RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 PRDM5Q9NQX1 630 aaPredicted RBP13.34□□□□□ -0.27
TRAF3-207ENST00000559734 COL2A1P02458 1487 aaPredicted RBP13.34□□□□□ -0.27
TRAF3-207ENST00000559734 A0A1B0GUL7 405 aa13.33□□□□□ -0.28
TRAF3-207ENST00000559734 GDF11O95390 407 aa13.33□□□□□ -0.28
TRAF3-207ENST00000559734 LDHCP07864 332 aa13.33□□□□□ -0.28
TRAF3-207ENST00000559734 MVPQ14764 893 aaKnown RBP13.33□□□□□ -0.28
TRAF3-207ENST00000559734 SHROOM1Q2M3G4 852 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-207ENST00000559734 Q3C1V9 767 aa13.33□□□□□ -0.28
TRAF3-207ENST00000559734 MORN1Q5T089 497 aa13.33□□□□□ -0.28
TRAF3-207ENST00000559734 MFSD14CQ5VZR4 134 aa13.33□□□□□ -0.28
TRAF3-207ENST00000559734 TBC1D9Q6ZT07 1266 aa13.33□□□□□ -0.28
TRAF3-207ENST00000559734 CRACR2BQ8N4Y2 399 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-207ENST00000559734 ZNF384Q8TF68 577 aa13.33□□□□□ -0.28
TRAF3-207ENST00000559734 MYLIPQ8WY64 445 aa13.33□□□□□ -0.28
TRAF3-207ENST00000559734 XAGE2Q96GT9 111 aa13.33□□□□□ -0.28
TRAF3-207ENST00000559734 NOL10Q9BSC4 688 aaKnown RBP13.33□□□□□ -0.28
TRAF3-207ENST00000559734 WDR18Q9BV38 432 aa13.33□□□□□ -0.28
TRAF3-207ENST00000559734 PRDM6Q9NQX0 595 aa13.33□□□□□ -0.28
TRAF3-207ENST00000559734 RBPJLQ9UBG7 517 aa13.33□□□□□ -0.28
TRAF3-207ENST00000559734 HERC5Q9UII4 1024 aaKnown RBP13.33□□□□□ -0.28
TRAF3-207ENST00000559734 ATP11BQ9Y2G3 1177 aa13.33□□□□□ -0.28
TRAF3-207ENST00000559734 PDS5AQ29RF7 1337 aaKnown RBP13.33□□□□□ -0.28
TRAF3-207ENST00000559734 MYCNP04198 464 aaPredicted RBP13.32□□□□□ -0.28
TRAF3-207ENST00000559734 ASNSP08243 561 aa13.32□□□□□ -0.28
TRAF3-207ENST00000559734 HOXA7P31268 230 aaPredicted RBP13.32□□□□□ -0.28
TRAF3-207ENST00000559734 RTP1P59025 263 aa13.32□□□□□ -0.28
TRAF3-207ENST00000559734 GORABQ5T7V8 394 aa13.32□□□□□ -0.28
TRAF3-207ENST00000559734 PI16Q6UXB8 463 aa13.32□□□□□ -0.28
TRAF3-207ENST00000559734 FAM9BQ8IZU0 186 aa13.32□□□□□ -0.28
TRAF3-207ENST00000559734 SH3RF3Q8TEJ3 882 aaPredicted RBP13.32□□□□□ -0.28
TRAF3-207ENST00000559734 USP6NLQ92738 828 aa13.32□□□□□ -0.28
TRAF3-207ENST00000559734 NEUROD6Q96NK8 337 aa13.32□□□□□ -0.28
TRAF3-207ENST00000559734 PI4KBQ9UBF8 816 aa13.32□□□□□ -0.28
TRAF3-207ENST00000559734 DDX20Q9UHI6 824 aaKnown RBP13.32□□□□□ -0.28
TRAF3-207ENST00000559734 UNC80Q8N2C7 3258 aa13.31□□□□□ -0.28
TRAF3-207ENST00000559734 MAST2Q6P0Q8 1798 aa13.31□□□□□ -0.28
TRAF3-207ENST00000559734 C19orf81C9J6K1 198 aa13.31□□□□□ -0.28
TRAF3-207ENST00000559734 USP17L10C9JJH3 530 aa13.31□□□□□ -0.28
TRAF3-207ENST00000559734 FOSL2P15408 326 aa13.31□□□□□ -0.28
TRAF3-207ENST00000559734 JAG1P78504 1218 aa13.31□□□□□ -0.28
TRAF3-207ENST00000559734 TFCP2Q12800 502 aa13.31□□□□□ -0.28
TRAF3-207ENST00000559734 MAP2K5Q13163 448 aa13.31□□□□□ -0.28
TRAF3-207ENST00000559734 SHHQ15465 462 aa13.31□□□□□ -0.28
TRAF3-207ENST00000559734 ZYXQ15942 572 aaKnown RBP13.31□□□□□ -0.28
TRAF3-207ENST00000559734 NSUN4Q96CB9 384 aaKnown RBP13.31□□□□□ -0.28
TRAF3-207ENST00000559734 EDC3Q96F86 508 aaKnown RBP13.31□□□□□ -0.28
TRAF3-207ENST00000559734 SEMA6BQ9H3T3 888 aa13.31□□□□□ -0.28
TRAF3-207ENST00000559734 FLRT1Q9NZU1 646 aa13.31□□□□□ -0.28
TRAF3-207ENST00000559734 HMG20BQ9P0W2 317 aa13.31□□□□□ -0.28
TRAF3-207ENST00000559734 DNM1LO00429 736 aa13.3□□□□□ -0.28
TRAF3-207ENST00000559734 GLRX3O76003 335 aaKnown RBP13.3□□□□□ -0.28
TRAF3-207ENST00000559734 MAP4K4O95819 1239 aaPredicted RBP13.3□□□□□ -0.28
TRAF3-207ENST00000559734 C9orf50Q5SZB4 431 aa13.3□□□□□ -0.28
TRAF3-207ENST00000559734 MAPKAPK5Q8IW41 473 aa13.3□□□□□ -0.28
TRAF3-207ENST00000559734 SPATA5Q8NB90 893 aa13.3□□□□□ -0.28
TRAF3-207ENST00000559734 GTF3C2Q8WUA4 911 aaPredicted RBP13.3□□□□□ -0.28
TRAF3-207ENST00000559734 FEZ1Q99689 392 aa13.3□□□□□ -0.28
TRAF3-207ENST00000559734 COPRSQ9NQ92 184 aa13.3□□□□□ -0.28
TRAF3-207ENST00000559734 SMC4Q9NTJ3 1288 aa13.3□□□□□ -0.28
TRAF3-207ENST00000559734 AATFQ9NY61 560 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAF3-207ENST00000559734 LRP2BPQ9P2M1 347 aa13.3□□□□□ -0.28
TRAF3-207ENST00000559734 ZBTB21Q9ULJ3 1066 aa13.3□□□□□ -0.28
TRAF3-207ENST00000559734 AKAP2Q9Y2D5 859 aa13.3□□□□□ -0.28
TRAF3-207ENST00000559734 CYP2C19P33261 490 aa13.29□□□□□ -0.28
TRAF3-207ENST00000559734 CCNA1P78396 465 aa13.29□□□□□ -0.28
TRAF3-207ENST00000559734 ATP2B2Q01814 1243 aa13.29□□□□□ -0.28
TRAF3-207ENST00000559734 GJC2Q5T442 439 aaPredicted RBP13.29□□□□□ -0.28
TRAF3-207ENST00000559734 ANO1Q5XXA6 986 aa13.29□□□□□ -0.28
TRAF3-207ENST00000559734 USP17L2Q6R6M4 530 aa13.29□□□□□ -0.28
TRAF3-207ENST00000559734 TGFBRAP1Q8WUH2 860 aa13.29□□□□□ -0.28
TRAF3-207ENST00000559734 LPAR1Q92633 364 aa13.29□□□□□ -0.28
TRAF3-207ENST00000559734 BADQ92934 168 aa13.29□□□□□ -0.28
TRAF3-207ENST00000559734 DHX36Q9H2U1 1008 aaKnown RBP13.29□□□□□ -0.28
TRAF3-207ENST00000559734 DNAJC18Q9H819 358 aa13.29□□□□□ -0.28
TRAF3-207ENST00000559734 EMILIN3Q9NT22 766 aa13.29□□□□□ -0.28
TRAF3-207ENST00000559734 SAP30BPQ9UHR5 308 aaKnown RBP13.29□□□□□ -0.28
TRAF3-207ENST00000559734 IVNS1ABPQ9Y6Y0 642 aa13.29□□□□□ -0.28
TRAF3-207ENST00000559734 FRMPD3Q5JV73 1810 aa13.29□□□□□ -0.28
TRAF3-207ENST00000559734 ANP32CO43423 234 aa13.28□□□□□ -0.28
TRAF3-207ENST00000559734 MSCO60682 206 aa13.28□□□□□ -0.28
TRAF3-207ENST00000559734 SYMPKQ92797 1274 aaKnown RBP13.28□□□□□ -0.28
TRAF3-207ENST00000559734 TTYH1Q9H313 450 aaPredicted RBP13.28□□□□□ -0.28
TRAF3-207ENST00000559734 PALD1Q9ULE6 856 aa13.28□□□□□ -0.28
TRAF3-207ENST00000559734 KBTBD13C9JR72 458 aa13.27□□□□□ -0.29
TRAF3-207ENST00000559734 CNMDO75829 334 aa13.27□□□□□ -0.29
TRAF3-207ENST00000559734 BAG3O95817 575 aa13.27□□□□□ -0.29
TRAF3-207ENST00000559734 PTPREP23469 700 aa13.27□□□□□ -0.29
TRAF3-207ENST00000559734 TRIM60Q495X7 471 aa13.27□□□□□ -0.29
TRAF3-207ENST00000559734 NAA16Q6N069 864 aaPredicted RBP13.27□□□□□ -0.29
TRAF3-207ENST00000559734 POTEEQ6S8J3 1075 aa13.27□□□□□ -0.29
TRAF3-207ENST00000559734 NPLOC4Q8TAT6 608 aa13.27□□□□□ -0.29
TRAF3-207ENST00000559734 MEIS3Q99687 375 aa13.27□□□□□ -0.29
TRAF3-207ENST00000559734 HDAC5Q9UQL6 1122 aa13.27□□□□□ -0.29
TRAF3-207ENST00000559734 RABGAP1Q9Y3P9 1069 aa13.27□□□□□ -0.29
TRAF3-207ENST00000559734 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.27□□□□□ -0.29
TRAF3-207ENST00000559734 FLT1P17948 1338 aa13.27□□□□□ -0.29
TRAF3-207ENST00000559734 SIPA1L1O43166 1804 aa13.27□□□□□ -0.29
TRAF3-207ENST00000559734 LTBP2Q14767 1821 aa13.27□□□□□ -0.29
TRAF3-207ENST00000559734 SLC15A5A6NIM6 579 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 USP17L15C9J2P7 530 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms