RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 AOC3Q16853 763 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 L1TD1Q5T7N2 865 aaKnown RBP15.01□□□□□ -0.01
SNX1-211ENST00000560829 RCSD1Q6JBY9 416 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 APOBEC3HQ6NTF7 200 aaKnown RBP15.01□□□□□ -0.01
SNX1-211ENST00000560829 USP17L1Q7RTZ2 530 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 BRAPQ7Z569 592 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 NUP133Q8WUM0 1156 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 SPATA32Q96LK8 384 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 ZDHHC15Q96MV8 337 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 MKNK2Q9HBH9 465 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 KCNQ5Q9NR82 932 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 RBM27Q9P2N5 1060 aaKnown RBP15.01□□□□□ -0.01
SNX1-211ENST00000560829 SAP30BPQ9UHR5 308 aaKnown RBP15.01□□□□□ -0.01
SNX1-211ENST00000560829 NAV1Q8NEY1 1877 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 WDHD1O75717 1129 aaPredicted RBP15.01□□□□□ -0.01
SNX1-211ENST00000560829 DPEP1P16444 411 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 RASA1P20936 1047 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 KIF23Q02241 960 aaPredicted RBP15.01□□□□□ -0.01
SNX1-211ENST00000560829 OTUD7BQ6GQQ9 843 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 TRIM22Q8IYM9 498 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 ZNF396Q96N95 335 aaPredicted RBP15.01□□□□□ -0.01
SNX1-211ENST00000560829 SLC26A6Q9BXS9 759 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 RNF26Q9BY78 433 aaPredicted RBP15.01□□□□□ -0.01
SNX1-211ENST00000560829 TFIP11Q9UBB9 837 aaKnown RBP15.01□□□□□ -0.01
SNX1-211ENST00000560829 DEXIO95424 95 aa15□□□□□ -0.01
SNX1-211ENST00000560829 CRKP46108 304 aa15□□□□□ -0.01
SNX1-211ENST00000560829 TGFB2P61812 414 aa15□□□□□ -0.01
SNX1-211ENST00000560829 FUT2Q10981 343 aa15□□□□□ -0.01
SNX1-211ENST00000560829 KRT40Q6A162 431 aa15□□□□□ -0.01
SNX1-211ENST00000560829 KLHL34Q8N239 644 aa15□□□□□ -0.01
SNX1-211ENST00000560829 AIFM3Q96NN9 605 aa15□□□□□ -0.01
SNX1-211ENST00000560829 MAP3K14Q99558 947 aa15□□□□□ -0.01
SNX1-211ENST00000560829 VPS33BQ9H267 617 aa15□□□□□ -0.01
SNX1-211ENST00000560829 IL17RBQ9NRM6 502 aa15□□□□□ -0.01
SNX1-211ENST00000560829 RCOR1Q9UKL0 485 aa15□□□□□ -0.01
SNX1-211ENST00000560829 NMT2O60551 498 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 CDK8P49336 464 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 SCNN1DP51172 638 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 SLC4A8Q2Y0W8 1093 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 GAS2L3Q86XJ1 694 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 ZNF444Q8N0Y2 327 aaPredicted RBP14.99□□□□□ -0.01
SNX1-211ENST00000560829 MTFR1LQ9H019 292 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 USP40Q9NVE5 1235 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 KIF13BQ9NQT8 1826 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 PPIP5K2O43314 1243 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 GABPAQ06546 454 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 SOGA3Q5TF21 947 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 CDC42EP5Q6NZY7 148 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 SLC44A5Q8NCS7 719 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 GJB4Q9NTQ9 266 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 SERPINA10Q9UK55 444 aa14.99□□□□□ -0.01
SNX1-211ENST00000560829 TSPY3P0CV98 308 aa14.98□□□□□ -0.01
SNX1-211ENST00000560829 TSPY8P0CW00 308 aa14.98□□□□□ -0.01
SNX1-211ENST00000560829 NOVP48745 357 aa14.98□□□□□ -0.01
SNX1-211ENST00000560829 MRE11P49959 708 aa14.98□□□□□ -0.01
SNX1-211ENST00000560829 TRIM29Q14134 588 aa14.98□□□□□ -0.01
SNX1-211ENST00000560829 TMTC3Q6ZXV5 915 aa14.98□□□□□ -0.01
SNX1-211ENST00000560829 NEDD1Q8NHV4 660 aa14.98□□□□□ -0.01
SNX1-211ENST00000560829 USP28Q96RU2 1077 aa14.98□□□□□ -0.01
SNX1-211ENST00000560829 DDX4Q9NQI0 724 aaKnown RBP14.98□□□□□ -0.01
SNX1-211ENST00000560829 ZNF646O15015 1829 aaPredicted RBP14.97□□□□□ -0.01
SNX1-211ENST00000560829 YDJCA8MPS7 323 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 KIF28PB7ZC32 967 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 PRPF3O43395 683 aaKnown RBP14.97□□□□□ -0.01
SNX1-211ENST00000560829 NPM3O75607 178 aaKnown RBP14.97□□□□□ -0.01
SNX1-211ENST00000560829 U2AF2P26368 475 aaKnown RBP eCLIP14.97□□□□□ -0.014e-14■■■■□ 21.1
SNX1-211ENST00000560829 CCDC183Q5T5S1 534 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 MYSM1Q5VVJ2 828 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 KIAA0825Q8IV33 1275 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 CTCFLQ8NI51 663 aaPredicted RBP14.97□□□□□ -0.01
SNX1-211ENST00000560829 OSBPL5Q9H0X9 879 aaPredicted RBP14.97□□□□□ -0.01
SNX1-211ENST00000560829 KAT14Q9H8E8 782 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 RTEL1Q9NZ71 1219 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 MYO3BQ8WXR4 1341 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 PLIN4Q96Q06 1357 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 ZBTB7AO95365 584 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 POLD1P28340 1107 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 GUCY1A2P33402 732 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 PGBD1Q96JS3 809 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 IDI2Q9BXS1 227 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 POLR3EQ9NVU0 708 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 TAOK2Q9UL54 1235 aa14.97□□□□□ -0.01
SNX1-211ENST00000560829 UBE2Q2LH0YL09 131 aa14.96□□□□□ -0.01
SNX1-211ENST00000560829 PLEKHA8P1O95397 391 aa14.96□□□□□ -0.01
SNX1-211ENST00000560829 PICALMQ13492 652 aa14.96□□□□□ -0.01
SNX1-211ENST00000560829 LRSAM1Q6UWE0 723 aa14.96□□□□□ -0.01
SNX1-211ENST00000560829 CMTR1Q8N1G2 835 aaKnown RBP14.96□□□□□ -0.01
SNX1-211ENST00000560829 PNMA1Q8ND90 353 aa14.96□□□□□ -0.01
SNX1-211ENST00000560829 PIM2Q9P1W9 311 aa14.96□□□□□ -0.01
SNX1-211ENST00000560829 SWAP70Q9UH65 585 aa14.96□□□□□ -0.01
SNX1-211ENST00000560829 FOCADQ5VW36 1801 aa14.96□□□□□ -0.01
SNX1-211ENST00000560829 CDK5RAP2Q96SN8 1893 aa14.96□□□□□ -0.01
SNX1-211ENST00000560829 LETM1O95202 739 aaPredicted RBP14.95□□□□□ -0.02
SNX1-211ENST00000560829 YEATS4O95619 227 aa14.95□□□□□ -0.02
SNX1-211ENST00000560829 MMP1P03956 469 aa14.95□□□□□ -0.02
SNX1-211ENST00000560829 KIF5BP33176 963 aa14.95□□□□□ -0.02
SNX1-211ENST00000560829 NASPP49321 788 aaPredicted RBP14.95□□□□□ -0.02
SNX1-211ENST00000560829 EHD4Q9H223 541 aa14.95□□□□□ -0.02
SNX1-211ENST00000560829 GRPEL1Q9HAV7 217 aa14.95□□□□□ -0.02
SNX1-211ENST00000560829 SCN9AQ15858 1988 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms