RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 CEP126Q9P2H0 1117 aa11.14□□□□□ -0.63
RABGGTA-217ENST00000560521 TTC28Q96AY4 2481 aa11.14□□□□□ -0.63
RABGGTA-217ENST00000560521 CIAO1O76071 339 aa11.13□□□□□ -0.63
RABGGTA-217ENST00000560521 ERVK-9P63128 1117 aa11.13□□□□□ -0.63
RABGGTA-217ENST00000560521 ERVK-24P63145 666 aa11.13□□□□□ -0.63
RABGGTA-217ENST00000560521 JAG1P78504 1218 aa11.13□□□□□ -0.63
RABGGTA-217ENST00000560521 MECOMQ03112 1051 aa11.13□□□□□ -0.63
RABGGTA-217ENST00000560521 MTMR2Q13614 643 aa11.13□□□□□ -0.63
RABGGTA-217ENST00000560521 RASGRF1Q13972 1273 aa11.13□□□□□ -0.63
RABGGTA-217ENST00000560521 PDE3AQ14432 1141 aa11.13□□□□□ -0.63
RABGGTA-217ENST00000560521 MRPL50Q8N5N7 158 aaKnown RBP11.13□□□□□ -0.63
RABGGTA-217ENST00000560521 SYMPKQ92797 1274 aaKnown RBP11.13□□□□□ -0.63
RABGGTA-217ENST00000560521 FBXO3Q9UK99 471 aa11.13□□□□□ -0.63
RABGGTA-217ENST00000560521 RTP1P59025 263 aa11.12□□□□□ -0.63
RABGGTA-217ENST00000560521 TIMM10P62072 90 aa11.12□□□□□ -0.63
RABGGTA-217ENST00000560521 SPTY2D1Q68D10 685 aaPredicted RBP11.12□□□□□ -0.63
RABGGTA-217ENST00000560521 ERICH6Q7L0X2 663 aa11.12□□□□□ -0.63
RABGGTA-217ENST00000560521 PLEKHH3Q7Z736 793 aa11.12□□□□□ -0.63
RABGGTA-217ENST00000560521 LPAR1Q92633 364 aa11.12□□□□□ -0.63
RABGGTA-217ENST00000560521 APBA2Q99767 749 aa11.12□□□□□ -0.63
RABGGTA-217ENST00000560521 PRKAG2Q9UGJ0 569 aa11.12□□□□□ -0.63
RABGGTA-217ENST00000560521 RAPGEFL1Q9UHV5 662 aa11.12□□□□□ -0.63
RABGGTA-217ENST00000560521 COL11A1P12107 1806 aaPredicted RBP11.12□□□□□ -0.63
RABGGTA-217ENST00000560521 PDS5AQ29RF7 1337 aaKnown RBP11.11□□□□□ -0.63
RABGGTA-217ENST00000560521 C19orf81C9J6K1 198 aa11.11□□□□□ -0.63
RABGGTA-217ENST00000560521 SMAD3P84022 425 aaKnown RBP11.11□□□□□ -0.63
RABGGTA-217ENST00000560521 MAP2K5Q13163 448 aa11.11□□□□□ -0.63
RABGGTA-217ENST00000560521 SHROOM1Q2M3G4 852 aaPredicted RBP11.11□□□□□ -0.63
RABGGTA-217ENST00000560521 BADQ92934 168 aa11.11□□□□□ -0.63
RABGGTA-217ENST00000560521 NSUN4Q96CB9 384 aaKnown RBP11.11□□□□□ -0.63
RABGGTA-217ENST00000560521 EDC3Q96F86 508 aaKnown RBP11.11□□□□□ -0.63
RABGGTA-217ENST00000560521 PAGR1Q9BTK6 254 aa11.11□□□□□ -0.63
RABGGTA-217ENST00000560521 TMOD4Q9NZQ9 345 aa11.11□□□□□ -0.63
RABGGTA-217ENST00000560521 DDX20Q9UHI6 824 aaKnown RBP11.11□□□□□ -0.63
RABGGTA-217ENST00000560521 HERC5Q9UII4 1024 aaKnown RBP11.11□□□□□ -0.63
RABGGTA-217ENST00000560521 PA2G4Q9UQ80 394 aaKnown RBP11.11□□□□□ -0.63
RABGGTA-217ENST00000560521 PARP14Q460N5 1801 aa11.11□□□□□ -0.63
RABGGTA-217ENST00000560521 NCOR1O75376 2440 aa11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 MYH8P13535 1937 aa11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 USP17L10C9JJH3 530 aa11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 TNFRSF10AO00220 468 aa11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 DNM1LO00429 736 aa11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 CNMDO75829 334 aa11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 MAP4K4O95819 1239 aaPredicted RBP11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 FOSL2P15408 326 aa11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 IL15P40933 162 aaPredicted RBP11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 GJC2Q5T442 439 aaPredicted RBP11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 SLC39A5Q6ZMH5 540 aa11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 CCAR1Q8IX12 1150 aaKnown RBP11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 TRPV1Q8NER1 839 aa11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 EMILIN3Q9NT22 766 aa11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 ATP11BQ9Y2G3 1177 aa11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 NDUFB9Q9Y6M9 179 aa11.1□□□□□ -0.63
RABGGTA-217ENST00000560521 PTPRCP08575 1304 aa11.09□□□□□ -0.63
RABGGTA-217ENST00000560521 ZNF236Q9UL36 1845 aa11.09□□□□□ -0.63
RABGGTA-217ENST00000560521 IGHA2P01877 340 aa11.09□□□□□ -0.63
RABGGTA-217ENST00000560521 LDHCP07864 332 aa11.09□□□□□ -0.63
RABGGTA-217ENST00000560521 ASNSP08243 561 aa11.09□□□□□ -0.63
RABGGTA-217ENST00000560521 CNGA1P29973 690 aa11.09□□□□□ -0.63
RABGGTA-217ENST00000560521 MFSD14CQ5VZR4 134 aa11.09□□□□□ -0.63
RABGGTA-217ENST00000560521 TBC1D9Q6ZT07 1266 aa11.09□□□□□ -0.63
RABGGTA-217ENST00000560521 SH3RF1Q7Z6J0 888 aa11.09□□□□□ -0.63
RABGGTA-217ENST00000560521 USP38Q8NB14 1042 aa11.09□□□□□ -0.63
RABGGTA-217ENST00000560521 NPLOC4Q8TAT6 608 aa11.09□□□□□ -0.63
RABGGTA-217ENST00000560521 XAGE2Q96GT9 111 aa11.09□□□□□ -0.63
RABGGTA-217ENST00000560521 DNAJC18Q9H819 358 aa11.09□□□□□ -0.63
RABGGTA-217ENST00000560521 PI4KBQ9UBF8 816 aa11.09□□□□□ -0.63
RABGGTA-217ENST00000560521 TRIM43BA6NCK2 446 aa11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 MSCO60682 206 aa11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 GDF11O95390 407 aa11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 PTPREP23469 700 aa11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 CYP2C19P33261 490 aa11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 TJAP1Q5JTD0 557 aa11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 METTL16Q86W50 562 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 TEX11Q8IYF3 940 aa11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 SH3RF3Q8TEJ3 882 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 GTF3C2Q8WUA4 911 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 TRIM43Q96BQ3 446 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 COPRSQ9NQ92 184 aa11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 PRDM5Q9NQX1 630 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 HMG20BQ9P0W2 317 aa11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 RABGAP1Q9Y3P9 1069 aa11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-217ENST00000560521 A0A1B0GUL7 405 aa11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 SLC15A5A6NIM6 579 aa11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 HOXC6P09630 235 aa11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 CYBAP13498 195 aa11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 ITGB8P26012 769 aa11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 GSTO1P78417 241 aa11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 ATP2B2Q01814 1243 aa11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 GRIN2CQ14957 1233 aa11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 SNX17Q15036 470 aa11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 PI16Q6UXB8 463 aa11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 FOXP4Q8IVH2 680 aaPredicted RBP11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 SSH1Q8WYL5 1049 aa11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 DHX36Q9H2U1 1008 aaKnown RBP11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 CWC22Q9HCG8 908 aaKnown RBP11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 PDLIM7Q9NR12 457 aa11.07□□□□□ -0.64
RABGGTA-217ENST00000560521 TMEM265A0A087WTH1 108 aa11.06□□□□□ -0.64
RABGGTA-217ENST00000560521 GLRX3O76003 335 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms