RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 CEP120Q8N960 986 aa8.53□□□□□ -1.04
CRNDE-207ENST00000559598 TMC1Q8TDI8 760 aa8.53□□□□□ -1.04
CRNDE-207ENST00000559598 RBCK1Q9BYM8 510 aa8.53□□□□□ -1.04
CRNDE-207ENST00000559598 DCTN4Q9UJW0 460 aa8.53□□□□□ -1.04
CRNDE-207ENST00000559598 TRAPPC3LQ5T215 181 aa8.52□□□□□ -1.05
CRNDE-207ENST00000559598 RASSF4Q9H2L5 321 aa8.52□□□□□ -1.05
CRNDE-207ENST00000559598 ZFYVE28Q9HCC9 887 aa8.52□□□□□ -1.05
CRNDE-207ENST00000559598 PNPLA7Q6ZV29 1317 aa8.52□□□□□ -1.05
CRNDE-207ENST00000559598 TTC21AQ8NDW8 1320 aa8.52□□□□□ -1.05
CRNDE-207ENST00000559598 CENPJQ9HC77 1338 aaPredicted RBP8.52□□□□□ -1.05
CRNDE-207ENST00000559598 MON2Q7Z3U7 1717 aa8.51□□□□□ -1.05
CRNDE-207ENST00000559598 HMGB2P26583 209 aaKnown RBP8.51□□□□□ -1.05
CRNDE-207ENST00000559598 GATA4P43694 442 aa8.51□□□□□ -1.05
CRNDE-207ENST00000559598 CEP135Q66GS9 1140 aa8.51□□□□□ -1.05
CRNDE-207ENST00000559598 GDF6Q6KF10 455 aaPredicted RBP8.51□□□□□ -1.05
CRNDE-207ENST00000559598 DMRTC2Q8IXT2 367 aaPredicted RBP8.51□□□□□ -1.05
CRNDE-207ENST00000559598 PBX4Q9BYU1 374 aa8.51□□□□□ -1.05
CRNDE-207ENST00000559598 TRIM33Q9UPN9 1127 aa8.51□□□□□ -1.05
CRNDE-207ENST00000559598 DOT1LQ8TEK3 1739 aa8.51□□□□□ -1.05
CRNDE-207ENST00000559598 FAM229AH3BQW9 127 aa8.5□□□□□ -1.05
CRNDE-207ENST00000559598 GPR182O15218 404 aa8.5□□□□□ -1.05
CRNDE-207ENST00000559598 SMNDC1O75940 238 aaKnown RBP eCLIP8.5□□□□□ -1.05
CRNDE-207ENST00000559598 IGHA2P01877 340 aa8.5□□□□□ -1.05
CRNDE-207ENST00000559598 NEFLP07196 543 aa8.5□□□□□ -1.05
CRNDE-207ENST00000559598 IL2RBP14784 551 aa8.5□□□□□ -1.05
CRNDE-207ENST00000559598 YBX3P16989 372 aaKnown RBP eCLIP8.5□□□□□ -1.05
CRNDE-207ENST00000559598 MAPK1P28482 360 aa8.5□□□□□ -1.05
CRNDE-207ENST00000559598 TRIM28Q13263 835 aaKnown RBP8.5□□□□□ -1.05
CRNDE-207ENST00000559598 XP32Q5T750 250 aa8.5□□□□□ -1.05
CRNDE-207ENST00000559598 WFDC8Q8IUA0 241 aa8.5□□□□□ -1.05
CRNDE-207ENST00000559598 NLGN2Q8NFZ4 835 aa8.5□□□□□ -1.05
CRNDE-207ENST00000559598 ACSBG1Q96GR2 724 aa8.5□□□□□ -1.05
CRNDE-207ENST00000559598 DMRTB1Q96MA1 342 aa8.5□□□□□ -1.05
CRNDE-207ENST00000559598 TFCP2L1Q9NZI6 479 aa8.5□□□□□ -1.05
CRNDE-207ENST00000559598 A0A0A0MRY4 1105 aa8.49□□□□□ -1.05
CRNDE-207ENST00000559598 EDN3P14138 238 aa8.49□□□□□ -1.05
CRNDE-207ENST00000559598 ACPPP15309 386 aa8.49□□□□□ -1.05
CRNDE-207ENST00000559598 TMC7Q7Z402 723 aa8.49□□□□□ -1.05
CRNDE-207ENST00000559598 CACTIN-AS1Q8N1I8 211 aa8.49□□□□□ -1.05
CRNDE-207ENST00000559598 NACC1Q96RE7 527 aa8.49□□□□□ -1.05
CRNDE-207ENST00000559598 RAB3GAP2Q9H2M9 1393 aa8.48□□□□□ -1.05
CRNDE-207ENST00000559598 RAC1P63000 192 aa8.48□□□□□ -1.05
CRNDE-207ENST00000559598 IL22RA1Q8N6P7 574 aa8.48□□□□□ -1.05
CRNDE-207ENST00000559598 ALKBH8Q96BT7 664 aaKnown RBP8.48□□□□□ -1.05
CRNDE-207ENST00000559598 DZANK1Q9NVP4 752 aa8.48□□□□□ -1.05
CRNDE-207ENST00000559598 CD2APQ9Y5K6 639 aa8.48□□□□□ -1.05
CRNDE-207ENST00000559598 C5P01031 1676 aa8.48□□□□□ -1.05
CRNDE-207ENST00000559598 TTC21BQ7Z4L5 1316 aa8.48□□□□□ -1.05
CRNDE-207ENST00000559598 TAF1LQ8IZX4 1826 aa8.47□□□□□ -1.05
CRNDE-207ENST00000559598 CICQ96RK0 1608 aaPredicted RBP8.47□□□□□ -1.05
CRNDE-207ENST00000559598 WDR90Q96KV7 1748 aa8.47□□□□□ -1.05
CRNDE-207ENST00000559598 NFKBIEO00221 500 aa8.47□□□□□ -1.05
CRNDE-207ENST00000559598 ORC1Q13415 861 aa8.47□□□□□ -1.05
CRNDE-207ENST00000559598 DTWD1Q8N5C7 304 aa8.47□□□□□ -1.05
CRNDE-207ENST00000559598 POP1Q99575 1024 aaKnown RBP8.47□□□□□ -1.05
CRNDE-207ENST00000559598 OSMRQ99650 979 aa8.47□□□□□ -1.05
CRNDE-207ENST00000559598 NIF3L1Q9GZT8 377 aa8.47□□□□□ -1.05
CRNDE-207ENST00000559598 EVC2Q86UK5 1308 aa8.47□□□□□ -1.05
CRNDE-207ENST00000559598 ANKRD36BQ8N2N9 1353 aa8.47□□□□□ -1.05
CRNDE-207ENST00000559598 POLR3DP05423 398 aaPredicted RBP8.46□□□□□ -1.06
CRNDE-207ENST00000559598 DOC2BQ14184 412 aa8.46□□□□□ -1.06
CRNDE-207ENST00000559598 PEAR1Q5VY43 1037 aaPredicted RBP8.46□□□□□ -1.06
CRNDE-207ENST00000559598 FMR1NBQ8N0W7 255 aaPredicted RBP8.46□□□□□ -1.06
CRNDE-207ENST00000559598 ZKSCAN3Q9BRR0 538 aa8.46□□□□□ -1.06
CRNDE-207ENST00000559598 LACRTQ9GZZ8 138 aa8.46□□□□□ -1.06
CRNDE-207ENST00000559598 NLRP2Q9NX02 1062 aa8.46□□□□□ -1.06
CRNDE-207ENST00000559598 USP31Q70CQ4 1352 aa8.46□□□□□ -1.06
CRNDE-207ENST00000559598 CPNE3O75131 537 aaKnown RBP8.45□□□□□ -1.06
CRNDE-207ENST00000559598 TRPA1O75762 1119 aa8.45□□□□□ -1.06
CRNDE-207ENST00000559598 ELNP15502 786 aa8.45□□□□□ -1.06
CRNDE-207ENST00000559598 USPL1Q5W0Q7 1092 aa8.45□□□□□ -1.06
CRNDE-207ENST00000559598 ADAMTSL4Q6UY14 1074 aa8.45□□□□□ -1.06
CRNDE-207ENST00000559598 GALNT12Q8IXK2 581 aa8.45□□□□□ -1.06
CRNDE-207ENST00000559598 Q8N3U1 123 aa8.45□□□□□ -1.06
CRNDE-207ENST00000559598 TMEM102Q8N9M5 508 aaPredicted RBP8.45□□□□□ -1.06
CRNDE-207ENST00000559598 FLAD1Q8NFF5 587 aa8.45□□□□□ -1.06
CRNDE-207ENST00000559598 HHIPQ96QV1 700 aa8.45□□□□□ -1.06
CRNDE-207ENST00000559598 MUC3BQ9H195 1237 aa8.45□□□□□ -1.06
CRNDE-207ENST00000559598 DNAJC25Q9H1X3 360 aa8.45□□□□□ -1.06
CRNDE-207ENST00000559598 SEMA6BQ9H3T3 888 aa8.45□□□□□ -1.06
CRNDE-207ENST00000559598 LATS2Q9NRM7 1088 aa8.45□□□□□ -1.06
CRNDE-207ENST00000559598 PPME1Q9Y570 386 aa8.45□□□□□ -1.06
CRNDE-207ENST00000559598 KTN1Q86UP2 1357 aaKnown RBP8.45□□□□□ -1.06
CRNDE-207ENST00000559598 PDE2AO00408 941 aaPredicted RBP8.44□□□□□ -1.06
CRNDE-207ENST00000559598 EIF1AYO14602 144 aaKnown RBP8.44□□□□□ -1.06
CRNDE-207ENST00000559598 PTPRAP18433 802 aa8.44□□□□□ -1.06
CRNDE-207ENST00000559598 CDC27P30260 824 aa8.44□□□□□ -1.06
CRNDE-207ENST00000559598 GRIK4Q16099 956 aa8.44□□□□□ -1.06
CRNDE-207ENST00000559598 SND1Q7KZF4 910 aaKnown RBP eCLIP8.44□□□□□ -1.06
CRNDE-207ENST00000559598 FBXO11Q86XK2 927 aa8.44□□□□□ -1.06
CRNDE-207ENST00000559598 ADAM19Q9H013 955 aa8.44□□□□□ -1.06
CRNDE-207ENST00000559598 NSD3Q9BZ95 1437 aa8.44□□□□□ -1.06
CRNDE-207ENST00000559598 UBR3Q6ZT12 1888 aa8.43□□□□□ -1.06
CRNDE-207ENST00000559598 FAM177BA6PVY3 158 aa8.43□□□□□ -1.06
CRNDE-207ENST00000559598 TREHO43280 583 aa8.43□□□□□ -1.06
CRNDE-207ENST00000559598 ZSCAN29Q8IWY8 852 aaPredicted RBP8.43□□□□□ -1.06
CRNDE-207ENST00000559598 ZNF526Q8TF50 670 aaPredicted RBP8.43□□□□□ -1.06
CRNDE-207ENST00000559598 NXPE3Q969Y0 559 aa8.43□□□□□ -1.06
CRNDE-207ENST00000559598 CSRNP1Q96S65 589 aa8.43□□□□□ -1.06
CRNDE-207ENST00000559598 CCNL1Q9UK58 526 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms