RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 APBA2Q99767 749 aa12.31□□□□□ -0.44
TPM1-225ENST00000560679 WDR18Q9BV38 432 aa12.31□□□□□ -0.44
TPM1-225ENST00000560679 DNAJC18Q9H819 358 aa12.31□□□□□ -0.44
TPM1-225ENST00000560679 MRS2Q9HD23 443 aa12.31□□□□□ -0.44
TPM1-225ENST00000560679 MAPK4P31152 587 aa12.3□□□□□ -0.44
TPM1-225ENST00000560679 RGS2P41220 211 aa12.3□□□□□ -0.44
TPM1-225ENST00000560679 PI16Q6UXB8 463 aa12.3□□□□□ -0.44
TPM1-225ENST00000560679 NSUN4Q96CB9 384 aaKnown RBP12.3□□□□□ -0.44
TPM1-225ENST00000560679 AS3MTQ9HBK9 375 aa12.3□□□□□ -0.44
TPM1-225ENST00000560679 FLRT1Q9NZU1 646 aa12.3□□□□□ -0.44
TPM1-225ENST00000560679 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.3□□□□□ -0.44
TPM1-225ENST00000560679 ATN1P54259 1190 aaPredicted RBP12.29□□□□□ -0.44
TPM1-225ENST00000560679 TIMM10P62072 90 aa12.29□□□□□ -0.44
TPM1-225ENST00000560679 PDE3AQ14432 1141 aa12.29□□□□□ -0.44
TPM1-225ENST00000560679 C9orf50Q5SZB4 431 aa12.29□□□□□ -0.44
TPM1-225ENST00000560679 SPTY2D1Q68D10 685 aaPredicted RBP12.29□□□□□ -0.44
TPM1-225ENST00000560679 SENP6Q9GZR1 1112 aaPredicted RBP12.29□□□□□ -0.44
TPM1-225ENST00000560679 TTYH1Q9H313 450 aaPredicted RBP12.29□□□□□ -0.44
TPM1-225ENST00000560679 HERC5Q9UII4 1024 aaKnown RBP12.29□□□□□ -0.44
TPM1-225ENST00000560679 CNMDO75829 334 aa12.28□□□□□ -0.44
TPM1-225ENST00000560679 RTP1P59025 263 aa12.28□□□□□ -0.44
TPM1-225ENST00000560679 ERICH6Q7L0X2 663 aa12.28□□□□□ -0.44
TPM1-225ENST00000560679 PLEKHH3Q7Z736 793 aa12.28□□□□□ -0.44
TPM1-225ENST00000560679 SH3RF3Q8TEJ3 882 aaPredicted RBP12.28□□□□□ -0.44
TPM1-225ENST00000560679 MYLIPQ8WY64 445 aa12.28□□□□□ -0.44
TPM1-225ENST00000560679 XAGE2Q96GT9 111 aa12.28□□□□□ -0.44
TPM1-225ENST00000560679 LBHD1Q9BQE6 289 aaPredicted RBP12.28□□□□□ -0.44
TPM1-225ENST00000560679 PAGR1Q9BTK6 254 aa12.28□□□□□ -0.44
TPM1-225ENST00000560679 SEMA6BQ9H3T3 888 aa12.28□□□□□ -0.44
TPM1-225ENST00000560679 COPRSQ9NQ92 184 aa12.28□□□□□ -0.44
TPM1-225ENST00000560679 TMOD4Q9NZQ9 345 aa12.28□□□□□ -0.44
TPM1-225ENST00000560679 HMG20BQ9P0W2 317 aa12.28□□□□□ -0.44
TPM1-225ENST00000560679 A0A1B0GUL7 405 aa12.27□□□□□ -0.45
TPM1-225ENST00000560679 GDF11O95390 407 aa12.27□□□□□ -0.45
TPM1-225ENST00000560679 MAP4K4O95819 1239 aaPredicted RBP12.27□□□□□ -0.45
TPM1-225ENST00000560679 UBTFL1P0CB47 393 aaPredicted RBP12.27□□□□□ -0.45
TPM1-225ENST00000560679 MAP2K5Q13163 448 aa12.27□□□□□ -0.45
TPM1-225ENST00000560679 SHHQ15465 462 aa12.27□□□□□ -0.45
TPM1-225ENST00000560679 TBC1D9Q6ZT07 1266 aa12.27□□□□□ -0.45
TPM1-225ENST00000560679 METTL16Q86W50 562 aaKnown RBP12.27□□□□□ -0.45
TPM1-225ENST00000560679 TEX11Q8IYF3 940 aa12.27□□□□□ -0.45
TPM1-225ENST00000560679 TRPV1Q8NER1 839 aa12.27□□□□□ -0.45
TPM1-225ENST00000560679 EMILIN3Q9NT22 766 aa12.27□□□□□ -0.45
TPM1-225ENST00000560679 DDX20Q9UHI6 824 aaKnown RBP12.27□□□□□ -0.45
TPM1-225ENST00000560679 ZNF236Q9UL36 1845 aa12.27□□□□□ -0.45
TPM1-225ENST00000560679 DNM1LO00429 736 aa12.26□□□□□ -0.45
TPM1-225ENST00000560679 IGHA2P01877 340 aa12.26□□□□□ -0.45
TPM1-225ENST00000560679 ASNSP08243 561 aa12.26□□□□□ -0.45
TPM1-225ENST00000560679 TFCP2Q12800 502 aa12.26□□□□□ -0.45
TPM1-225ENST00000560679 MVPQ14764 893 aaKnown RBP12.26□□□□□ -0.45
TPM1-225ENST00000560679 GTF3C2Q8WUA4 911 aaPredicted RBP12.26□□□□□ -0.45
TPM1-225ENST00000560679 ZBTB21Q9ULJ3 1066 aa12.26□□□□□ -0.45
TPM1-225ENST00000560679 NDUFB9Q9Y6M9 179 aa12.26□□□□□ -0.45
TPM1-225ENST00000560679 FLT1P17948 1338 aa12.26□□□□□ -0.45
TPM1-225ENST00000560679 C19orf81C9J6K1 198 aa12.25□□□□□ -0.45
TPM1-225ENST00000560679 USP17L10C9JJH3 530 aa12.25□□□□□ -0.45
TPM1-225ENST00000560679 GSTO1P78417 241 aa12.25□□□□□ -0.45
TPM1-225ENST00000560679 SPATA5Q8NB90 893 aa12.25□□□□□ -0.45
TPM1-225ENST00000560679 LPAR1Q92633 364 aa12.25□□□□□ -0.45
TPM1-225ENST00000560679 PI4KBQ9UBF8 816 aa12.25□□□□□ -0.45
TPM1-225ENST00000560679 ATP11BQ9Y2G3 1177 aa12.25□□□□□ -0.45
TPM1-225ENST00000560679 A0A0G2JMZ2 1700 aa12.25□□□□□ -0.45
TPM1-225ENST00000560679 LDHCP07864 332 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 HOXC6P09630 235 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 CYBAP13498 195 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 ARID4AP29374 1257 aaPredicted RBP12.24□□□□□ -0.45
TPM1-225ENST00000560679 CYP2C19P33261 490 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 MCAMP43121 646 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 SMAD3P84022 425 aaKnown RBP12.24□□□□□ -0.45
TPM1-225ENST00000560679 GRB14Q14449 540 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 SNX17Q15036 470 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 MFSD14CQ5VZR4 134 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 USP38Q8NB14 1042 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 NPLOC4Q8TAT6 608 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 BADQ92934 168 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 EDC3Q96F86 508 aaKnown RBP12.24□□□□□ -0.45
TPM1-225ENST00000560679 C12orf42Q96LP6 360 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 MEIS3Q99687 375 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 PDLIM7Q9NR12 457 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 RAI14Q9P0K7 980 aa12.24□□□□□ -0.45
TPM1-225ENST00000560679 MYO5AQ9Y4I1 1855 aaKnown RBP12.24□□□□□ -0.45
TPM1-225ENST00000560679 CHD9Q3L8U1 2897 aa12.23□□□□□ -0.45
TPM1-225ENST00000560679 SLC15A5A6NIM6 579 aa12.23□□□□□ -0.45
TPM1-225ENST00000560679 MSCO60682 206 aa12.23□□□□□ -0.45
TPM1-225ENST00000560679 FOSL2P15408 326 aa12.23□□□□□ -0.45
TPM1-225ENST00000560679 PTPREP23469 700 aa12.23□□□□□ -0.45
TPM1-225ENST00000560679 TRIM60Q495X7 471 aa12.23□□□□□ -0.45
TPM1-225ENST00000560679 GJC2Q5T442 439 aaPredicted RBP12.23□□□□□ -0.45
TPM1-225ENST00000560679 SH3RF1Q7Z6J0 888 aa12.23□□□□□ -0.45
TPM1-225ENST00000560679 ADGRA1Q86SQ6 560 aa12.23□□□□□ -0.45
TPM1-225ENST00000560679 MAPKAPK5Q8IW41 473 aa12.23□□□□□ -0.45
TPM1-225ENST00000560679 CCAR1Q8IX12 1150 aaKnown RBP12.23□□□□□ -0.45
TPM1-225ENST00000560679 DHX36Q9H2U1 1008 aaKnown RBP12.23□□□□□ -0.45
TPM1-225ENST00000560679 PRDM5Q9NQX1 630 aaPredicted RBP12.23□□□□□ -0.45
TPM1-225ENST00000560679 GINM1Q9NU53 330 aa12.23□□□□□ -0.45
TPM1-225ENST00000560679 AATFQ9NY61 560 aaKnown RBP eCLIP12.23□□□□□ -0.45
TPM1-225ENST00000560679 BTBD7Q9P203 1132 aa12.23□□□□□ -0.45
TPM1-225ENST00000560679 PRKAG2Q9UGJ0 569 aa12.23□□□□□ -0.45
TPM1-225ENST00000560679 RABGAP1Q9Y3P9 1069 aa12.23□□□□□ -0.45
TPM1-225ENST00000560679 TRIM43BA6NCK2 446 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms