RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 CYP2D6P10635 497 aa16.37■□□□□ 0.21
CHRNB4-204ENST00000559849 CTR9Q6PD62 1173 aa16.37■□□□□ 0.21
CHRNB4-204ENST00000559849 CCDC136Q96JN2 1154 aa16.37■□□□□ 0.21
CHRNB4-204ENST00000559849 NACAP1Q9BZK3 213 aa16.37■□□□□ 0.21
CHRNB4-204ENST00000559849 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.37■□□□□ 0.21
CHRNB4-204ENST00000559849 SWAP70Q9UH65 585 aa16.37■□□□□ 0.21
CHRNB4-204ENST00000559849 GDF11O95390 407 aa16.36■□□□□ 0.21
CHRNB4-204ENST00000559849 SHMT1P34896 483 aa16.36■□□□□ 0.21
CHRNB4-204ENST00000559849 MCMDC2Q4G0Z9 681 aa16.36■□□□□ 0.21
CHRNB4-204ENST00000559849 SBK1Q52WX2 424 aa16.36■□□□□ 0.21
CHRNB4-204ENST00000559849 ZNF280CQ8ND82 737 aa16.36■□□□□ 0.21
CHRNB4-204ENST00000559849 AS3MTQ9HBK9 375 aa16.36■□□□□ 0.21
CHRNB4-204ENST00000559849 PHIPQ8WWQ0 1821 aa16.36■□□□□ 0.21
CHRNB4-204ENST00000559849 SDSP20132 328 aa16.36■□□□□ 0.21
CHRNB4-204ENST00000559849 EVX2Q03828 476 aa16.36■□□□□ 0.21
CHRNB4-204ENST00000559849 TTC22Q5TAA0 569 aa16.36■□□□□ 0.21
CHRNB4-204ENST00000559849 FASTKD5Q7L8L6 764 aaKnown RBP16.36■□□□□ 0.21
CHRNB4-204ENST00000559849 IFNL3Q8IZI9 196 aa16.36■□□□□ 0.21
CHRNB4-204ENST00000559849 ZBTB21Q9ULJ3 1066 aa16.36■□□□□ 0.21
CHRNB4-204ENST00000559849 CASP8AP2Q9UKL3 1982 aa16.35■□□□□ 0.21
CHRNB4-204ENST00000559849 CYP2D7A0A087X1C5 515 aa16.35■□□□□ 0.21
CHRNB4-204ENST00000559849 TRIM75PA6NK02 468 aa16.35■□□□□ 0.21
CHRNB4-204ENST00000559849 TDO2P48775 406 aa16.35■□□□□ 0.21
CHRNB4-204ENST00000559849 JAG1P78504 1218 aa16.35■□□□□ 0.21
CHRNB4-204ENST00000559849 SPP2Q13103 211 aa16.35■□□□□ 0.21
CHRNB4-204ENST00000559849 CCDC84Q86UT8 332 aaPredicted RBP16.35■□□□□ 0.21
CHRNB4-204ENST00000559849 FAM43AQ8N2R8 423 aa16.35■□□□□ 0.21
CHRNB4-204ENST00000559849 FAM227BQ96M60 508 aa16.35■□□□□ 0.21
CHRNB4-204ENST00000559849 ZCCHC17Q9NP64 241 aaKnown RBP16.35■□□□□ 0.21
CHRNB4-204ENST00000559849 CABP5Q9NP86 173 aa16.35■□□□□ 0.21
CHRNB4-204ENST00000559849 A0A0G2JLL6 359 aaPredicted RBP16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 BTBD19C9JJ37 291 aa16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 HIP1O00291 1037 aa16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 GH2P01242 217 aa16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 ABCB5Q2M3G0 1257 aa16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 PRRT2Q7Z6L0 340 aaPredicted RBP16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 DYNLL2Q96FJ2 89 aa16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 WDR18Q9BV38 432 aa16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 EPB41L4AQ9HCS5 686 aaPredicted RBP16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 A0A0D9SFI3 127 aa16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 MINDY4BA8MYZ0 360 aa16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 NMIQ13287 307 aaPredicted RBP16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 NOM1Q5C9Z4 860 aaKnown RBP16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 COL13A1Q5TAT6 717 aaPredicted RBP16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 CCDC129Q6ZRS4 1044 aa16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 ANKRD23Q86SG2 305 aa16.34■□□□□ 0.21
CHRNB4-204ENST00000559849 CDK8P49336 464 aa16.33■□□□□ 0.21
CHRNB4-204ENST00000559849 MOGSQ13724 837 aa16.33■□□□□ 0.21
CHRNB4-204ENST00000559849 TAF1CQ15572 869 aaPredicted RBP16.33■□□□□ 0.21
CHRNB4-204ENST00000559849 SHROOM1Q2M3G4 852 aaPredicted RBP16.33■□□□□ 0.21
CHRNB4-204ENST00000559849 C16orf86Q6ZW13 317 aa16.33■□□□□ 0.21
CHRNB4-204ENST00000559849 SLC44A5Q8NCS7 719 aa16.33■□□□□ 0.21
CHRNB4-204ENST00000559849 DIAPH3Q9NSV4 1193 aa16.33■□□□□ 0.21
CHRNB4-204ENST00000559849 PTPRFP10586 1907 aa16.33■□□□□ 0.21
CHRNB4-204ENST00000559849 MYH8P13535 1937 aa16.33■□□□□ 0.2
CHRNB4-204ENST00000559849 GSPT1P15170 499 aaKnown RBP16.33■□□□□ 0.2
CHRNB4-204ENST00000559849 MFAP1P55081 439 aaKnown RBP16.33■□□□□ 0.2
CHRNB4-204ENST00000559849 CRHR2Q13324 411 aa16.33■□□□□ 0.2
CHRNB4-204ENST00000559849 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.2
CHRNB4-204ENST00000559849 CCDC17Q96LX7 622 aa16.33■□□□□ 0.2
CHRNB4-204ENST00000559849 NAPBQ9H115 298 aa16.33■□□□□ 0.2
CHRNB4-204ENST00000559849 R3HDMLQ9H3Y0 253 aa16.33■□□□□ 0.2
CHRNB4-204ENST00000559849 ZFYVE28Q9HCC9 887 aa16.33■□□□□ 0.2
CHRNB4-204ENST00000559849 SMIM22K7EJ46 135 aa16.32■□□□□ 0.2
CHRNB4-204ENST00000559849 GPR25O00155 361 aa16.32■□□□□ 0.2
CHRNB4-204ENST00000559849 BACE1P56817 501 aa16.32■□□□□ 0.2
CHRNB4-204ENST00000559849 RAB3GAP1Q15042 981 aa16.32■□□□□ 0.2
CHRNB4-204ENST00000559849 C19orf81C9J6K1 198 aa16.31■□□□□ 0.2
CHRNB4-204ENST00000559849 USP17L10C9JJH3 530 aa16.31■□□□□ 0.2
CHRNB4-204ENST00000559849 PDHXO00330 501 aa16.31■□□□□ 0.2
CHRNB4-204ENST00000559849 MPHOSPH10O00566 681 aaKnown RBP16.31■□□□□ 0.2
CHRNB4-204ENST00000559849 SH3D19Q5HYK7 790 aa16.31■□□□□ 0.2
CHRNB4-204ENST00000559849 CWC27Q6UX04 472 aaKnown RBP16.31■□□□□ 0.2
CHRNB4-204ENST00000559849 GADL1Q6ZQY3 521 aa16.31■□□□□ 0.2
CHRNB4-204ENST00000559849 PROCA1Q8NCQ7 364 aaPredicted RBP16.31■□□□□ 0.2
CHRNB4-204ENST00000559849 VPS53Q5VIR6 699 aa16.31■□□□□ 0.2
CHRNB4-204ENST00000559849 GPAT2Q6NUI2 795 aa16.31■□□□□ 0.2
CHRNB4-204ENST00000559849 ZNF296Q8WUU4 475 aaPredicted RBP16.31■□□□□ 0.2
CHRNB4-204ENST00000559849 ZNF287Q9HBT7 754 aa16.31■□□□□ 0.2
CHRNB4-204ENST00000559849 HMGCS2P54868 508 aa16.3■□□□□ 0.2
CHRNB4-204ENST00000559849 TMEM179Q6ZVK1 233 aa16.3■□□□□ 0.2
CHRNB4-204ENST00000559849 ZNF589Q86UQ0 364 aaPredicted RBP16.3■□□□□ 0.2
CHRNB4-204ENST00000559849 MKNK2Q9HBH9 465 aa16.3■□□□□ 0.2
CHRNB4-204ENST00000559849 SLC45A1Q9Y2W3 748 aa16.3■□□□□ 0.2
CHRNB4-204ENST00000559849 CCDC171Q6TFL3 1326 aa16.3■□□□□ 0.2
CHRNB4-204ENST00000559849 FOXP2O15409 715 aa16.3■□□□□ 0.2
CHRNB4-204ENST00000559849 TLR2O60603 784 aa16.3■□□□□ 0.2
CHRNB4-204ENST00000559849 HSPD1P10809 573 aaKnown RBP16.3■□□□□ 0.2
CHRNB4-204ENST00000559849 MTMR2Q13614 643 aa16.3■□□□□ 0.2
CHRNB4-204ENST00000559849 ALX1Q15699 326 aa16.3■□□□□ 0.2
CHRNB4-204ENST00000559849 ROBO3Q96MS0 1386 aa16.3■□□□□ 0.2
CHRNB4-204ENST00000559849 FKTNO75072 461 aa16.29■□□□□ 0.2
CHRNB4-204ENST00000559849 SLC3A2P08195 630 aaKnown RBP16.29■□□□□ 0.2
CHRNB4-204ENST00000559849 GUCY1A2P33402 732 aa16.29■□□□□ 0.2
CHRNB4-204ENST00000559849 SEPT2Q15019 361 aa16.29■□□□□ 0.2
CHRNB4-204ENST00000559849 TMOD4Q9NZQ9 345 aa16.29■□□□□ 0.2
CHRNB4-204ENST00000559849 AGTPBP1Q9UPW5 1226 aa16.29■□□□□ 0.2
CHRNB4-204ENST00000559849 FGAP02671 866 aa16.28■□□□□ 0.2
CHRNB4-204ENST00000559849 PPARAQ07869 468 aa16.28■□□□□ 0.2
CHRNB4-204ENST00000559849 STK11IPQ8N1F8 1099 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms