RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 AMOTL1Q8IY63 956 aa20.14■□□□□ 0.81
RPL28-209ENST00000560055 DIAPH3Q9NSV4 1193 aa20.14■□□□□ 0.81
RPL28-209ENST00000560055 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.14■□□□□ 0.81
RPL28-209ENST00000560055 SWAP70Q9UH65 585 aa20.14■□□□□ 0.81
RPL28-209ENST00000560055 KCNH4Q9UQ05 1017 aa20.14■□□□□ 0.81
RPL28-209ENST00000560055 ROBO3Q96MS0 1386 aa20.13■□□□□ 0.81
RPL28-209ENST00000560055 APPP05067 770 aa20.13■□□□□ 0.81
RPL28-209ENST00000560055 TDO2P48775 406 aa20.13■□□□□ 0.81
RPL28-209ENST00000560055 SREBF2Q12772 1141 aa20.13■□□□□ 0.81
RPL28-209ENST00000560055 SHROOM1Q2M3G4 852 aaPredicted RBP20.13■□□□□ 0.81
RPL28-209ENST00000560055 CWC27Q6UX04 472 aaKnown RBP20.13■□□□□ 0.81
RPL28-209ENST00000560055 C16orf86Q6ZW13 317 aa20.13■□□□□ 0.81
RPL28-209ENST00000560055 DYNLL2Q96FJ2 89 aa20.13■□□□□ 0.81
RPL28-209ENST00000560055 NACAP1Q9BZK3 213 aa20.13■□□□□ 0.81
RPL28-209ENST00000560055 GINM1Q9NU53 330 aa20.13■□□□□ 0.81
RPL28-209ENST00000560055 ASNSP08243 561 aa20.12■□□□□ 0.81
RPL28-209ENST00000560055 GTF2A2P52657 109 aa20.12■□□□□ 0.81
RPL28-209ENST00000560055 INHBEP58166 350 aa20.12■□□□□ 0.81
RPL28-209ENST00000560055 ALX1Q15699 326 aa20.12■□□□□ 0.81
RPL28-209ENST00000560055 BMP2KLQ5H9B9 411 aa20.12■□□□□ 0.81
RPL28-209ENST00000560055 SLC44A5Q8NCS7 719 aa20.12■□□□□ 0.81
RPL28-209ENST00000560055 ZBTB21Q9ULJ3 1066 aa20.12■□□□□ 0.81
RPL28-209ENST00000560055 AFG3L2Q9Y4W6 797 aa20.12■□□□□ 0.81
RPL28-209ENST00000560055 ZHX2Q9Y6X8 837 aa20.12■□□□□ 0.81
RPL28-209ENST00000560055 PHIPQ8WWQ0 1821 aa20.11■□□□□ 0.81
RPL28-209ENST00000560055 GDF11O95390 407 aa20.11■□□□□ 0.81
RPL28-209ENST00000560055 HSPD1P10809 573 aaKnown RBP20.11■□□□□ 0.81
RPL28-209ENST00000560055 CHMLP26374 656 aa20.11■□□□□ 0.81
RPL28-209ENST00000560055 CERKLQ49MI3 558 aaPredicted RBP20.11■□□□□ 0.81
RPL28-209ENST00000560055 BRI3BPQ8WY22 251 aa20.11■□□□□ 0.81
RPL28-209ENST00000560055 PTPN18Q99952 460 aa20.11■□□□□ 0.81
RPL28-209ENST00000560055 NAPBQ9H115 298 aa20.11■□□□□ 0.81
RPL28-209ENST00000560055 IL25Q9H293 177 aa20.11■□□□□ 0.81
RPL28-209ENST00000560055 ATAD5Q96QE3 1844 aa20.11■□□□□ 0.81
RPL28-209ENST00000560055 ZMYM6O95789 1325 aa20.1■□□□□ 0.81
RPL28-209ENST00000560055 CXCL11O14625 94 aa20.1■□□□□ 0.81
RPL28-209ENST00000560055 CA12O43570 354 aa20.1■□□□□ 0.81
RPL28-209ENST00000560055 CDK8P49336 464 aa20.1■□□□□ 0.81
RPL28-209ENST00000560055 MFAP1P55081 439 aaKnown RBP20.1■□□□□ 0.81
RPL28-209ENST00000560055 SNAPC2Q13487 334 aa20.1■□□□□ 0.81
RPL28-209ENST00000560055 CCDC84Q86UT8 332 aaPredicted RBP20.1■□□□□ 0.81
RPL28-209ENST00000560055 TBC1D2Q9BYX2 928 aa20.1■□□□□ 0.81
RPL28-209ENST00000560055 USP17L5A8MUK1 530 aa20.09■□□□□ 0.81
RPL28-209ENST00000560055 MINDY4BA8MYZ0 360 aa20.09■□□□□ 0.81
RPL28-209ENST00000560055 IGF2BP3O00425 579 aaKnown RBP eCLIP20.09■□□□□ 0.81
RPL28-209ENST00000560055 GH2P01242 217 aa20.09■□□□□ 0.81
RPL28-209ENST00000560055 MOGSQ13724 837 aa20.09■□□□□ 0.81
RPL28-209ENST00000560055 IFNL1Q8IU54 200 aa20.09■□□□□ 0.81
RPL28-209ENST00000560055 RNF186Q9NXI6 227 aa20.09■□□□□ 0.81
RPL28-209ENST00000560055 SAGE1Q9NXZ1 904 aa20.09■□□□□ 0.81
RPL28-209ENST00000560055 RAD50Q92878 1312 aa20.08■□□□□ 0.81
RPL28-209ENST00000560055 CCL15-CCL14A0A0B4J2E2 113 aa20.08■□□□□ 0.81
RPL28-209ENST00000560055 A0A0G2JLL6 359 aaPredicted RBP20.08■□□□□ 0.81
RPL28-209ENST00000560055 FGAP02671 866 aa20.08■□□□□ 0.81
RPL28-209ENST00000560055 CETPP11597 493 aa20.08■□□□□ 0.81
RPL28-209ENST00000560055 CCL15Q16663 113 aa20.08■□□□□ 0.81
RPL28-209ENST00000560055 ABCB5Q2M3G0 1257 aa20.08■□□□□ 0.81
RPL28-209ENST00000560055 PRRT2Q7Z6L0 340 aaPredicted RBP20.08■□□□□ 0.81
RPL28-209ENST00000560055 ZNF280CQ8ND82 737 aa20.08■□□□□ 0.81
RPL28-209ENST00000560055 ABHD8Q96I13 439 aa20.08■□□□□ 0.81
RPL28-209ENST00000560055 WDR18Q9BV38 432 aa20.08■□□□□ 0.81
RPL28-209ENST00000560055 GUCY1A2P33402 732 aa20.07■□□□□ 0.8
RPL28-209ENST00000560055 PPARAQ07869 468 aa20.07■□□□□ 0.8
RPL28-209ENST00000560055 PTPRFP10586 1907 aa20.06■□□□□ 0.8
RPL28-209ENST00000560055 TRPA1O75762 1119 aa20.06■□□□□ 0.8
RPL28-209ENST00000560055 SPP2Q13103 211 aa20.06■□□□□ 0.8
RPL28-209ENST00000560055 RUFY2Q8WXA3 655 aa20.06■□□□□ 0.8
RPL28-209ENST00000560055 CCDC17Q96LX7 622 aa20.06■□□□□ 0.8
RPL28-209ENST00000560055 CFHR5Q9BXR6 569 aa20.06■□□□□ 0.8
RPL28-209ENST00000560055 AS3MTQ9HBK9 375 aa20.06■□□□□ 0.8
RPL28-209ENST00000560055 ANAPC4Q9UJX5 808 aa20.06■□□□□ 0.8
RPL28-209ENST00000560055 TRIM75PA6NK02 468 aa20.05■□□□□ 0.8
RPL28-209ENST00000560055 BTBD19C9JJ37 291 aa20.05■□□□□ 0.8
RPL28-209ENST00000560055 SGSM2O43147 1006 aa20.05■□□□□ 0.8
RPL28-209ENST00000560055 ALDH1A1P00352 501 aa20.05■□□□□ 0.8
RPL28-209ENST00000560055 AKR1B1P15121 316 aa20.05■□□□□ 0.8
RPL28-209ENST00000560055 RASA1P20936 1047 aa20.05■□□□□ 0.8
RPL28-209ENST00000560055 FAM43AQ8N2R8 423 aa20.05■□□□□ 0.8
RPL28-209ENST00000560055 DSCC1Q9BVC3 393 aa20.05■□□□□ 0.8
RPL28-209ENST00000560055 ZCCHC17Q9NP64 241 aaKnown RBP20.05■□□□□ 0.8
RPL28-209ENST00000560055 CABP5Q9NP86 173 aa20.05■□□□□ 0.8
RPL28-209ENST00000560055 SEPT2Q15019 361 aa20.04■□□□□ 0.8
RPL28-209ENST00000560055 SH3D19Q5HYK7 790 aa20.04■□□□□ 0.8
RPL28-209ENST00000560055 TMEM179Q6ZVK1 233 aa20.04■□□□□ 0.8
RPL28-209ENST00000560055 BACE1P56817 501 aa20.03■□□□□ 0.8
RPL28-209ENST00000560055 RAB3GAP1Q15042 981 aa20.03■□□□□ 0.8
RPL28-209ENST00000560055 OTUD7BQ6GQQ9 843 aa20.03■□□□□ 0.8
RPL28-209ENST00000560055 GPAT2Q6NUI2 795 aa20.03■□□□□ 0.8
RPL28-209ENST00000560055 FASTKD5Q7L8L6 764 aaKnown RBP20.03■□□□□ 0.8
RPL28-209ENST00000560055 ANKRD23Q86SG2 305 aa20.03■□□□□ 0.8
RPL28-209ENST00000560055 STK11IPQ8N1F8 1099 aa20.03■□□□□ 0.8
RPL28-209ENST00000560055 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.03■□□□□ 0.8
RPL28-209ENST00000560055 MKNK2Q9HBH9 465 aa20.03■□□□□ 0.8
RPL28-209ENST00000560055 ZNF287Q9HBT7 754 aa20.03■□□□□ 0.8
RPL28-209ENST00000560055 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.03■□□□□ 0.8
RPL28-209ENST00000560055 TACC3Q9Y6A5 838 aa20.03■□□□□ 0.8
RPL28-209ENST00000560055 MYH8P13535 1937 aa20.03■□□□□ 0.8
RPL28-209ENST00000560055 MPHOSPH10O00566 681 aaKnown RBP20.02■□□□□ 0.8
RPL28-209ENST00000560055 SLC3A2P08195 630 aaKnown RBP20.02■□□□□ 0.8
RPL28-209ENST00000560055 FGRP09769 529 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms