RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 CYP8B1Q9UNU6 501 aa5.73□□□□□ -1.49
CASC4-210ENST00000559550 SLFN14P0C7P3 912 aa5.72□□□□□ -1.49
CASC4-210ENST00000559550 CDK8P49336 464 aa5.72□□□□□ -1.49
CASC4-210ENST00000559550 RPS26P62854 115 aaKnown RBP5.72□□□□□ -1.49
CASC4-210ENST00000559550 ID3Q02535 119 aa5.72□□□□□ -1.49
CASC4-210ENST00000559550 SEPT6Q14141 434 aa5.72□□□□□ -1.49
CASC4-210ENST00000559550 CYP27C1Q4G0S4 372 aa5.72□□□□□ -1.49
CASC4-210ENST00000559550 ANKLE2Q86XL3 938 aa5.72□□□□□ -1.49
CASC4-210ENST00000559550 PHC3Q8NDX5 983 aa5.72□□□□□ -1.49
CASC4-210ENST00000559550 ZNF428Q96B54 188 aa5.72□□□□□ -1.49
CASC4-210ENST00000559550 FANCD2OSQ96PS1 177 aa5.72□□□□□ -1.49
CASC4-210ENST00000559550 DCDC2CA8MYV0 355 aa5.71□□□□□ -1.5
CASC4-210ENST00000559550 RECKO95980 971 aa5.71□□□□□ -1.5
CASC4-210ENST00000559550 NEFMP07197 916 aa5.71□□□□□ -1.5
CASC4-210ENST00000559550 C1QTNF9P0C862 333 aa5.71□□□□□ -1.5
CASC4-210ENST00000559550 ASPAP45381 313 aa5.71□□□□□ -1.5
CASC4-210ENST00000559550 INPP5AQ14642 412 aa5.71□□□□□ -1.5
CASC4-210ENST00000559550 SLC23A3Q6PIS1 610 aa5.71□□□□□ -1.5
CASC4-210ENST00000559550 SYDE1Q6ZW31 735 aaPredicted RBP5.71□□□□□ -1.5
CASC4-210ENST00000559550 LIN37Q96GY3 246 aaPredicted RBP5.71□□□□□ -1.5
CASC4-210ENST00000559550 PCDHA4Q9UN74 947 aa5.71□□□□□ -1.5
CASC4-210ENST00000559550 CSADQ9Y600 493 aa5.71□□□□□ -1.5
CASC4-210ENST00000559550 INHBBP09529 407 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 HCLS1P14317 486 aaPredicted RBP5.7□□□□□ -1.5
CASC4-210ENST00000559550 ITGAEP38570 1179 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 TTLL4Q14679 1199 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 KCNMB1Q16558 191 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 AOC3Q16853 763 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 TSNAXIP1Q2TAA8 658 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 PPM1JQ5JR12 505 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 LRFN4Q6PJG9 635 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 ERMP1Q7Z2K6 904 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 C12orf40Q86WS4 652 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 TMEM87AQ8NBN3 555 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 MRRFQ96E11 262 aaKnown RBP5.7□□□□□ -1.5
CASC4-210ENST00000559550 C20orf173Q96LM9 149 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 LGR6Q9HBX8 967 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 KBTBD4Q9NVX7 518 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 PLAGL2Q9UPG8 496 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 DAGLAQ9Y4D2 1042 aa5.7□□□□□ -1.5
CASC4-210ENST00000559550 PF4P02776 101 aa5.69□□□□□ -1.5
CASC4-210ENST00000559550 FAM87AP0C7U9 286 aa5.69□□□□□ -1.5
CASC4-210ENST00000559550 NTF4P34130 210 aa5.69□□□□□ -1.5
CASC4-210ENST00000559550 ERVK-24P63145 666 aa5.69□□□□□ -1.5
CASC4-210ENST00000559550 IFI16Q16666 785 aaKnown RBP5.69□□□□□ -1.5
CASC4-210ENST00000559550 SCARA3Q6AZY7 606 aa5.69□□□□□ -1.5
CASC4-210ENST00000559550 RHOVQ96L33 236 aa5.69□□□□□ -1.5
CASC4-210ENST00000559550 TMEM74Q96NL1 305 aa5.69□□□□□ -1.5
CASC4-210ENST00000559550 RSRP1Q9BUV0 290 aa5.69□□□□□ -1.5
CASC4-210ENST00000559550 ATXN3LQ9H3M9 355 aa5.69□□□□□ -1.5
CASC4-210ENST00000559550 MKNK2Q9HBH9 465 aa5.69□□□□□ -1.5
CASC4-210ENST00000559550 PRDM7Q9NQW5 492 aa5.69□□□□□ -1.5
CASC4-210ENST00000559550 MINDY4BA8MYZ0 360 aa5.68□□□□□ -1.5
CASC4-210ENST00000559550 RLBP1P12271 317 aa5.68□□□□□ -1.5
CASC4-210ENST00000559550 VAMP1P23763 118 aa5.68□□□□□ -1.5
CASC4-210ENST00000559550 GBP2P32456 591 aaPredicted RBP5.68□□□□□ -1.5
CASC4-210ENST00000559550 OXCT1P55809 520 aa5.68□□□□□ -1.5
CASC4-210ENST00000559550 RING1Q06587 406 aa5.68□□□□□ -1.5
CASC4-210ENST00000559550 CAMK2GQ13555 558 aaPredicted RBP5.68□□□□□ -1.5
CASC4-210ENST00000559550 FYB2Q5VWT5 728 aa5.68□□□□□ -1.5
CASC4-210ENST00000559550 BNC2Q6ZN30 1099 aaPredicted RBP5.68□□□□□ -1.5
CASC4-210ENST00000559550 PRR23BQ6ZRT6 265 aa5.68□□□□□ -1.5
CASC4-210ENST00000559550 UBE3DQ7Z6J8 389 aa5.68□□□□□ -1.5
CASC4-210ENST00000559550 RNF214Q8ND24 703 aa5.68□□□□□ -1.5
CASC4-210ENST00000559550 JARID2Q92833 1246 aaPredicted RBP5.68□□□□□ -1.5
CASC4-210ENST00000559550 PLPPR2Q96GM1 343 aa5.68□□□□□ -1.5
CASC4-210ENST00000559550 HRASLS5Q96KN8 279 aa5.68□□□□□ -1.5
CASC4-210ENST00000559550 BCL11AQ9H165 835 aa5.68□□□□□ -1.5
CASC4-210ENST00000559550 MIR1-1HGQ9H1L0 117 aa5.68□□□□□ -1.5
CASC4-210ENST00000559550 GGT7Q9UJ14 662 aa5.68□□□□□ -1.5
CASC4-210ENST00000559550 RNGTTO60942 597 aaKnown RBP5.67□□□□□ -1.5
CASC4-210ENST00000559550 LMNB1P20700 586 aa5.67□□□□□ -1.5
CASC4-210ENST00000559550 GARTP22102 1010 aa5.67□□□□□ -1.5
CASC4-210ENST00000559550 CTSWP56202 376 aa5.67□□□□□ -1.5
CASC4-210ENST00000559550 FANCCQ00597 558 aa5.67□□□□□ -1.5
CASC4-210ENST00000559550 HNRNPUQ00839 825 aaKnown RBP eCLIP5.67□□□□□ -1.5
CASC4-210ENST00000559550 FAM160A1Q05DH4 1040 aa5.67□□□□□ -1.5
CASC4-210ENST00000559550 CDK5R2Q13319 367 aa5.67□□□□□ -1.5
CASC4-210ENST00000559550 WIPI1Q5MNZ9 446 aaPredicted RBP5.67□□□□□ -1.5
CASC4-210ENST00000559550 ANGEL2Q5VTE6 544 aaKnown RBP5.67□□□□□ -1.5
CASC4-210ENST00000559550 CYFIP1Q7L576 1253 aa5.67□□□□□ -1.5
CASC4-210ENST00000559550 RELL1Q8IUW5 271 aa5.67□□□□□ -1.5
CASC4-210ENST00000559550 ISL2Q96A47 359 aa5.67□□□□□ -1.5
CASC4-210ENST00000559550 PIDD1Q9HB75 910 aa5.67□□□□□ -1.5
CASC4-210ENST00000559550 CTNND2Q9UQB3 1225 aa5.67□□□□□ -1.5
CASC4-210ENST00000559550 PRAMEF27A3QJZ7 478 aa5.66□□□□□ -1.5
CASC4-210ENST00000559550 FAM221AA4D161 298 aa5.66□□□□□ -1.5
CASC4-210ENST00000559550 GFRA2O00451 464 aa5.66□□□□□ -1.5
CASC4-210ENST00000559550 F13A1P00488 732 aa5.66□□□□□ -1.5
CASC4-210ENST00000559550 CEACAM5P06731 702 aa5.66□□□□□ -1.5
CASC4-210ENST00000559550 ZNF76P36508 570 aa5.66□□□□□ -1.5
CASC4-210ENST00000559550 LMNB2Q03252 620 aa5.66□□□□□ -1.5
CASC4-210ENST00000559550 ZBTB37Q5TC79 503 aa5.66□□□□□ -1.5
CASC4-210ENST00000559550 HS2ST1Q7LGA3 356 aa5.66□□□□□ -1.5
CASC4-210ENST00000559550 SMYD4Q8IYR2 804 aaPredicted RBP5.66□□□□□ -1.5
CASC4-210ENST00000559550 ELMO3Q96BJ8 720 aa5.66□□□□□ -1.5
CASC4-210ENST00000559550 TNKS2Q9H2K2 1166 aa5.66□□□□□ -1.5
CASC4-210ENST00000559550 HDXQ7Z353 690 aa5.65□□□□□ -1.5
CASC4-210ENST00000559550 GOLM1Q8NBJ4 401 aa5.65□□□□□ -1.5
CASC4-210ENST00000559550 FBXO27Q8NI29 283 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms