RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 HCLS1P14317 486 aaPredicted RBP6□□□□□ -1.45
USP8-211ENST00000560527 GIPRP48546 466 aa6□□□□□ -1.45
USP8-211ENST00000560527 EIF6P56537 245 aaKnown RBP6□□□□□ -1.45
USP8-211ENST00000560527 MAP7Q14244 749 aa6□□□□□ -1.45
USP8-211ENST00000560527 SLFN12Q8IYM2 578 aa6□□□□□ -1.45
USP8-211ENST00000560527 CPLX3Q8WVH0 158 aa6□□□□□ -1.45
USP8-211ENST00000560527 SHDQ96IW2 340 aa6□□□□□ -1.45
USP8-211ENST00000560527 CRBNQ96SW2 442 aa6□□□□□ -1.45
USP8-211ENST00000560527 SEMA6CQ9H3T2 930 aa6□□□□□ -1.45
USP8-211ENST00000560527 PPT2Q9UMR5 302 aa6□□□□□ -1.45
USP8-211ENST00000560527 CORINQ9Y5Q5 1042 aa6□□□□□ -1.45
USP8-211ENST00000560527 BMP3P12645 472 aa5.99□□□□□ -1.45
USP8-211ENST00000560527 RBL2Q08999 1139 aa5.99□□□□□ -1.45
USP8-211ENST00000560527 CDCP2Q5VXM1 449 aa5.99□□□□□ -1.45
USP8-211ENST00000560527 INTS3Q68E01 1043 aaKnown RBP5.99□□□□□ -1.45
USP8-211ENST00000560527 CDPF1Q6NVV7 123 aa5.99□□□□□ -1.45
USP8-211ENST00000560527 TAB3Q8N5C8 712 aaPredicted RBP5.99□□□□□ -1.45
USP8-211ENST00000560527 TMEM40Q8WWA1 233 aa5.99□□□□□ -1.45
USP8-211ENST00000560527 ACSF2Q96CM8 615 aaPredicted RBP5.99□□□□□ -1.45
USP8-211ENST00000560527 TMEM87BQ96K49 555 aa5.99□□□□□ -1.45
USP8-211ENST00000560527 TM9SF2Q99805 663 aa5.99□□□□□ -1.45
USP8-211ENST00000560527 HIRIP3Q9BW71 556 aaPredicted RBP5.99□□□□□ -1.45
USP8-211ENST00000560527 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
USP8-211ENST00000560527 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
USP8-211ENST00000560527 TJP2Q9UDY2 1190 aa5.99□□□□□ -1.45
USP8-211ENST00000560527 SLC22A31A6NKX4 558 aa5.98□□□□□ -1.45
USP8-211ENST00000560527 RNGTTO60942 597 aaKnown RBP5.98□□□□□ -1.45
USP8-211ENST00000560527 LRIG2O94898 1065 aa5.98□□□□□ -1.45
USP8-211ENST00000560527 MAP4P27816 1152 aaKnown RBP5.98□□□□□ -1.45
USP8-211ENST00000560527 YARSP54577 528 aaKnown RBP5.98□□□□□ -1.45
USP8-211ENST00000560527 SLBPQ14493 270 aaKnown RBP eCLIP5.98□□□□□ -1.45
USP8-211ENST00000560527 SGO2Q562F6 1265 aa5.98□□□□□ -1.45
USP8-211ENST00000560527 TNNI3KQ59H18 835 aa5.98□□□□□ -1.45
USP8-211ENST00000560527 SOGA3Q5TF21 947 aa5.98□□□□□ -1.45
USP8-211ENST00000560527 SEZ6L2Q6UXD5 910 aa5.98□□□□□ -1.45
USP8-211ENST00000560527 CLEC10AQ8IUN9 316 aa5.98□□□□□ -1.45
USP8-211ENST00000560527 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.98□□□□□ -1.45
USP8-211ENST00000560527 C19orf47Q8N9M1 422 aaKnown RBP5.98□□□□□ -1.45
USP8-211ENST00000560527 FBLIM1Q8WUP2 373 aa5.98□□□□□ -1.45
USP8-211ENST00000560527 FAM83CQ9BQN1 747 aa5.98□□□□□ -1.45
USP8-211ENST00000560527 SSU72Q9NP77 194 aaKnown RBP5.98□□□□□ -1.45
USP8-211ENST00000560527 FAM95CA0A1B0GW59 222 aa5.97□□□□□ -1.45
USP8-211ENST00000560527 TNFRSF10CO14798 259 aa5.97□□□□□ -1.45
USP8-211ENST00000560527 STK10O94804 968 aaKnown RBP5.97□□□□□ -1.45
USP8-211ENST00000560527 CST3P01034 146 aaPredicted RBP5.97□□□□□ -1.45
USP8-211ENST00000560527 NFICP08651 508 aa5.97□□□□□ -1.45
USP8-211ENST00000560527 H2AFB1P0C5Y9 115 aa5.97□□□□□ -1.45
USP8-211ENST00000560527 H2AFB2P0C5Z0 115 aa5.97□□□□□ -1.45
USP8-211ENST00000560527 RAB6AP20340 208 aa5.97□□□□□ -1.45
USP8-211ENST00000560527 CCNFP41002 786 aa5.97□□□□□ -1.45
USP8-211ENST00000560527 CCDC81Q6ZN84 652 aa5.97□□□□□ -1.45
USP8-211ENST00000560527 LSRQ86X29 649 aaPredicted RBP5.97□□□□□ -1.45
USP8-211ENST00000560527 MFSD2AQ8NA29 543 aa5.97□□□□□ -1.45
USP8-211ENST00000560527 FOXQ1Q9C009 403 aa5.97□□□□□ -1.45
USP8-211ENST00000560527 CNNM2Q9H8M5 875 aa5.97□□□□□ -1.45
USP8-211ENST00000560527 FBRSQ9HAH7 460 aa5.97□□□□□ -1.45
USP8-211ENST00000560527 PRKAG3Q9UGI9 489 aa5.97□□□□□ -1.45
USP8-211ENST00000560527 HYAL3O43820 417 aaPredicted RBP5.96□□□□□ -1.46
USP8-211ENST00000560527 DNAJA2O60884 412 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 COBLO75128 1261 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 NME1P15531 152 aaKnown RBP5.96□□□□□ -1.46
USP8-211ENST00000560527 RXRBP28702 533 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 CASP7P55210 303 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 NKG7Q16617 165 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 NBPF6Q5VWK0 638 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 FBXW10Q5XX13 1052 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 OVOS1Q6IE37 1185 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 PAOXQ6QHF9 649 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 BEND4Q6ZU67 534 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 NLRC3Q7RTR2 1065 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 FAM13CQ8NE31 585 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 ATG4CQ96DT6 458 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 NBPF4Q96M43 638 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 ZNF408Q9H9D4 720 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 RAXQ9Y2V3 346 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 DAGLAQ9Y4D2 1042 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 SLC12A7Q9Y666 1083 aa5.96□□□□□ -1.46
USP8-211ENST00000560527 CHURC1-FNTBB4DL54 471 aa5.95□□□□□ -1.46
USP8-211ENST00000560527 PAX4O43316 350 aa5.95□□□□□ -1.46
USP8-211ENST00000560527 GUCY2CP25092 1073 aa5.95□□□□□ -1.46
USP8-211ENST00000560527 GTF2F1P35269 517 aaKnown RBP eCLIP5.95□□□□□ -1.46
USP8-211ENST00000560527 TXKP42681 527 aa5.95□□□□□ -1.46
USP8-211ENST00000560527 PRAMEF13Q5VWM6 474 aa5.95□□□□□ -1.46
USP8-211ENST00000560527 PRR23CQ6ZRP0 262 aa5.95□□□□□ -1.46
USP8-211ENST00000560527 ARMCX6Q7L4S7 300 aa5.95□□□□□ -1.46
USP8-211ENST00000560527 GIMAP7Q8NHV1 300 aa5.95□□□□□ -1.46
USP8-211ENST00000560527 CYB5D2Q8WUJ1 264 aa5.95□□□□□ -1.46
USP8-211ENST00000560527 TP53INP1Q96A56 240 aa5.95□□□□□ -1.46
USP8-211ENST00000560527 ANAPC16Q96DE5 110 aa5.95□□□□□ -1.46
USP8-211ENST00000560527 KCNF1Q9H3M0 494 aa5.95□□□□□ -1.46
USP8-211ENST00000560527 C1GALT1Q9NS00 363 aa5.95□□□□□ -1.46
USP8-211ENST00000560527 USP35Q9P2H5 1018 aa5.95□□□□□ -1.46
USP8-211ENST00000560527 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
USP8-211ENST00000560527 RGS13O14921 159 aa5.94□□□□□ -1.46
USP8-211ENST00000560527 ETFBP38117 255 aa5.94□□□□□ -1.46
USP8-211ENST00000560527 UBE3DQ7Z6J8 389 aa5.94□□□□□ -1.46
USP8-211ENST00000560527 SLC51AQ86UW1 340 aa5.94□□□□□ -1.46
USP8-211ENST00000560527 CKAP2LQ8IYA6 745 aa5.94□□□□□ -1.46
USP8-211ENST00000560527 CCDC74BQ96LY2 380 aa5.94□□□□□ -1.46
USP8-211ENST00000560527 ANTXR1Q9H6X2 564 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms