0.5
HERC1-210ENST00000560897 MRE11P49959 708 aa11.92□□□□□ -0.5
HERC1-210ENST00000560897 RAB30Q15771 203 aa11.92□□□□□ -0.5
HERC1-210ENST00000560897 ANO1Q5XXA6 986 aa11.92□□□□□ -0.5
HERC1-210ENST00000560897 VGLL2Q8N8G2 317 aa11.92□□□□□ -0.5
HERC1-210ENST00000560897 LPIN2Q92539 896 aa11.92□□□□□ -0.5
HERC1-210ENST00000560897 DDX4Q9NQI0 724 aaKnown RBP11.92□□□□□ -0.5
HERC1-210ENST00000560897 TMEM39AQ9NV64 488 aa11.92□□□□□ -0.5
HERC1-210ENST00000560897 FLRT1Q9NZU1 646 aa11.92□□□□□ -0.5
HERC1-210ENST00000560897 NDUFB9Q9Y6M9 179 aa11.92□□□□□ -0.5
HERC1-210ENST00000560897 GAKO14976 1311 aa11.91□□□□□ -0.5
HERC1-210ENST00000560897 SALL1Q9NSC2 1324 aa11.91□□□□□ -0.5
HERC1-210ENST00000560897 KIAA0355O15063 1070 aa11.91□□□□□ -0.5
HERC1-210ENST00000560897 GPR37L1O60883 481 aa11.91□□□□□ -0.5
HERC1-210ENST00000560897 CYBAP13498 195 aa11.91□□□□□ -0.5
HERC1-210ENST00000560897 ITGB8P26012 769 aa11.91□□□□□ -0.5
HERC1-210ENST00000560897 PBX2P40425 430 aa11.91□□□□□ -0.5
HERC1-210ENST00000560897 BTDP43251 543 aa11.91□□□□□ -0.5
HERC1-210ENST00000560897 ADGRE1Q14246 886 aa11.91□□□□□ -0.5
HERC1-210ENST00000560897 SUCLG2Q96I99 432 aa11.91□□□□□ -0.5
HERC1-210ENST00000560897 WDR18Q9BV38 432 aa11.91□□□□□ -0.5
HERC1-210ENST00000560897 DENND2AQ9ULE3 1009 aa11.91□□□□□ -0.5
HERC1-210ENST00000560897 FAM86C2PA6NEL3 165 aa11.9□□□□□ -0.5
HERC1-210ENST00000560897 USP17L10C9JJH3 530 aa11.9□□□□□ -0.5
HERC1-210ENST00000560897 SEPT4O43236 478 aa11.9□□□□□ -0.5
HERC1-210ENST00000560897 ALDH1L1O75891 902 aa11.9□□□□□ -0.5
HERC1-210ENST00000560897 ASNSP08243 561 aa11.9□□□□□ -0.5
HERC1-210ENST00000560897 PTPREP23469 700 aa11.9□□□□□ -0.5
HERC1-210ENST00000560897 KCNQ1P51787 676 aa11.9□□□□□ -0.5
HERC1-210ENST00000560897 TFF2Q03403 129 aa11.9□□□□□ -0.5
HERC1-210ENST00000560897 PPIGQ13427 754 aaKnown RBP eCLIP11.9□□□□□ -0.5
HERC1-210ENST00000560897 DPP9Q86TI2 863 aa11.9□□□□□ -0.5
HERC1-210ENST00000560897 TRIM34Q9BYJ4 488 aa11.9□□□□□ -0.5
HERC1-210ENST00000560897 SRCIN1Q9C0H9 1055 aa11.9□□□□□ -0.5
HERC1-210ENST00000560897 SLC28A3Q9HAS3 691 aa11.9□□□□□ -0.5
HERC1-210ENST00000560897 RABGAP1Q9Y3P9 1069 aa11.9□□□□□ -0.5
HERC1-210ENST00000560897 APBB1O00213 710 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms