RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SCAND2PQ9GZW5 306 aaPredicted RBP6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 CLSTN2Q9H4D0 955 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 QTRT2Q9H974 415 aaKnown RBP6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 ZFP64Q9NPA5 681 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 PGPEP1Q9NXJ5 209 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 PSD3Q9NYI0 1048 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 CWC15Q9P013 229 aaKnown RBP6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 FEZ2Q9UHY8 353 aaPredicted RBP6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 PALD1Q9ULE6 856 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 MLH3Q9UHC1 1453 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 C3P01024 1663 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 NPHP3Q7Z494 1330 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 TNFRSF10BO14763 440 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 LILRA1O75019 489 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 GNAI3P08754 354 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 CAPN2P17655 700 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 BRD2P25440 801 aaKnown RBP6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 ADD1P35611 737 aaKnown RBP6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 IRX3P78415 501 aaPredicted RBP6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 RELBQ01201 579 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 DNM1Q05193 864 aaKnown RBP6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 GPS2Q13227 327 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 VPS53Q5VIR6 699 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 FBXO38Q6PIJ6 1188 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 IQUBQ8NA54 791 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 C8orf58Q8NAV2 365 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 SPC24Q8NBT2 197 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 KCNB2Q92953 911 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 CHAMP1Q96JM3 812 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 AGBL1Q96MI9 1066 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 ALDH8A1Q9H2A2 487 aaPredicted RBP6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 GGNBP2Q9H3C7 697 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 CBX8Q9HC52 389 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 BRMS1Q9HCU9 246 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 RNF19AQ9NV58 838 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 CABP1Q9NZU7 370 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 IMPACTQ9P2X3 320 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 WWC3Q9ULE0 1092 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 LRFN2Q9ULH4 789 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 POLIQ9UNA4 740 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 MTMR6Q9Y217 621 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 HCN4Q9Y3Q4 1203 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 USP3Q9Y6I4 520 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 NALCNQ8IZF0 1738 aa6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 USP42Q9H9J4 1324 aaKnown RBP6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 CEP170BQ9Y4F5 1589 aaPredicted RBP6.95□□□□□ -1.3
SNRPA1-209ENST00000560307 TMEM131LA2VDJ0 1609 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 ZBTB39O15060 712 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 GPR182O15218 404 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 SGSM2O43147 1006 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 FIBPO43427 364 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 NRDCO43847 1150 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 SORBS3O60504 671 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 RAB11FIP3O75154 756 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 GNAI2P04899 355 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 IL13P35225 146 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 HDLBPQ00341 1268 aaKnown RBP6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 MRPL58Q14197 206 aaKnown RBP6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 LRRC8AQ8IWT6 810 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 DRC7Q8IY82 874 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 MSL3Q8N5Y2 521 aaKnown RBP6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 CCDC150Q8NCX0 1101 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 RNF217Q8TC41 542 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 CNKSR1Q969H4 720 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 TNMDQ9H2S6 317 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 GEMIN8Q9NWZ8 242 aaKnown RBP6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 CLIP2Q9UDT6 1046 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 ZNF215Q9UL58 517 aaPredicted RBP6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 SNX14Q9Y5W7 946 aa6.94□□□□□ -1.3
SNRPA1-209ENST00000560307 PNMA6FA0A0J9YX94 578 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 SERTM1A2A2V5 107 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 CHL1O00533 1208 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 OIP5O43482 229 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 ZRANB2O95218 330 aaKnown RBP eCLIP6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 IL2RAP01589 272 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 AK2P54819 239 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 RAD51AP2Q09MP3 1159 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 DGKZQ13574 1117 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 DSC3Q14574 896 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 SF3A1Q15459 793 aaKnown RBP6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 ANO6Q4KMQ2 910 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 SH3PXD2AQ5TCZ1 1133 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 Q6ZVU0 165 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 TEX2Q8IWB9 1127 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 CCAR2Q8N163 923 aaKnown RBP6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 STAG2Q8N3U4 1231 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 GOLGA6L1Q8N7Z2 621 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 TTC16Q8NEE8 873 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 CACTINQ8WUQ7 758 aaKnown RBP6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 EDEM1Q92611 657 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 ZNF837Q96EG3 531 aaPredicted RBP6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 SETDB2Q96T68 719 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 MEIS3Q99687 375 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 UBXN6Q9BZV1 441 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 TRIM5Q9C035 493 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 RASSF4Q9H2L5 321 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 LRRC4BQ9NT99 713 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 POLKQ9UBT6 870 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms