RNA–Protein interactions for RNA: ENST00000560321.5

KNSTRN-210, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-210ENST00000560321 USP17L10C9JJH3 530 aa23.79■■□□□ 1.4
KNSTRN-210ENST00000560321 SMARCA5O60264 1052 aaPredicted RBP23.79■■□□□ 1.4
KNSTRN-210ENST00000560321 ADD2P35612 726 aa23.79■■□□□ 1.4
KNSTRN-210ENST00000560321 BACE1P56817 501 aa23.79■■□□□ 1.4
KNSTRN-210ENST00000560321 AAMPQ13685 434 aa23.79■■□□□ 1.4
KNSTRN-210ENST00000560321 UBE3CQ15386 1083 aa23.79■■□□□ 1.4
KNSTRN-210ENST00000560321 CERKLQ49MI3 558 aaPredicted RBP23.79■■□□□ 1.4
KNSTRN-210ENST00000560321 SH3D19Q5HYK7 790 aa23.79■■□□□ 1.4
KNSTRN-210ENST00000560321 RAET1EQ8TD07 263 aa23.79■■□□□ 1.4
KNSTRN-210ENST00000560321 MCM9Q9NXL9 1143 aa23.79■■□□□ 1.4
KNSTRN-210ENST00000560321 ZBTB21Q9ULJ3 1066 aa23.79■■□□□ 1.4
KNSTRN-210ENST00000560321 PTCH2Q9Y6C5 1203 aa23.79■■□□□ 1.4
KNSTRN-210ENST00000560321 KIAA0100Q14667 2235 aaKnown RBP23.78■■□□□ 1.4
KNSTRN-210ENST00000560321 ERC2O15083 957 aa23.78■■□□□ 1.4
KNSTRN-210ENST00000560321 BCRP11274 1271 aa23.78■■□□□ 1.4
KNSTRN-210ENST00000560321 IRX3P78415 501 aaPredicted RBP23.78■■□□□ 1.4
KNSTRN-210ENST00000560321 SLC4A8Q2Y0W8 1093 aa23.78■■□□□ 1.4
KNSTRN-210ENST00000560321 CCDC84Q86UT8 332 aaPredicted RBP23.78■■□□□ 1.4
KNSTRN-210ENST00000560321 ATP8A2Q9NTI2 1148 aa23.78■■□□□ 1.4
KNSTRN-210ENST00000560321 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.78■■□□□ 1.4
KNSTRN-210ENST00000560321 SRRDQ9UH36 339 aa23.78■■□□□ 1.4
KNSTRN-210ENST00000560321 GDF11O95390 407 aa23.77■■□□□ 1.4
KNSTRN-210ENST00000560321 MTMR2Q13614 643 aa23.77■■□□□ 1.4
KNSTRN-210ENST00000560321 TATDN1Q6P1N9 297 aa23.77■■□□□ 1.4
KNSTRN-210ENST00000560321 FEZ1Q99689 392 aa23.77■■□□□ 1.4
KNSTRN-210ENST00000560321 ARHGAP39Q9C0H5 1083 aa23.77■■□□□ 1.4
KNSTRN-210ENST00000560321 DNAJC18Q9H819 358 aa23.77■■□□□ 1.4
KNSTRN-210ENST00000560321 TCRBV5S4A2TA0A5A2 114 aa23.76■■□□□ 1.39
KNSTRN-210ENST00000560321 ABCB5Q2M3G0 1257 aa23.76■■□□□ 1.39
KNSTRN-210ENST00000560321 MYPNQ86TC9 1320 aa23.76■■□□□ 1.39
KNSTRN-210ENST00000560321 BAZ2AQ9UIF9 1905 aaKnown RBP23.76■■□□□ 1.39
KNSTRN-210ENST00000560321 ZSWIM8A7E2V4 1837 aa23.75■■□□□ 1.39
KNSTRN-210ENST00000560321 GH2P01242 217 aa23.75■■□□□ 1.39
KNSTRN-210ENST00000560321 USP14P54578 494 aa23.75■■□□□ 1.39
KNSTRN-210ENST00000560321 RRP1BQ14684 758 aaKnown RBP23.75■■□□□ 1.39
KNSTRN-210ENST00000560321 FAM110CQ1W6H9 321 aa23.75■■□□□ 1.39
KNSTRN-210ENST00000560321 TREML2Q5T2D2 321 aa23.75■■□□□ 1.39
KNSTRN-210ENST00000560321 GTF3C2Q8WUA4 911 aaPredicted RBP23.75■■□□□ 1.39
KNSTRN-210ENST00000560321 COA7Q96BR5 231 aa23.75■■□□□ 1.39
KNSTRN-210ENST00000560321 EDC3Q96F86 508 aaKnown RBP23.75■■□□□ 1.39
KNSTRN-210ENST00000560321 TRIM47Q96LD4 638 aa23.75■■□□□ 1.39
KNSTRN-210ENST00000560321 SWAP70Q9UH65 585 aa23.75■■□□□ 1.39
KNSTRN-210ENST00000560321 TTC41PQ6P2S7 1318 aa23.75■■□□□ 1.39
KNSTRN-210ENST00000560321 DDX60LQ5H9U9 1706 aaKnown RBP23.75■■□□□ 1.39
KNSTRN-210ENST00000560321 TNPO2O14787 897 aaKnown RBP23.74■■□□□ 1.39
KNSTRN-210ENST00000560321 MBD4O95243 580 aa23.74■■□□□ 1.39
KNSTRN-210ENST00000560321 ZFYP08048 801 aaPredicted RBP23.74■■□□□ 1.39
KNSTRN-210ENST00000560321 RAB3GAP1Q15042 981 aa23.74■■□□□ 1.39
KNSTRN-210ENST00000560321 USP17L2Q6R6M4 530 aa23.74■■□□□ 1.39
KNSTRN-210ENST00000560321 LCORLQ8N3X6 602 aa23.74■■□□□ 1.39
KNSTRN-210ENST00000560321 ANKRD13CQ8N6S4 541 aa23.74■■□□□ 1.39
KNSTRN-210ENST00000560321 DCP1AQ9NPI6 582 aaPredicted RBP23.74■■□□□ 1.39
KNSTRN-210ENST00000560321 PDE4DIPQ5VU43 2346 aa23.73■■□□□ 1.39
KNSTRN-210ENST00000560321 ECM2O94769 699 aaPredicted RBP23.73■■□□□ 1.39
KNSTRN-210ENST00000560321 SDR42E1Q8WUS8 393 aa23.73■■□□□ 1.39
KNSTRN-210ENST00000560321 ZNF333Q96JL9 665 aa23.73■■□□□ 1.39
KNSTRN-210ENST00000560321 ARMT1Q9H993 441 aa23.73■■□□□ 1.39
KNSTRN-210ENST00000560321 HOXA7P31268 230 aaPredicted RBP23.72■■□□□ 1.39
KNSTRN-210ENST00000560321 PLCD1P51178 756 aa23.72■■□□□ 1.39
KNSTRN-210ENST00000560321 ASCC2Q9H1I8 757 aaPredicted RBP23.72■■□□□ 1.39
KNSTRN-210ENST00000560321 BIN2Q9UBW5 565 aaPredicted RBP23.72■■□□□ 1.39
KNSTRN-210ENST00000560321 PCDHB15Q9Y5E8 787 aa23.72■■□□□ 1.39
KNSTRN-210ENST00000560321 DOCK3Q8IZD9 2030 aa23.71■■□□□ 1.39
KNSTRN-210ENST00000560321 GRK4P32298 578 aa23.71■■□□□ 1.39
KNSTRN-210ENST00000560321 UBXN2AP68543 259 aa23.71■■□□□ 1.39
KNSTRN-210ENST00000560321 CAP1Q01518 475 aa23.71■■□□□ 1.39
KNSTRN-210ENST00000560321 CCAR1Q8IX12 1150 aaKnown RBP23.71■■□□□ 1.39
KNSTRN-210ENST00000560321 KBTBD3Q8NAB2 608 aa23.71■■□□□ 1.39
KNSTRN-210ENST00000560321 SLAIN1Q8ND83 568 aa23.71■■□□□ 1.39
KNSTRN-210ENST00000560321 GCC1Q96CN9 775 aa23.71■■□□□ 1.39
KNSTRN-210ENST00000560321 SLC4A4Q9Y6R1 1079 aa23.71■■□□□ 1.39
KNSTRN-210ENST00000560321 MPHOSPH10O00566 681 aaKnown RBP23.7■■□□□ 1.38
KNSTRN-210ENST00000560321 GLRX3O76003 335 aaKnown RBP23.7■■□□□ 1.38
KNSTRN-210ENST00000560321 CRBNQ96SW2 442 aa23.7■■□□□ 1.38
KNSTRN-210ENST00000560321 GNAT2P19087 354 aa23.68■■□□□ 1.38
KNSTRN-210ENST00000560321 SHMT1P34896 483 aa23.68■■□□□ 1.38
KNSTRN-210ENST00000560321 GABPAQ06546 454 aa23.68■■□□□ 1.38
KNSTRN-210ENST00000560321 TMEM179Q6ZVK1 233 aa23.68■■□□□ 1.38
KNSTRN-210ENST00000560321 NKX2-3Q8TAU0 364 aa23.68■■□□□ 1.38
KNSTRN-210ENST00000560321 SH3TC2Q8TF17 1288 aa23.68■■□□□ 1.38
KNSTRN-210ENST00000560321 CCDC17Q96LX7 622 aa23.68■■□□□ 1.38
KNSTRN-210ENST00000560321 KIAA1683Q9H0B3 1180 aa23.68■■□□□ 1.38
KNSTRN-210ENST00000560321 SH2D4AQ9H788 454 aa23.68■■□□□ 1.38
KNSTRN-210ENST00000560321 ARPP21Q9UBL0 812 aaPredicted RBP23.68■■□□□ 1.38
KNSTRN-210ENST00000560321 PRKCZQ05513 592 aa23.67■■□□□ 1.38
KNSTRN-210ENST00000560321 GPRC5AQ8NFJ5 357 aa23.67■■□□□ 1.38
KNSTRN-210ENST00000560321 APPBP2Q92624 585 aa23.67■■□□□ 1.38
KNSTRN-210ENST00000560321 C12orf42Q96LP6 360 aa23.67■■□□□ 1.38
KNSTRN-210ENST00000560321 USP17L15C9J2P7 530 aa23.66■■□□□ 1.38
KNSTRN-210ENST00000560321 USP17L13C9JLJ4 530 aa23.66■■□□□ 1.38
KNSTRN-210ENST00000560321 USP17L11C9JVI0 530 aa23.66■■□□□ 1.38
KNSTRN-210ENST00000560321 USP17L18D6R9N7 530 aa23.66■■□□□ 1.38
KNSTRN-210ENST00000560321 USP17L22D6RA61 530 aa23.66■■□□□ 1.38
KNSTRN-210ENST00000560321 USP17L17D6RBQ6 530 aa23.66■■□□□ 1.38
KNSTRN-210ENST00000560321 USP17L19D6RCP7 530 aa23.66■■□□□ 1.38
KNSTRN-210ENST00000560321 USP17L20D6RJB6 530 aa23.66■■□□□ 1.38
KNSTRN-210ENST00000560321 RNF113AO15541 343 aaKnown RBP23.66■■□□□ 1.38
KNSTRN-210ENST00000560321 MX1P20591 662 aa23.66■■□□□ 1.38
KNSTRN-210ENST00000560321 CTGFP29279 349 aa23.66■■□□□ 1.38
KNSTRN-210ENST00000560321 HERVK_113P62684 666 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms