RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 FCGRTP55899 365 aa28.14■■■□□ 2.1
CRNDE-209ENST00000560208 AAMPQ13685 434 aa28.14■■■□□ 2.1
CRNDE-209ENST00000560208 SH3D19Q5HYK7 790 aa28.14■■■□□ 2.1
CRNDE-209ENST00000560208 EDC3Q96F86 508 aaKnown RBP28.14■■■□□ 2.1
CRNDE-209ENST00000560208 LRRCC1Q9C099 1032 aa28.14■■■□□ 2.1
CRNDE-209ENST00000560208 GINM1Q9NU53 330 aa28.14■■■□□ 2.1
CRNDE-209ENST00000560208 PNMA3Q9UL41 463 aa28.14■■■□□ 2.1
CRNDE-209ENST00000560208 MKI67P46013 3256 aaKnown RBP28.14■■■□□ 2.09
CRNDE-209ENST00000560208 GDF11O95390 407 aa28.13■■■□□ 2.09
CRNDE-209ENST00000560208 ATP5JP18859 108 aa28.13■■■□□ 2.09
CRNDE-209ENST00000560208 SHROOM1Q2M3G4 852 aaPredicted RBP28.13■■■□□ 2.09
CRNDE-209ENST00000560208 BOLA2Q9H3K6 86 aa28.13■■■□□ 2.09
CRNDE-209ENST00000560208 MYPNQ86TC9 1320 aa28.13■■■□□ 2.09
CRNDE-209ENST00000560208 PABPC4Q13310 644 aaKnown RBP eCLIP28.12■■■□□ 2.09
CRNDE-209ENST00000560208 RAET1EQ8TD07 263 aa28.12■■■□□ 2.09
CRNDE-209ENST00000560208 PAG1Q9NWQ8 432 aa28.12■■■□□ 2.09
CRNDE-209ENST00000560208 ZBTB21Q9ULJ3 1066 aa28.12■■■□□ 2.09
CRNDE-209ENST00000560208 ZNF532Q9HCE3 1301 aa28.12■■■□□ 2.09
CRNDE-209ENST00000560208 DOCK3Q8IZD9 2030 aa28.11■■■□□ 2.09
CRNDE-209ENST00000560208 MYCP01106 439 aaPredicted RBP28.11■■■□□ 2.09
CRNDE-209ENST00000560208 EN2P19622 333 aaPredicted RBP28.11■■■□□ 2.09
CRNDE-209ENST00000560208 MTMR2Q13614 643 aa28.11■■■□□ 2.09
CRNDE-209ENST00000560208 TTC6Q86TZ1 520 aa28.11■■■□□ 2.09
CRNDE-209ENST00000560208 SERPINB13Q9UIV8 391 aa28.11■■■□□ 2.09
CRNDE-209ENST00000560208 TCRBV5S4A2TA0A5A2 114 aa28.1■■■□□ 2.09
CRNDE-209ENST00000560208 BACE1P56817 501 aa28.1■■■□□ 2.09
CRNDE-209ENST00000560208 ANKRD13CQ8N6S4 541 aa28.1■■■□□ 2.09
CRNDE-209ENST00000560208 CRNKL1Q9BZJ0 848 aaKnown RBP28.1■■■□□ 2.09
CRNDE-209ENST00000560208 EHD4Q9H223 541 aa28.1■■■□□ 2.09
CRNDE-209ENST00000560208 NAV1Q8NEY1 1877 aa28.1■■■□□ 2.09
CRNDE-209ENST00000560208 PRKCZQ05513 592 aa28.09■■■□□ 2.09
CRNDE-209ENST00000560208 TATDN1Q6P1N9 297 aa28.09■■■□□ 2.09
CRNDE-209ENST00000560208 HAUS7Q99871 368 aa28.09■■■□□ 2.09
CRNDE-209ENST00000560208 TMOD4Q9NZQ9 345 aa28.09■■■□□ 2.09
CRNDE-209ENST00000560208 C19orf81C9J6K1 198 aa28.08■■■□□ 2.09
CRNDE-209ENST00000560208 GRK4P32298 578 aa28.08■■■□□ 2.09
CRNDE-209ENST00000560208 HDAC1Q13547 482 aaPredicted RBP28.08■■■□□ 2.09
CRNDE-209ENST00000560208 ASCC2Q9H1I8 757 aaPredicted RBP28.08■■■□□ 2.09
CRNDE-209ENST00000560208 MYH7P12883 1935 aa28.08■■■□□ 2.09
CRNDE-209ENST00000560208 DDX60LQ5H9U9 1706 aaKnown RBP28.07■■■□□ 2.08
CRNDE-209ENST00000560208 USP17L10C9JJH3 530 aa28.07■■■□□ 2.08
CRNDE-209ENST00000560208 GH2P01242 217 aa28.07■■■□□ 2.08
CRNDE-209ENST00000560208 POLR3DP05423 398 aaPredicted RBP28.07■■■□□ 2.08
CRNDE-209ENST00000560208 GCLCP48506 637 aaPredicted RBP28.07■■■□□ 2.08
CRNDE-209ENST00000560208 GABRQQ9UN88 632 aa28.07■■■□□ 2.08
CRNDE-209ENST00000560208 TNPO2O14787 897 aaKnown RBP28.06■■■□□ 2.08
CRNDE-209ENST00000560208 PLCD1P51178 756 aa28.06■■■□□ 2.08
CRNDE-209ENST00000560208 FAM110CQ1W6H9 321 aa28.06■■■□□ 2.08
CRNDE-209ENST00000560208 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.06■■■□□ 2.08
CRNDE-209ENST00000560208 ADD2P35612 726 aa28.05■■■□□ 2.08
CRNDE-209ENST00000560208 CERKLQ49MI3 558 aaPredicted RBP28.05■■■□□ 2.08
CRNDE-209ENST00000560208 LCORLQ8N3X6 602 aa28.05■■■□□ 2.08
CRNDE-209ENST00000560208 RWDD1Q9H446 243 aaPredicted RBP28.05■■■□□ 2.08
CRNDE-209ENST00000560208 MCM9Q9NXL9 1143 aa28.05■■■□□ 2.08
CRNDE-209ENST00000560208 CENPBP07199 599 aaPredicted RBP28.04■■■□□ 2.08
CRNDE-209ENST00000560208 HOXA7P31268 230 aaPredicted RBP28.04■■■□□ 2.08
CRNDE-209ENST00000560208 IRX3P78415 501 aaPredicted RBP28.04■■■□□ 2.08
CRNDE-209ENST00000560208 SLFNL1Q499Z3 407 aa28.04■■■□□ 2.08
CRNDE-209ENST00000560208 SDR42E1Q8WUS8 393 aa28.04■■■□□ 2.08
CRNDE-209ENST00000560208 ARMT1Q9H993 441 aa28.04■■■□□ 2.08
CRNDE-209ENST00000560208 FLT3LGP49771 235 aa28.03■■■□□ 2.08
CRNDE-209ENST00000560208 MTFR1Q15390 333 aa28.03■■■□□ 2.08
CRNDE-209ENST00000560208 PRPF38BQ5VTL8 546 aaKnown RBP28.03■■■□□ 2.08
CRNDE-209ENST00000560208 BIN2Q9UBW5 565 aaPredicted RBP28.03■■■□□ 2.08
CRNDE-209ENST00000560208 IGHDP01880 384 aa28.02■■■□□ 2.08
CRNDE-209ENST00000560208 SHMT1P34896 483 aa28.02■■■□□ 2.08
CRNDE-209ENST00000560208 ABCB5Q2M3G0 1257 aa28.02■■■□□ 2.08
CRNDE-209ENST00000560208 ANKRD45Q5TZF3 282 aa28.02■■■□□ 2.08
CRNDE-209ENST00000560208 COA7Q96BR5 231 aa28.02■■■□□ 2.08
CRNDE-209ENST00000560208 P2RX7Q99572 595 aaKnown RBP28.02■■■□□ 2.08
CRNDE-209ENST00000560208 DCP1AQ9NPI6 582 aaPredicted RBP28.02■■■□□ 2.08
CRNDE-209ENST00000560208 EMILIN3Q9NT22 766 aa28.02■■■□□ 2.08
CRNDE-209ENST00000560208 ZBTB47Q9UFB7 747 aaPredicted RBP28.02■■■□□ 2.08
CRNDE-209ENST00000560208 BAZ2AQ9UIF9 1905 aaKnown RBP28.01■■■□□ 2.07
CRNDE-209ENST00000560208 MBD4O95243 580 aa28.01■■■□□ 2.07
CRNDE-209ENST00000560208 RAB3GAP1Q15042 981 aa28.01■■■□□ 2.07
CRNDE-209ENST00000560208 USP17L2Q6R6M4 530 aa28.01■■■□□ 2.07
CRNDE-209ENST00000560208 SLAIN1Q8ND83 568 aa28.01■■■□□ 2.07
CRNDE-209ENST00000560208 GCC1Q96CN9 775 aa28.01■■■□□ 2.07
CRNDE-209ENST00000560208 CABP5Q9NP86 173 aa28.01■■■□□ 2.07
CRNDE-209ENST00000560208 ECHDC1Q9NTX5 307 aa28.01■■■□□ 2.07
CRNDE-209ENST00000560208 ADCY3O60266 1144 aa28■■■□□ 2.07
CRNDE-209ENST00000560208 EVX2Q03828 476 aa28■■■□□ 2.07
CRNDE-209ENST00000560208 GABPAQ06546 454 aa28■■■□□ 2.07
CRNDE-209ENST00000560208 PRKAB2O43741 272 aa27.99■■■□□ 2.07
CRNDE-209ENST00000560208 UBXN2AP68543 259 aa27.99■■■□□ 2.07
CRNDE-209ENST00000560208 IRF5Q13568 498 aa27.99■■■□□ 2.07
CRNDE-209ENST00000560208 UBE3CQ15386 1083 aa27.99■■■□□ 2.07
CRNDE-209ENST00000560208 FEZ1Q99689 392 aa27.99■■■□□ 2.07
CRNDE-209ENST00000560208 ATP8A2Q9NTI2 1148 aa27.99■■■□□ 2.07
CRNDE-209ENST00000560208 MORF4L1Q9UBU8 362 aa27.99■■■□□ 2.07
CRNDE-209ENST00000560208 MYH8P13535 1937 aa27.98■■■□□ 2.07
CRNDE-209ENST00000560208 CHGBP05060 677 aa27.98■■■□□ 2.07
CRNDE-209ENST00000560208 CCL5P13501 91 aa27.98■■■□□ 2.07
CRNDE-209ENST00000560208 HERVK_113P62684 666 aa27.98■■■□□ 2.07
CRNDE-209ENST00000560208 ZSCAN25Q6NSZ9 544 aa27.98■■■□□ 2.07
CRNDE-209ENST00000560208 CYP2D6P10635 497 aa27.97■■■□□ 2.07
CRNDE-209ENST00000560208 ZYXQ15942 572 aaKnown RBP27.97■■■□□ 2.07
CRNDE-209ENST00000560208 B4GALNT3Q6L9W6 998 aa27.97■■■□□ 2.07
CRNDE-209ENST00000560208 PXYLP1Q8TE99 480 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms