RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 KIFC2Q96AC6 838 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 ZSCAN10Q96SZ4 725 aaPredicted RBP12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 B4DLN1 442 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 CCP110O43303 1012 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 LIG1P18858 919 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 CRKP46108 304 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 USH1GQ495M9 461 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 MTFR1LQ9H019 292 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 TRMT1Q9NXH9 659 aaKnown RBP12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 CALCOCO1Q9P1Z2 691 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 IVNS1ABPQ9Y6Y0 642 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 AKAP12Q02952 1782 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 CNKSR2Q8WXI2 1034 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 INTS4Q96HW7 963 aaKnown RBP12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 PLEKHG2Q9H7P9 1386 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 UBE2HP62256 183 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 SKIDA1Q1XH10 827 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 PPP4R3AQ6IN85 833 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 DYNLL2Q96FJ2 89 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 CCDC17Q96LX7 622 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 LSG1Q9H089 658 aaKnown RBP12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 SETD1AO15047 1707 aaKnown RBP12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 EPB41L2O43491 1005 aaKnown RBP12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 GDF11O95390 407 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 F13A1P00488 732 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 GOLGA8HP0CJ92 632 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 MCM7P33993 719 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 ADD1P35611 737 aaKnown RBP12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 ZNF445P59923 1031 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 VTI1AQ96AJ9 217 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 GOPCQ9HD26 462 aa12.13□□□□□ -0.47
CARMIL3-202ENST00000559694 BIN1O00499 593 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 ZBED4O75132 1171 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 BMP15O95972 392 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 LETM2Q2VYF4 491 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 ADCK5Q3MIX3 580 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 JAKMIP3Q5VZ66 844 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 CCDC70Q6NSX1 233 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 SPICE1Q8N0Z3 855 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 STRBPQ96SI9 672 aaKnown RBP12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 CNPY2Q9Y2B0 182 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 KIF1AQ12756 1690 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 CCDC174Q6PII3 467 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 TMCO3Q6UWJ1 677 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 CHURC1Q8WUH1 139 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 AS3MTQ9HBK9 375 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 PI4KBQ9UBF8 816 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 BIN2Q9UBW5 565 aaPredicted RBP12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 CFBP00751 764 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 PAGR1Q9BTK6 254 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 BEGAINQ9BUH8 593 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 LRRC4BQ9NT99 713 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 PKD2L1Q9P0L9 805 aa12.12□□□□□ -0.47
CARMIL3-202ENST00000559694 JAK2O60674 1132 aa12.11□□□□□ -0.47
CARMIL3-202ENST00000559694 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.11□□□□□ -0.47
CARMIL3-202ENST00000559694 PPP2R5BQ15173 497 aa12.11□□□□□ -0.47
CARMIL3-202ENST00000559694 ERMNQ8TAM6 284 aa12.11□□□□□ -0.47
CARMIL3-202ENST00000559694 PPP1R9BQ96SB3 815 aa12.11□□□□□ -0.47
CARMIL3-202ENST00000559694 DHX36Q9H2U1 1008 aaKnown RBP12.11□□□□□ -0.47
CARMIL3-202ENST00000559694 SLFN13Q68D06 897 aa12.11□□□□□ -0.47
CARMIL3-202ENST00000559694 ISM2Q6H9L7 571 aa12.11□□□□□ -0.47
CARMIL3-202ENST00000559694 DIS3L2Q8IYB7 885 aaKnown RBP12.11□□□□□ -0.47
CARMIL3-202ENST00000559694 FANCBQ8NB91 859 aa12.11□□□□□ -0.47
CARMIL3-202ENST00000559694 SH3RF3Q8TEJ3 882 aaPredicted RBP12.11□□□□□ -0.47
CARMIL3-202ENST00000559694 ZNRF3Q9ULT6 936 aa12.11□□□□□ -0.47
CARMIL3-202ENST00000559694 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
CARMIL3-202ENST00000559694 FRMPD2Q68DX3 1309 aaPredicted RBP12.11□□□□□ -0.47
CARMIL3-202ENST00000559694 KLRF2D3W0D1 207 aa12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 GADL1Q6ZQY3 521 aa12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 KCNG4Q8TDN1 519 aa12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 POLR3GO15318 223 aaPredicted RBP12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 FAM173BQ6P4H8 233 aa12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 KIF2AO00139 706 aaPredicted RBP12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 SPTLC2O15270 562 aa12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 ARID4AP29374 1257 aaPredicted RBP12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 GTF2F1P35269 517 aaKnown RBP eCLIP12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 NAP1L1P55209 391 aaKnown RBP12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 ZNF174Q15697 407 aa12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 ME3Q16798 604 aa12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 CCDC186Q7Z3E2 898 aa12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 MYO3BQ8WXR4 1341 aa12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 TOP1P11387 765 aaKnown RBP12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 SYKP43405 635 aa12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 AMPD3Q01432 767 aa12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 ZSWIM6Q9HCJ5 1215 aa12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 KCNJ14Q9UNX9 436 aa12.1□□□□□ -0.47
CARMIL3-202ENST00000559694 ZNF165P49910 485 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 PIK3AP1Q6ZUJ8 805 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 KRT222Q8N1A0 295 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 LZTS2Q9BRK4 669 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 LLPHQ9BRT6 129 aaKnown RBP12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 VPS54Q9P1Q0 977 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 TMEM232C9JQI7 657 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 FLOT1O75955 427 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 AFMP43652 599 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 STYK1Q6J9G0 422 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 TSC1Q92574 1164 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 TIGD1Q96MW7 591 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 ZBTB21Q9ULJ3 1066 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 PCP11498 1178 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms