RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 SERPINB13Q9UIV8 391 aa20.37■□□□□ 0.85
CHRNA3-206ENST00000559658 ATRNL1Q5VV63 1379 aa20.36■□□□□ 0.85
CHRNA3-206ENST00000559658 CTDNEP1O95476 244 aa20.36■□□□□ 0.85
CHRNA3-206ENST00000559658 EPS15P42566 896 aa20.36■□□□□ 0.85
CHRNA3-206ENST00000559658 APOA5Q6Q788 366 aa20.36■□□□□ 0.85
CHRNA3-206ENST00000559658 TTC6Q86TZ1 520 aa20.36■□□□□ 0.85
CHRNA3-206ENST00000559658 MICU3Q86XE3 530 aa20.36■□□□□ 0.85
CHRNA3-206ENST00000559658 INTS4Q96HW7 963 aaKnown RBP20.36■□□□□ 0.85
CHRNA3-206ENST00000559658 TMEM39BQ9GZU3 492 aa20.36■□□□□ 0.85
CHRNA3-206ENST00000559658 GREB1LQ9C091 1923 aaPredicted RBP20.36■□□□□ 0.85
CHRNA3-206ENST00000559658 WTAPQ15007 396 aa20.35■□□□□ 0.85
CHRNA3-206ENST00000559658 KIF4BQ2VIQ3 1234 aa20.35■□□□□ 0.85
CHRNA3-206ENST00000559658 RCSD1Q6JBY9 416 aa20.35■□□□□ 0.85
CHRNA3-206ENST00000559658 SGMS1Q86VZ5 419 aa20.35■□□□□ 0.85
CHRNA3-206ENST00000559658 CLEC10AQ8IUN9 316 aa20.35■□□□□ 0.85
CHRNA3-206ENST00000559658 GPRC5DQ9NZD1 345 aa20.35■□□□□ 0.85
CHRNA3-206ENST00000559658 ENTPD3O75355 529 aa20.35■□□□□ 0.85
CHRNA3-206ENST00000559658 NPM3O75607 178 aaKnown RBP20.35■□□□□ 0.85
CHRNA3-206ENST00000559658 NFXL1Q6ZNB6 911 aa20.35■□□□□ 0.85
CHRNA3-206ENST00000559658 ZNF274Q96GC6 653 aaPredicted RBP20.35■□□□□ 0.85
CHRNA3-206ENST00000559658 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.35■□□□□ 0.85
CHRNA3-206ENST00000559658 TMOD2Q9NZR1 351 aa20.35■□□□□ 0.85
CHRNA3-206ENST00000559658 HLA-DOAP06340 250 aa20.34■□□□□ 0.85
CHRNA3-206ENST00000559658 AKR1B1P15121 316 aa20.34■□□□□ 0.85
CHRNA3-206ENST00000559658 LIFRP42702 1097 aa20.34■□□□□ 0.85
CHRNA3-206ENST00000559658 COL2A1P02458 1487 aaPredicted RBP20.34■□□□□ 0.85
CHRNA3-206ENST00000559658 TSPY3P0CV98 308 aa20.33■□□□□ 0.85
CHRNA3-206ENST00000559658 TSPY8P0CW00 308 aa20.33■□□□□ 0.85
CHRNA3-206ENST00000559658 RASGRP2Q7LDG7 609 aa20.33■□□□□ 0.85
CHRNA3-206ENST00000559658 CSRNP1Q96S65 589 aa20.33■□□□□ 0.85
CHRNA3-206ENST00000559658 GJB2P29033 226 aa20.33■□□□□ 0.84
CHRNA3-206ENST00000559658 CDC27P30260 824 aa20.33■□□□□ 0.84
CHRNA3-206ENST00000559658 SART3Q15020 963 aaKnown RBP20.33■□□□□ 0.84
CHRNA3-206ENST00000559658 IQCA1Q86XH1 822 aa20.33■□□□□ 0.84
CHRNA3-206ENST00000559658 EHD4Q9H223 541 aa20.33■□□□□ 0.84
CHRNA3-206ENST00000559658 HIRAP54198 1017 aaPredicted RBP20.32■□□□□ 0.84
CHRNA3-206ENST00000559658 RRP1BQ14684 758 aaKnown RBP20.32■□□□□ 0.84
CHRNA3-206ENST00000559658 ZNF444Q8N0Y2 327 aaPredicted RBP20.32■□□□□ 0.84
CHRNA3-206ENST00000559658 NSUN7Q8NE18 718 aaKnown RBP20.32■□□□□ 0.84
CHRNA3-206ENST00000559658 DHX36Q9H2U1 1008 aaKnown RBP20.32■□□□□ 0.84
CHRNA3-206ENST00000559658 FAM217BQ9NTX9 383 aaPredicted RBP20.32■□□□□ 0.84
CHRNA3-206ENST00000559658 PGAP2Q9UHJ9 254 aa20.32■□□□□ 0.84
CHRNA3-206ENST00000559658 HACL1Q9UJ83 578 aa20.32■□□□□ 0.84
CHRNA3-206ENST00000559658 ERICH2A1L162 156 aa20.31■□□□□ 0.84
CHRNA3-206ENST00000559658 CCDC69A6NI79 296 aa20.31■□□□□ 0.84
CHRNA3-206ENST00000559658 MYO1BO43795 1136 aa20.31■□□□□ 0.84
CHRNA3-206ENST00000559658 IFIT1BQ5T764 474 aaKnown RBP20.31■□□□□ 0.84
CHRNA3-206ENST00000559658 ZNF654Q8IZM8 581 aa20.31■□□□□ 0.84
CHRNA3-206ENST00000559658 CRACR2BQ8N4Y2 399 aaPredicted RBP20.31■□□□□ 0.84
CHRNA3-206ENST00000559658 FAM151AQ8WW52 585 aa20.31■□□□□ 0.84
CHRNA3-206ENST00000559658 CHMP4CQ96CF2 233 aa20.31■□□□□ 0.84
CHRNA3-206ENST00000559658 DDX11Q96FC9 970 aa20.31■□□□□ 0.84
CHRNA3-206ENST00000559658 CHMP5Q9NZZ3 219 aa20.31■□□□□ 0.84
CHRNA3-206ENST00000559658 PI4KBQ9UBF8 816 aa20.31■□□□□ 0.84
CHRNA3-206ENST00000559658 SMC3Q9UQE7 1217 aa20.31■□□□□ 0.84
CHRNA3-206ENST00000559658 SLC12A7Q9Y666 1083 aa20.31■□□□□ 0.84
CHRNA3-206ENST00000559658 ZBTB43O43298 467 aa20.3■□□□□ 0.84
CHRNA3-206ENST00000559658 ADD1P35611 737 aaKnown RBP20.3■□□□□ 0.84
CHRNA3-206ENST00000559658 METAP2P50579 478 aaKnown RBP eCLIP20.3■□□□□ 0.84
CHRNA3-206ENST00000559658 JAG1P78504 1218 aa20.3■□□□□ 0.84
CHRNA3-206ENST00000559658 MTA3Q9BTC8 594 aa20.3■□□□□ 0.84
CHRNA3-206ENST00000559658 ZDHHC9Q9Y397 364 aa20.3■□□□□ 0.84
CHRNA3-206ENST00000559658 FOXD4L5Q5VV16 416 aaPredicted RBP20.3■□□□□ 0.84
CHRNA3-206ENST00000559658 NEDD1Q8NHV4 660 aa20.3■□□□□ 0.84
CHRNA3-206ENST00000559658 FOXD4L4Q8WXT5 416 aaPredicted RBP20.3■□□□□ 0.84
CHRNA3-206ENST00000559658 CEP95Q96GE4 821 aa20.3■□□□□ 0.84
CHRNA3-206ENST00000559658 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.3■□□□□ 0.84
CHRNA3-206ENST00000559658 PLIN4Q96Q06 1357 aa20.3■□□□□ 0.84
CHRNA3-206ENST00000559658 PTPDC1A2A3K4 754 aa20.29■□□□□ 0.84
CHRNA3-206ENST00000559658 GOLGA8AA7E2F4 631 aa20.29■□□□□ 0.84
CHRNA3-206ENST00000559658 UBE2Q2LH0YL09 131 aa20.29■□□□□ 0.84
CHRNA3-206ENST00000559658 H7C1D1 291 aa20.29■□□□□ 0.84
CHRNA3-206ENST00000559658 RASA3Q14644 834 aa20.29■□□□□ 0.84
CHRNA3-206ENST00000559658 CMTR1Q8N1G2 835 aaKnown RBP20.29■□□□□ 0.84
CHRNA3-206ENST00000559658 NUP133Q8WUM0 1156 aa20.29■□□□□ 0.84
CHRNA3-206ENST00000559658 POLR2AP24928 1970 aaKnown RBP20.29■□□□□ 0.84
CHRNA3-206ENST00000559658 GDF11O95390 407 aa20.28■□□□□ 0.84
CHRNA3-206ENST00000559658 ANGEL2Q5VTE6 544 aaKnown RBP20.28■□□□□ 0.84
CHRNA3-206ENST00000559658 FKBP1CQ5VVH2 108 aa20.28■□□□□ 0.84
CHRNA3-206ENST00000559658 TEPSINQ96N21 525 aa20.28■□□□□ 0.84
CHRNA3-206ENST00000559658 ZNF287Q9HBT7 754 aa20.28■□□□□ 0.84
CHRNA3-206ENST00000559658 CWC22Q9HCG8 908 aaKnown RBP20.28■□□□□ 0.84
CHRNA3-206ENST00000559658 SWAP70Q9UH65 585 aa20.28■□□□□ 0.84
CHRNA3-206ENST00000559658 NID2Q14112 1375 aa20.28■□□□□ 0.84
CHRNA3-206ENST00000559658 MIGA2Q7L4E1 593 aa20.28■□□□□ 0.84
CHRNA3-206ENST00000559658 FAM83AQ86UY5 434 aa20.28■□□□□ 0.84
CHRNA3-206ENST00000559658 METTL16Q86W50 562 aaKnown RBP20.28■□□□□ 0.84
CHRNA3-206ENST00000559658 SMARCC2Q8TAQ2 1214 aa20.28■□□□□ 0.84
CHRNA3-206ENST00000559658 STX8Q9UNK0 236 aa20.28■□□□□ 0.84
CHRNA3-206ENST00000559658 MYH4Q9Y623 1939 aa20.28■□□□□ 0.84
CHRNA3-206ENST00000559658 IGKV6D-41A0A0C4DH26 115 aa20.27■□□□□ 0.84
CHRNA3-206ENST00000559658 FOSBP53539 338 aa20.27■□□□□ 0.84
CHRNA3-206ENST00000559658 TROAPQ12815 778 aa20.27■□□□□ 0.84
CHRNA3-206ENST00000559658 CHAMP1Q96JM3 812 aa20.27■□□□□ 0.84
CHRNA3-206ENST00000559658 TCP11L1Q9NUJ3 509 aa20.27■□□□□ 0.84
CHRNA3-206ENST00000559658 GGA3Q9NZ52 723 aa20.27■□□□□ 0.84
CHRNA3-206ENST00000559658 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.27■□□□□ 0.84
CHRNA3-206ENST00000559658 CIZ1Q9ULV3 898 aaPredicted RBP20.27■□□□□ 0.84
CHRNA3-206ENST00000559658 FDPSP14324 419 aaKnown RBP20.26■□□□□ 0.83
CHRNA3-206ENST00000559658 RAB3GAP1Q15042 981 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms