RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 C8orf34Q49A92 452 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 FAM47CQ5HY64 1035 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 LRWD1Q9UFC0 647 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 ZMYM4Q5VZL5 1548 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 ARHGEF16Q5VV41 709 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 IL17REQ8NFR9 667 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 MCM6Q14566 821 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 STMN4Q9H169 189 aaPredicted RBP15.03■□□□□ -0
TRAF3-208ENST00000560371 INSRP06213 1382 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 DAPK3O43293 454 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 GAS7O60861 476 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 CSGALNACT2Q8N6G5 542 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 KCNG1Q9UIX4 513 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 CCDC25Q86WR0 208 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 METTL13Q8N6R0 699 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 MAP3K15Q6ZN16 1313 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 TCP10L2B9ZVM9 353 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 TICAM2Q86XR7 235 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 ODF2LQ9ULJ1 636 aa15.03■□□□□ -0
TRAF3-208ENST00000560371 hCG_1642624A0A1W2PR95 340 aa15.02■□□□□ -0
TRAF3-208ENST00000560371 RAD51AP2Q09MP3 1159 aa15.02■□□□□ -0
TRAF3-208ENST00000560371 VPS16Q9H269 839 aa15.02■□□□□ -0
TRAF3-208ENST00000560371 CAPZA3Q96KX2 299 aa15.02■□□□□ -0
TRAF3-208ENST00000560371 SPOPO43791 374 aa15.02■□□□□ -0
TRAF3-208ENST00000560371 TNFAIP3P21580 790 aa15.02■□□□□ -0
TRAF3-208ENST00000560371 CRKLP46109 303 aaKnown RBP15.02■□□□□ -0
TRAF3-208ENST00000560371 MLH3Q9UHC1 1453 aa15.02□□□□□ -0.01
TRAF3-208ENST00000560371 TESPA1A2RU30 521 aaPredicted RBP15.02□□□□□ -0.01
TRAF3-208ENST00000560371 CUTAO60888 179 aa15.02□□□□□ -0.01
TRAF3-208ENST00000560371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.02□□□□□ -0.013e-14■■■■■ 27.4
TRAF3-208ENST00000560371 BCAMP50895 628 aa15.02□□□□□ -0.01
TRAF3-208ENST00000560371 BMS1Q14692 1282 aaKnown RBP15.02□□□□□ -0.01
TRAF3-208ENST00000560371 INF2Q27J81 1249 aa15.02□□□□□ -0.01
TRAF3-208ENST00000560371 CSRNP2Q9H175 543 aa15.02□□□□□ -0.01
TRAF3-208ENST00000560371 SNX14Q9Y5W7 946 aa15.02□□□□□ -0.01
TRAF3-208ENST00000560371 ASAP1Q9ULH1 1129 aa15.02□□□□□ -0.01
TRAF3-208ENST00000560371 AKR1B15C9JRZ8 316 aaPredicted RBP15.01□□□□□ -0.01
TRAF3-208ENST00000560371 LPXNO60711 386 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 PPARAQ07869 468 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 USPL1Q5W0Q7 1092 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 TPH2Q8IWU9 490 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 VPS54Q9P1Q0 977 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 CNGA1P29973 690 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 TUBB4BP68371 445 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 SDR42E1Q8WUS8 393 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 MLXIPQ9HAP2 919 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 KCNQ3O43525 872 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 SEL1L2Q5TEA6 688 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 DSCC1Q9BVC3 393 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 MTRF1LQ9UGC7 380 aaKnown RBP15.01□□□□□ -0.01
TRAF3-208ENST00000560371 E7EVH7 732 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 ZBTB16Q05516 673 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 KARSQ15046 597 aaKnown RBP15.01□□□□□ -0.01
TRAF3-208ENST00000560371 ANKRD35Q8N283 1001 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 ERBB4Q15303 1308 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 SMCO2A6NFE2 343 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 E7EWF7 191 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 ZNF569Q5MCW4 686 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 CFAP58Q5T655 872 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 TBC1D7Q9P0N9 293 aa15.01□□□□□ -0.01
TRAF3-208ENST00000560371 KDRP35968 1356 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 ZNF804BA4D1E1 1349 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 RRP9O43818 475 aaKnown RBP15□□□□□ -0.01
TRAF3-208ENST00000560371 KRT19P08727 400 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 PRIMPOLQ96LW4 560 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 HAUS7Q99871 368 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 PCCAP05165 728 aaPredicted RBP15□□□□□ -0.01
TRAF3-208ENST00000560371 ARHGEF5Q12774 1597 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 ALAS1P13196 640 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 CCDC122Q5T0U0 273 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 LIN9Q5TKA1 542 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 ZNF654Q8IZM8 581 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15□□□□□ -0.01
TRAF3-208ENST00000560371 EXOC3O60645 756 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 CALCOCO2Q13137 446 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 MXRA7P84157 204 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 KRT27Q7Z3Y8 459 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 FBF1Q8TES7 1133 aa15□□□□□ -0.01
TRAF3-208ENST00000560371 NAP1L3Q99457 506 aaPredicted RBP15□□□□□ -0.01
TRAF3-208ENST00000560371 IL6STP40189 918 aaPredicted RBP14.99□□□□□ -0.01
TRAF3-208ENST00000560371 DYMQ7RTS9 669 aa14.99□□□□□ -0.01
TRAF3-208ENST00000560371 SRRTQ9BXP5 876 aaKnown RBP14.99□□□□□ -0.01
TRAF3-208ENST00000560371 USP44Q9H0E7 712 aa14.99□□□□□ -0.01
TRAF3-208ENST00000560371 VAV2P52735 878 aa14.99□□□□□ -0.01
TRAF3-208ENST00000560371 NOLC1Q14978 699 aaKnown RBP eCLIP14.99□□□□□ -0.01
TRAF3-208ENST00000560371 ZNF202O95125 648 aa14.99□□□□□ -0.01
TRAF3-208ENST00000560371 TUBB4AP04350 444 aa14.99□□□□□ -0.01
TRAF3-208ENST00000560371 CHRNDQ07001 517 aa14.99□□□□□ -0.01
TRAF3-208ENST00000560371 NSRP1Q9H0G5 558 aaKnown RBP14.99□□□□□ -0.01
TRAF3-208ENST00000560371 RASA3Q14644 834 aa14.99□□□□□ -0.01
TRAF3-208ENST00000560371 OTUD7BQ6GQQ9 843 aa14.99□□□□□ -0.01
TRAF3-208ENST00000560371 FLOT1O75955 427 aa14.99□□□□□ -0.01
TRAF3-208ENST00000560371 BAG1Q99933 345 aaPredicted RBP14.99□□□□□ -0.01
TRAF3-208ENST00000560371 NT5C3AQ9H0P0 336 aa14.99□□□□□ -0.01
TRAF3-208ENST00000560371 PSTPIP2Q9H939 334 aa14.99□□□□□ -0.01
TRAF3-208ENST00000560371 NPHP4O75161 1426 aaPredicted RBP14.99□□□□□ -0.01
TRAF3-208ENST00000560371 SYNRGQ9UMZ2 1314 aa14.99□□□□□ -0.01
TRAF3-208ENST00000560371 PAK1Q13153 545 aa14.99□□□□□ -0.01
TRAF3-208ENST00000560371 EDC3Q96F86 508 aaKnown RBP14.99□□□□□ -0.01
TRAF3-208ENST00000560371 PCDHA12Q9UN75 941 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms