RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.55□□□□□ -0.24
RORA-212ENST00000560004 MYH4Q9Y623 1939 aa13.54□□□□□ -0.24
RORA-212ENST00000560004 IGKV6D-41A0A0C4DH26 115 aa13.54□□□□□ -0.24
RORA-212ENST00000560004 PCP11498 1178 aaKnown RBP13.54□□□□□ -0.24
RORA-212ENST00000560004 GUCY1A2P33402 732 aa13.54□□□□□ -0.24
RORA-212ENST00000560004 PDE4BQ07343 736 aa13.54□□□□□ -0.24
RORA-212ENST00000560004 NOL9Q5SY16 702 aaKnown RBP13.54□□□□□ -0.24
RORA-212ENST00000560004 RNF20Q5VTR2 975 aa13.54□□□□□ -0.24
RORA-212ENST00000560004 MB21D2Q8IYB1 491 aaPredicted RBP13.54□□□□□ -0.24
RORA-212ENST00000560004 WRNIP1Q96S55 665 aa13.54□□□□□ -0.24
RORA-212ENST00000560004 KIF2CQ99661 725 aa13.54□□□□□ -0.24
RORA-212ENST00000560004 TRIM34Q9BYJ4 488 aa13.54□□□□□ -0.24
RORA-212ENST00000560004 C22orf23Q9BZE7 217 aa13.54□□□□□ -0.24
RORA-212ENST00000560004 RNF41Q9H4P4 317 aaPredicted RBP13.54□□□□□ -0.24
RORA-212ENST00000560004 B4E1Z4 1266 aa13.53□□□□□ -0.24
RORA-212ENST00000560004 SLC3A2P08195 630 aaKnown RBP13.53□□□□□ -0.24
RORA-212ENST00000560004 MCCP23508 829 aa13.53□□□□□ -0.24
RORA-212ENST00000560004 NF2P35240 595 aa13.53□□□□□ -0.24
RORA-212ENST00000560004 ANTXR2P58335 489 aa13.53□□□□□ -0.24
RORA-212ENST00000560004 VGLL4Q14135 290 aa13.53□□□□□ -0.24
RORA-212ENST00000560004 CERKLQ49MI3 558 aaPredicted RBP13.53□□□□□ -0.24
RORA-212ENST00000560004 FAM47AQ5JRC9 791 aa13.53□□□□□ -0.24
RORA-212ENST00000560004 MFSD6Q6ZSS7 791 aa13.53□□□□□ -0.24
RORA-212ENST00000560004 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.53□□□□□ -0.24
RORA-212ENST00000560004 CYB5R4Q7L1T6 521 aa13.53□□□□□ -0.24
RORA-212ENST00000560004 GBA2Q9HCG7 927 aaPredicted RBP13.53□□□□□ -0.24
RORA-212ENST00000560004 ZBTB21Q9ULJ3 1066 aa13.53□□□□□ -0.24
RORA-212ENST00000560004 ANGEL1Q9UNK9 670 aaKnown RBP13.53□□□□□ -0.24
RORA-212ENST00000560004 SNCAIPQ9Y6H5 919 aa13.53□□□□□ -0.24
RORA-212ENST00000560004 LOC285556D6RIA3 1793 aa13.53□□□□□ -0.24
RORA-212ENST00000560004 GH2P01242 217 aa13.52□□□□□ -0.25
RORA-212ENST00000560004 CAP2P40123 477 aa13.52□□□□□ -0.25
RORA-212ENST00000560004 ANAPC15P60006 121 aa13.52□□□□□ -0.25
RORA-212ENST00000560004 FKBP1BP68106 108 aa13.52□□□□□ -0.25
RORA-212ENST00000560004 RRP12Q5JTH9 1297 aaKnown RBP13.52□□□□□ -0.25
RORA-212ENST00000560004 LDLRAD1Q5T700 205 aa13.52□□□□□ -0.25
RORA-212ENST00000560004 CLEC10AQ8IUN9 316 aa13.52□□□□□ -0.25
RORA-212ENST00000560004 ZKSCAN4Q969J2 545 aaPredicted RBP13.52□□□□□ -0.25
RORA-212ENST00000560004 CNNM2Q9H8M5 875 aa13.52□□□□□ -0.25
RORA-212ENST00000560004 MKNK2Q9HBH9 465 aa13.52□□□□□ -0.25
RORA-212ENST00000560004 PPP1R12BO60237 982 aaPredicted RBP13.51□□□□□ -0.25
RORA-212ENST00000560004 CTNND1O60716 968 aaKnown RBP13.51□□□□□ -0.25
RORA-212ENST00000560004 KDM4AO75164 1064 aa13.51□□□□□ -0.25
RORA-212ENST00000560004 CPA1P15085 419 aa13.51□□□□□ -0.25
RORA-212ENST00000560004 ZKSCAN1P17029 563 aaPredicted RBP13.51□□□□□ -0.25
RORA-212ENST00000560004 IREB2P48200 963 aaKnown RBP13.51□□□□□ -0.25
RORA-212ENST00000560004 KRT32Q14532 448 aa13.51□□□□□ -0.25
RORA-212ENST00000560004 ABCB5Q2M3G0 1257 aa13.51□□□□□ -0.25
RORA-212ENST00000560004 CCDC84Q86UT8 332 aaPredicted RBP13.51□□□□□ -0.25
RORA-212ENST00000560004 SCYL3Q8IZE3 742 aa13.51□□□□□ -0.25
RORA-212ENST00000560004 NEDD1Q8NHV4 660 aa13.51□□□□□ -0.25
RORA-212ENST00000560004 NCOA7Q8NI08 942 aa13.51□□□□□ -0.25
RORA-212ENST00000560004 ESR2Q92731 530 aa13.51□□□□□ -0.25
RORA-212ENST00000560004 CLMNQ96JQ2 1002 aa13.51□□□□□ -0.25
RORA-212ENST00000560004 CCDC17Q96LX7 622 aa13.51□□□□□ -0.25
RORA-212ENST00000560004 JAKMIP1Q96N16 626 aaKnown RBP13.51□□□□□ -0.25
RORA-212ENST00000560004 KRT23Q9C075 422 aa13.51□□□□□ -0.25
RORA-212ENST00000560004 ZNF287Q9HBT7 754 aa13.51□□□□□ -0.25
RORA-212ENST00000560004 IL17RBQ9NRM6 502 aa13.51□□□□□ -0.25
RORA-212ENST00000560004 TSPY2A6NKD2 308 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 UBE2Q2LH0YL09 131 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 RANBP6O60518 1105 aaKnown RBP13.5□□□□□ -0.25
RORA-212ENST00000560004 NMT2O60551 498 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 NOVP48745 357 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 NT5C2P49902 561 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 MAP3K9P80192 1104 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 TFAP4Q01664 338 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 SEPT2Q15019 361 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 TMEM179Q6ZVK1 233 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 ARMC9Q7Z3E5 817 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 RALYLQ86SE5 291 aaKnown RBP13.5□□□□□ -0.25
RORA-212ENST00000560004 ANKRD13AQ8IZ07 590 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 NEK1Q96PY6 1258 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 TOMM22Q9NS69 142 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 ZSWIM5Q9P217 1185 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 THSD7BQ9C0I4 1608 aa13.5□□□□□ -0.25
RORA-212ENST00000560004 TSPY3P0CV98 308 aa13.49□□□□□ -0.25
RORA-212ENST00000560004 TSPY8P0CW00 308 aa13.49□□□□□ -0.25
RORA-212ENST00000560004 PTPRAP18433 802 aa13.49□□□□□ -0.25
RORA-212ENST00000560004 CASTP20810 708 aaKnown RBP13.49□□□□□ -0.25
RORA-212ENST00000560004 EXOSC10Q01780 885 aaKnown RBP13.49□□□□□ -0.25
RORA-212ENST00000560004 TTLL12Q14166 644 aaPredicted RBP13.49□□□□□ -0.25
RORA-212ENST00000560004 CHST3Q7LGC8 479 aa13.49□□□□□ -0.25
RORA-212ENST00000560004 SAPCD2Q86UD0 394 aa13.49□□□□□ -0.25
RORA-212ENST00000560004 ZNF444Q8N0Y2 327 aaPredicted RBP13.49□□□□□ -0.25
RORA-212ENST00000560004 C2orf69Q8N8R5 385 aa13.49□□□□□ -0.25
RORA-212ENST00000560004 CEP95Q96GE4 821 aa13.49□□□□□ -0.25
RORA-212ENST00000560004 TCEANC2Q96MN5 208 aa13.49□□□□□ -0.25
RORA-212ENST00000560004 UPF3BQ9BZI7 483 aaKnown RBP13.49□□□□□ -0.25
RORA-212ENST00000560004 TM6SF1Q9BZW5 370 aa13.49□□□□□ -0.25
RORA-212ENST00000560004 UPF2Q9HAU5 1272 aaKnown RBP13.49□□□□□ -0.25
RORA-212ENST00000560004 ZSWIM6Q9HCJ5 1215 aa13.49□□□□□ -0.25
RORA-212ENST00000560004 GINM1Q9NU53 330 aa13.49□□□□□ -0.25
RORA-212ENST00000560004 TLL2Q9Y6L7 1015 aa13.49□□□□□ -0.25
RORA-212ENST00000560004 TNKSO95271 1327 aa13.48□□□□□ -0.25
RORA-212ENST00000560004 WDR19Q8NEZ3 1342 aa13.48□□□□□ -0.25
RORA-212ENST00000560004 UNCXA6NJT0 531 aa13.48□□□□□ -0.25
RORA-212ENST00000560004 TMEM88BA6NKF7 163 aa13.48□□□□□ -0.25
RORA-212ENST00000560004 MPHOSPH10O00566 681 aaKnown RBP13.48□□□□□ -0.25
RORA-212ENST00000560004 PRC1O43663 620 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms