RNA–Protein interactions for RNA: ENST00000560475.1

TRIP4-209, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-209ENST00000560475 HID1Q8IV36 788 aa7.61□□□□□ -1.19
TRIP4-209ENST00000560475 TMEM40Q8WWA1 233 aa7.61□□□□□ -1.19
TRIP4-209ENST00000560475 JAG1P78504 1218 aa7.6□□□□□ -1.19
TRIP4-209ENST00000560475 FGD1P98174 961 aa7.6□□□□□ -1.19
TRIP4-209ENST00000560475 EAPPQ56P03 285 aaPredicted RBP7.6□□□□□ -1.19
TRIP4-209ENST00000560475 PRAMEF13Q5VWM6 474 aa7.6□□□□□ -1.19
TRIP4-209ENST00000560475 MFSD2AQ8NA29 543 aa7.6□□□□□ -1.19
TRIP4-209ENST00000560475 CARS2Q9HA77 564 aaKnown RBP7.6□□□□□ -1.19
TRIP4-209ENST00000560475 ATP13A1Q9HD20 1204 aa7.6□□□□□ -1.19
TRIP4-209ENST00000560475 SEMA3GQ9NS98 782 aa7.6□□□□□ -1.19
TRIP4-209ENST00000560475 GFRA2O00451 464 aa7.59□□□□□ -1.19
TRIP4-209ENST00000560475 FARP2O94887 1054 aaPredicted RBP7.59□□□□□ -1.19
TRIP4-209ENST00000560475 CBX7O95931 251 aa7.59□□□□□ -1.19
TRIP4-209ENST00000560475 CAP2P40123 477 aa7.59□□□□□ -1.19
TRIP4-209ENST00000560475 LETMD1Q6P1Q0 360 aa7.59□□□□□ -1.19
TRIP4-209ENST00000560475 MFSD4AQ8N468 514 aa7.59□□□□□ -1.19
TRIP4-209ENST00000560475 FLAD1Q8NFF5 587 aa7.59□□□□□ -1.19
TRIP4-209ENST00000560475 CTNND2Q9UQB3 1225 aa7.59□□□□□ -1.19
TRIP4-209ENST00000560475 H3BS24 57 aa7.58□□□□□ -1.2
TRIP4-209ENST00000560475 CST3P01034 146 aaPredicted RBP7.58□□□□□ -1.2
TRIP4-209ENST00000560475 RPS26P62854 115 aaKnown RBP7.58□□□□□ -1.2
TRIP4-209ENST00000560475 MEI1Q5TIA1 1274 aa7.58□□□□□ -1.2
TRIP4-209ENST00000560475 FYB2Q5VWT5 728 aa7.58□□□□□ -1.2
TRIP4-209ENST00000560475 AGMOQ6ZNB7 445 aa7.58□□□□□ -1.2
TRIP4-209ENST00000560475 ZSWIM9Q86XI8 627 aa7.58□□□□□ -1.2
TRIP4-209ENST00000560475 LMCD1Q9NZU5 365 aa7.58□□□□□ -1.2
TRIP4-209ENST00000560475 ZNF865P0CJ78 1059 aaPredicted RBP7.57□□□□□ -1.2
TRIP4-209ENST00000560475 LIG3P49916 1009 aa7.57□□□□□ -1.2
TRIP4-209ENST00000560475 KCNMB1Q16558 191 aa7.57□□□□□ -1.2
TRIP4-209ENST00000560475 CCDC27Q2M243 656 aa7.57□□□□□ -1.2
TRIP4-209ENST00000560475 CDH24Q86UP0 819 aa7.57□□□□□ -1.2
TRIP4-209ENST00000560475 DPH2Q9BQC3 489 aaPredicted RBP7.57□□□□□ -1.2
TRIP4-209ENST00000560475 GZF1Q9H116 711 aaPredicted RBP7.57□□□□□ -1.2
TRIP4-209ENST00000560475 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.57□□□□□ -1.2
TRIP4-209ENST00000560475 CAPN6Q9Y6Q1 641 aa7.57□□□□□ -1.2
TRIP4-209ENST00000560475 ZNF503-AS2A6NEH8 195 aa7.56□□□□□ -1.2
TRIP4-209ENST00000560475 TFE3P19532 575 aaPredicted RBP7.56□□□□□ -1.2
TRIP4-209ENST00000560475 C22orf34Q6ZV56 151 aa7.56□□□□□ -1.2
TRIP4-209ENST00000560475 FBXO33Q7Z6M2 555 aa7.56□□□□□ -1.2
TRIP4-209ENST00000560475 JARID2Q92833 1246 aaPredicted RBP7.56□□□□□ -1.2
TRIP4-209ENST00000560475 MIR1-1HGQ9H1L0 117 aa7.56□□□□□ -1.2
TRIP4-209ENST00000560475 TJP2Q9UDY2 1190 aa7.56□□□□□ -1.2
TRIP4-209ENST00000560475 TLR6Q9Y2C9 796 aa7.56□□□□□ -1.2
TRIP4-209ENST00000560475 ST14Q9Y5Y6 855 aa7.56□□□□□ -1.2
TRIP4-209ENST00000560475 LRRC10BA6NIK2 292 aa7.55□□□□□ -1.2
TRIP4-209ENST00000560475 PGRP06401 933 aa7.55□□□□□ -1.2
TRIP4-209ENST00000560475 KSR1Q8IVT5 923 aa7.55□□□□□ -1.2
TRIP4-209ENST00000560475 UBE2FQ969M7 185 aa7.55□□□□□ -1.2
TRIP4-209ENST00000560475 LIN37Q96GY3 246 aaPredicted RBP7.55□□□□□ -1.2
TRIP4-209ENST00000560475 ZSWIM5Q9P217 1185 aa7.55□□□□□ -1.2
TRIP4-209ENST00000560475 PARP2Q9UGN5 583 aa7.55□□□□□ -1.2
TRIP4-209ENST00000560475 AFMP43652 599 aa7.54□□□□□ -1.2
TRIP4-209ENST00000560475 MLANAQ16655 118 aa7.54□□□□□ -1.2
TRIP4-209ENST00000560475 ZNF746Q6NUN9 644 aaPredicted RBP7.54□□□□□ -1.2
TRIP4-209ENST00000560475 CYP7A1P22680 504 aa7.53□□□□□ -1.2
TRIP4-209ENST00000560475 TNK2Q07912 1038 aa7.53□□□□□ -1.2
TRIP4-209ENST00000560475 MESP2Q0VG99 397 aa7.53□□□□□ -1.2
TRIP4-209ENST00000560475 PKN1Q16512 942 aa7.53□□□□□ -1.2
TRIP4-209ENST00000560475 TMEM87BQ96K49 555 aa7.53□□□□□ -1.2
TRIP4-209ENST00000560475 C19orf73Q9NVV2 129 aa7.53□□□□□ -1.2
TRIP4-209ENST00000560475 TACC3Q9Y6A5 838 aa7.53□□□□□ -1.2
TRIP4-209ENST00000560475 F6X3S4 739 aa7.52□□□□□ -1.21
TRIP4-209ENST00000560475 DAB2P98082 770 aa7.52□□□□□ -1.21
TRIP4-209ENST00000560475 PSMD2Q13200 908 aa7.52□□□□□ -1.21
TRIP4-209ENST00000560475 TAF1CQ15572 869 aaPredicted RBP7.52□□□□□ -1.21
TRIP4-209ENST00000560475 TSNAXIP1Q2TAA8 658 aa7.52□□□□□ -1.21
TRIP4-209ENST00000560475 MRPL41Q8IXM3 137 aaKnown RBP7.52□□□□□ -1.21
TRIP4-209ENST00000560475 KIRREL1Q96J84 757 aa7.52□□□□□ -1.21
TRIP4-209ENST00000560475 FAM161BQ96MY7 647 aa7.52□□□□□ -1.21
TRIP4-209ENST00000560475 SLC38A3Q99624 504 aa7.52□□□□□ -1.21
TRIP4-209ENST00000560475 FAM53CQ9NYF3 392 aa7.52□□□□□ -1.21
TRIP4-209ENST00000560475 ARID1BQ8NFD5 2236 aaPredicted RBP7.52□□□□□ -1.21
TRIP4-209ENST00000560475 WASH4PA8MWX3 477 aa7.51□□□□□ -1.21
TRIP4-209ENST00000560475 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.51□□□□□ -1.21
TRIP4-209ENST00000560475 ERCC3P19447 782 aa7.51□□□□□ -1.21
TRIP4-209ENST00000560475 RPL6Q02878 288 aaKnown RBP7.51□□□□□ -1.21
TRIP4-209ENST00000560475 SLC6A19Q695T7 634 aa7.51□□□□□ -1.21
TRIP4-209ENST00000560475 THAP5Q7Z6K1 395 aa7.51□□□□□ -1.21
TRIP4-209ENST00000560475 MCATQ8IVS2 390 aaKnown RBP7.51□□□□□ -1.21
TRIP4-209ENST00000560475 FAM84AQ96KN4 292 aa7.51□□□□□ -1.21
TRIP4-209ENST00000560475 CORINQ9Y5Q5 1042 aa7.51□□□□□ -1.21
TRIP4-209ENST00000560475 DBX1A6NMT0 343 aa7.5□□□□□ -1.21
TRIP4-209ENST00000560475 GLI1P08151 1106 aa7.5□□□□□ -1.21
TRIP4-209ENST00000560475 CTSHP09668 335 aa7.5□□□□□ -1.21
TRIP4-209ENST00000560475 RLBP1P12271 317 aa7.5□□□□□ -1.21
TRIP4-209ENST00000560475 GDNFP39905 211 aa7.5□□□□□ -1.21
TRIP4-209ENST00000560475 KIR3DL1P43629 444 aa7.5□□□□□ -1.21
TRIP4-209ENST00000560475 XPCQ01831 940 aaPredicted RBP7.5□□□□□ -1.21
TRIP4-209ENST00000560475 PDE4BQ07343 736 aa7.5□□□□□ -1.21
TRIP4-209ENST00000560475 TMC4Q7Z404 712 aa7.5□□□□□ -1.21
TRIP4-209ENST00000560475 ACSF2Q96CM8 615 aaPredicted RBP7.5□□□□□ -1.21
TRIP4-209ENST00000560475 UPK3BL1B0FP48 263 aa7.49□□□□□ -1.21
TRIP4-209ENST00000560475 UPK3BL2E5RIL1 263 aa7.49□□□□□ -1.21
TRIP4-209ENST00000560475 TAGLNQ01995 201 aaKnown RBP7.49□□□□□ -1.21
TRIP4-209ENST00000560475 TMEM67Q5HYA8 995 aa7.49□□□□□ -1.21
TRIP4-209ENST00000560475 MPZL3Q6UWV2 235 aa7.49□□□□□ -1.21
TRIP4-209ENST00000560475 BNC2Q6ZN30 1099 aaPredicted RBP7.49□□□□□ -1.21
TRIP4-209ENST00000560475 PRR23BQ6ZRT6 265 aa7.49□□□□□ -1.21
TRIP4-209ENST00000560475 PHC3Q8NDX5 983 aa7.49□□□□□ -1.21
TRIP4-209ENST00000560475 COX4I2Q96KJ9 171 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms