RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 TRIM43Q96BQ3 446 aaPredicted RBP12.12□□□□□ -0.47
SMAD3-211ENST00000559460 P2RX7Q99572 595 aaKnown RBP12.12□□□□□ -0.47
SMAD3-211ENST00000559460 CXXC1Q9P0U4 656 aaPredicted RBP12.12□□□□□ -0.47
SMAD3-211ENST00000559460 PHIPQ8WWQ0 1821 aa12.11□□□□□ -0.47
SMAD3-211ENST00000559460 MUC3AQ02505 3323 aa12.11□□□□□ -0.47
SMAD3-211ENST00000559460 APAF1O14727 1248 aa12.11□□□□□ -0.47
SMAD3-211ENST00000559460 TBC1D12O60347 775 aa12.11□□□□□ -0.47
SMAD3-211ENST00000559460 LRRC24Q50LG9 513 aa12.11□□□□□ -0.47
SMAD3-211ENST00000559460 BEND3Q5T5X7 828 aa12.11□□□□□ -0.47
SMAD3-211ENST00000559460 SH3BP5LQ7L8J4 393 aa12.11□□□□□ -0.47
SMAD3-211ENST00000559460 ZGPATQ8N5A5 531 aaKnown RBP12.11□□□□□ -0.47
SMAD3-211ENST00000559460 FERMT2Q96AC1 680 aa12.11□□□□□ -0.47
SMAD3-211ENST00000559460 PORCNQ9H237 461 aa12.11□□□□□ -0.47
SMAD3-211ENST00000559460 TXNRD2Q9NNW7 524 aa12.11□□□□□ -0.47
SMAD3-211ENST00000559460 MSRAQ9UJ68 235 aa12.11□□□□□ -0.47
SMAD3-211ENST00000559460 FAM196BA6NMK8 535 aa12.1□□□□□ -0.47
SMAD3-211ENST00000559460 F6X3S4 739 aa12.1□□□□□ -0.47
SMAD3-211ENST00000559460 PEX10O60683 326 aa12.1□□□□□ -0.47
SMAD3-211ENST00000559460 HOXA7P31268 230 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-211ENST00000559460 CAP2P40123 477 aa12.1□□□□□ -0.47
SMAD3-211ENST00000559460 ADCYAP1R1P41586 468 aa12.1□□□□□ -0.47
SMAD3-211ENST00000559460 SNX17Q15036 470 aa12.1□□□□□ -0.47
SMAD3-211ENST00000559460 SLC15A5A6NIM6 579 aa12.09□□□□□ -0.47
SMAD3-211ENST00000559460 C19orf81C9J6K1 198 aa12.09□□□□□ -0.47
SMAD3-211ENST00000559460 SLURP2P0DP57 97 aa12.09□□□□□ -0.47
SMAD3-211ENST00000559460 CYP2C19P33261 490 aa12.09□□□□□ -0.47
SMAD3-211ENST00000559460 BACE1P56817 501 aa12.09□□□□□ -0.47
SMAD3-211ENST00000559460 TLE2Q04725 743 aa12.09□□□□□ -0.47
SMAD3-211ENST00000559460 RAB30Q15771 203 aa12.09□□□□□ -0.47
SMAD3-211ENST00000559460 C1orf53Q5VUE5 145 aa12.09□□□□□ -0.47
SMAD3-211ENST00000559460 LPIN2Q92539 896 aa12.09□□□□□ -0.47
SMAD3-211ENST00000559460 EPHX3Q9H6B9 360 aa12.09□□□□□ -0.47
SMAD3-211ENST00000559460 TMEM39AQ9NV64 488 aa12.09□□□□□ -0.47
SMAD3-211ENST00000559460 RBPJLQ9UBG7 517 aa12.09□□□□□ -0.47
SMAD3-211ENST00000559460 NDUFB9Q9Y6M9 179 aa12.09□□□□□ -0.47
SMAD3-211ENST00000559460 LAMA2P24043 3122 aaKnown RBP12.09□□□□□ -0.47
SMAD3-211ENST00000559460 MYH13Q9UKX3 1938 aa12.09□□□□□ -0.47
SMAD3-211ENST00000559460 PQBP1O60828 265 aaKnown RBP12.08□□□□□ -0.48
SMAD3-211ENST00000559460 BMP1P13497 986 aa12.08□□□□□ -0.48
SMAD3-211ENST00000559460 BTDP43251 543 aa12.08□□□□□ -0.48
SMAD3-211ENST00000559460 MRE11P49959 708 aa12.08□□□□□ -0.48
SMAD3-211ENST00000559460 EPHB4P54760 987 aa12.08□□□□□ -0.48
SMAD3-211ENST00000559460 Q3C1V9 767 aa12.08□□□□□ -0.48
SMAD3-211ENST00000559460 ANO1Q5XXA6 986 aa12.08□□□□□ -0.48
SMAD3-211ENST00000559460 DPP9Q86TI2 863 aa12.08□□□□□ -0.48
SMAD3-211ENST00000559460 VGLL2Q8N8G2 317 aa12.08□□□□□ -0.48
SMAD3-211ENST00000559460 SUCLG2Q96I99 432 aa12.08□□□□□ -0.48
SMAD3-211ENST00000559460 TRIM34Q9BYJ4 488 aa12.08□□□□□ -0.48
SMAD3-211ENST00000559460 PBX4Q9BYU1 374 aa12.08□□□□□ -0.48
SMAD3-211ENST00000559460 SLC28A3Q9HAS3 691 aa12.08□□□□□ -0.48
SMAD3-211ENST00000559460 DDX4Q9NQI0 724 aaKnown RBP12.08□□□□□ -0.48
SMAD3-211ENST00000559460 FLRT1Q9NZU1 646 aa12.08□□□□□ -0.48
SMAD3-211ENST00000559460 DENND2AQ9ULE3 1009 aa12.08□□□□□ -0.48
SMAD3-211ENST00000559460 RFX7Q2KHR2 1363 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 USP17L10C9JJH3 530 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 APBB1O00213 710 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 GPR37L1O60883 481 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 ALDH1L1O75891 902 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 ASNSP08243 561 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 CYBAP13498 195 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 PTPREP23469 700 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 SLC4A10Q6U841 1118 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 WDR18Q9BV38 432 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 SRCIN1Q9C0H9 1055 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 MTIF3Q9H2K0 278 aaKnown RBP12.07□□□□□ -0.48
SMAD3-211ENST00000559460 HERC5Q9UII4 1024 aaKnown RBP12.07□□□□□ -0.48
SMAD3-211ENST00000559460 RABGAP1Q9Y3P9 1069 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 GAKO14976 1311 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 SALL1Q9NSC2 1324 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 CDH23Q9H251 3354 aa12.07□□□□□ -0.48
SMAD3-211ENST00000559460 RLFQ13129 1914 aa12.06□□□□□ -0.48
SMAD3-211ENST00000559460 DCDC2CA8MYV0 355 aa12.06□□□□□ -0.48
SMAD3-211ENST00000559460 SEMA3EO15041 775 aa12.06□□□□□ -0.48
SMAD3-211ENST00000559460 KIAA0355O15063 1070 aa12.06□□□□□ -0.48
SMAD3-211ENST00000559460 SEPT4O43236 478 aa12.06□□□□□ -0.48
SMAD3-211ENST00000559460 PBX2P40425 430 aa12.06□□□□□ -0.48
SMAD3-211ENST00000559460 KCNQ1P51787 676 aa12.06□□□□□ -0.48
SMAD3-211ENST00000559460 TFF2Q03403 129 aa12.06□□□□□ -0.48
SMAD3-211ENST00000559460 PPIGQ13427 754 aaKnown RBP eCLIP12.06□□□□□ -0.481e-6■■■□□ 16.7
SMAD3-211ENST00000559460 SPTY2D1Q68D10 685 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-211ENST00000559460 SLC44A5Q8NCS7 719 aa12.06□□□□□ -0.48
SMAD3-211ENST00000559460 SLC5A4Q9NY91 659 aa12.06□□□□□ -0.48
SMAD3-211ENST00000559460 ABCF2Q9UG63 623 aa12.06□□□□□ -0.48
SMAD3-211ENST00000559460 FAM86C2PA6NEL3 165 aa12.05□□□□□ -0.48
SMAD3-211ENST00000559460 HOXC6P09630 235 aa12.05□□□□□ -0.48
SMAD3-211ENST00000559460 FGFR2P21802 821 aa12.05□□□□□ -0.48
SMAD3-211ENST00000559460 ITGB8P26012 769 aa12.05□□□□□ -0.48
SMAD3-211ENST00000559460 ADGRE1Q14246 886 aa12.05□□□□□ -0.48
SMAD3-211ENST00000559460 LRRC41Q15345 812 aa12.05□□□□□ -0.48
SMAD3-211ENST00000559460 RNF180Q86T96 592 aa12.05□□□□□ -0.48
SMAD3-211ENST00000559460 NPLOC4Q8TAT6 608 aa12.05□□□□□ -0.48
SMAD3-211ENST00000559460 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.05□□□□□ -0.484e-9■□□□□ 10.6
SMAD3-211ENST00000559460 BICC1Q9H694 974 aaKnown RBP12.05□□□□□ -0.48
SMAD3-211ENST00000559460 MROH7-TTC4A0A0A0MT08 1334 aa12.05□□□□□ -0.48
SMAD3-211ENST00000559460 GRXCR1A8MXD5 290 aa12.04□□□□□ -0.48
SMAD3-211ENST00000559460 GTPBP6O43824 516 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-211ENST00000559460 GRB14Q14449 540 aa12.04□□□□□ -0.48
SMAD3-211ENST00000559460 PSRC1Q6PGN9 363 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-211ENST00000559460 CRACR2BQ8N4Y2 399 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-211ENST00000559460 TRPV1Q8NER1 839 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms