RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 LACTBP83111 547 aaPredicted RBP15.19■□□□□ 0.02
LRRC28-214ENST00000559433 CAP1Q01518 475 aa15.19■□□□□ 0.02
LRRC28-214ENST00000559433 UBE3CQ15386 1083 aa15.19■□□□□ 0.02
LRRC28-214ENST00000559433 NBPF11Q86T75 865 aa15.19■□□□□ 0.02
LRRC28-214ENST00000559433 SDR42E1Q8WUS8 393 aa15.19■□□□□ 0.02
LRRC28-214ENST00000559433 MCM9Q9NXL9 1143 aa15.19■□□□□ 0.02
LRRC28-214ENST00000559433 ZBTB21Q9ULJ3 1066 aa15.19■□□□□ 0.02
LRRC28-214ENST00000559433 TTC41PQ6P2S7 1318 aa15.18■□□□□ 0.02
LRRC28-214ENST00000559433 FMNL1O95466 1100 aaPredicted RBP15.18■□□□□ 0.02
LRRC28-214ENST00000559433 HMGCS2P54868 508 aa15.18■□□□□ 0.02
LRRC28-214ENST00000559433 JAG1P78504 1218 aa15.18■□□□□ 0.02
LRRC28-214ENST00000559433 HDAC1Q13547 482 aaPredicted RBP15.18■□□□□ 0.02
LRRC28-214ENST00000559433 AAMPQ13685 434 aa15.18■□□□□ 0.02
LRRC28-214ENST00000559433 SHROOM1Q2M3G4 852 aaPredicted RBP15.18■□□□□ 0.02
LRRC28-214ENST00000559433 C17orf99Q6UX52 265 aa15.18■□□□□ 0.02
LRRC28-214ENST00000559433 PROCA1Q8NCQ7 364 aaPredicted RBP15.18■□□□□ 0.02
LRRC28-214ENST00000559433 OTUD7AQ8TE49 926 aaPredicted RBP15.18■□□□□ 0.02
LRRC28-214ENST00000559433 GCC1Q96CN9 775 aa15.18■□□□□ 0.02
LRRC28-214ENST00000559433 GINM1Q9NU53 330 aa15.18■□□□□ 0.02
LRRC28-214ENST00000559433 AGTPBP1Q9UPW5 1226 aa15.18■□□□□ 0.02
LRRC28-214ENST00000559433 SLC45A1Q9Y2W3 748 aa15.18■□□□□ 0.02
LRRC28-214ENST00000559433 U3KPZ7 1027 aaPredicted RBP15.18■□□□□ 0.02
LRRC28-214ENST00000559433 ERC2O15083 957 aa15.17■□□□□ 0.02
LRRC28-214ENST00000559433 ECM2O94769 699 aaPredicted RBP15.17■□□□□ 0.02
LRRC28-214ENST00000559433 GNRH1P01148 92 aa15.17■□□□□ 0.02
LRRC28-214ENST00000559433 PLCD1P51178 756 aa15.17■□□□□ 0.02
LRRC28-214ENST00000559433 PABPC4Q13310 644 aaKnown RBP eCLIP15.17■□□□□ 0.02
LRRC28-214ENST00000559433 MTMR2Q13614 643 aa15.17■□□□□ 0.02
LRRC28-214ENST00000559433 TREML2Q5T2D2 321 aa15.17■□□□□ 0.02
LRRC28-214ENST00000559433 ANKRD45Q5TZF3 282 aa15.17■□□□□ 0.02
LRRC28-214ENST00000559433 SAMD1Q6SPF0 538 aaPredicted RBP15.17■□□□□ 0.02
LRRC28-214ENST00000559433 KBTBD3Q8NAB2 608 aa15.17■□□□□ 0.02
LRRC28-214ENST00000559433 SMCR8Q8TEV9 937 aaPredicted RBP15.17■□□□□ 0.02
LRRC28-214ENST00000559433 WDR18Q9BV38 432 aa15.17■□□□□ 0.02
LRRC28-214ENST00000559433 ARHGAP39Q9C0H5 1083 aa15.17■□□□□ 0.02
LRRC28-214ENST00000559433 DCP1AQ9NPI6 582 aaPredicted RBP15.17■□□□□ 0.02
LRRC28-214ENST00000559433 HTTP42858 3142 aa15.17■□□□□ 0.02
LRRC28-214ENST00000559433 PRKAB2O43741 272 aa15.16■□□□□ 0.02
LRRC28-214ENST00000559433 GH2P01242 217 aa15.16■□□□□ 0.02
LRRC28-214ENST00000559433 MX1P20591 662 aa15.16■□□□□ 0.02
LRRC28-214ENST00000559433 PSMC4P43686 418 aa15.16■□□□□ 0.02
LRRC28-214ENST00000559433 CERKLQ49MI3 558 aaPredicted RBP15.16■□□□□ 0.02
LRRC28-214ENST00000559433 TATDN1Q6P1N9 297 aa15.16■□□□□ 0.02
LRRC28-214ENST00000559433 EXOC6Q8TAG9 804 aa15.16■□□□□ 0.02
LRRC28-214ENST00000559433 DDRGK1Q96HY6 314 aa15.16■□□□□ 0.02
LRRC28-214ENST00000559433 ATP8A2Q9NTI2 1148 aa15.16■□□□□ 0.02
LRRC28-214ENST00000559433 TMOD4Q9NZQ9 345 aa15.16■□□□□ 0.02
LRRC28-214ENST00000559433 PNMA3Q9UL41 463 aa15.16■□□□□ 0.02
LRRC28-214ENST00000559433 RNF113AO15541 343 aaKnown RBP15.15■□□□□ 0.02
LRRC28-214ENST00000559433 GLRX3O76003 335 aaKnown RBP15.15■□□□□ 0.02
LRRC28-214ENST00000559433 CYP2D6P10635 497 aa15.15■□□□□ 0.02
LRRC28-214ENST00000559433 OSBPP22059 807 aa15.15■□□□□ 0.02
LRRC28-214ENST00000559433 SHMT1P34896 483 aa15.15■□□□□ 0.02
LRRC28-214ENST00000559433 PRMT2P55345 433 aa15.15■□□□□ 0.02
LRRC28-214ENST00000559433 BACE1P56817 501 aa15.15■□□□□ 0.02
LRRC28-214ENST00000559433 EVX2Q03828 476 aa15.15■□□□□ 0.02
LRRC28-214ENST00000559433 ABCB5Q2M3G0 1257 aa15.15■□□□□ 0.02
LRRC28-214ENST00000559433 SLC9C1Q4G0N8 1177 aa15.15■□□□□ 0.02
LRRC28-214ENST00000559433 SH3D19Q5HYK7 790 aa15.15■□□□□ 0.02
LRRC28-214ENST00000559433 PI4K2BQ8TCG2 481 aa15.15■□□□□ 0.02
LRRC28-214ENST00000559433 TMEM106CQ9BVX2 250 aa15.15■□□□□ 0.02
LRRC28-214ENST00000559433 PUS7LQ9H0K6 701 aaKnown RBP15.15■□□□□ 0.02
LRRC28-214ENST00000559433 SUPT16HQ9Y5B9 1047 aaKnown RBP15.15■□□□□ 0.02
LRRC28-214ENST00000559433 SLC4A4Q9Y6R1 1079 aa15.15■□□□□ 0.02
LRRC28-214ENST00000559433 USP17L10C9JJH3 530 aa15.14■□□□□ 0.01
LRRC28-214ENST00000559433 ZFYP08048 801 aaPredicted RBP15.14■□□□□ 0.01
LRRC28-214ENST00000559433 BCRP11274 1271 aa15.14■□□□□ 0.01
LRRC28-214ENST00000559433 GABPAQ06546 454 aa15.14■□□□□ 0.01
LRRC28-214ENST00000559433 RAB3GAP1Q15042 981 aa15.14■□□□□ 0.01
LRRC28-214ENST00000559433 AMOTL1Q8IY63 956 aa15.14■□□□□ 0.01
LRRC28-214ENST00000559433 RWDD1Q9H446 243 aaPredicted RBP15.14■□□□□ 0.01
LRRC28-214ENST00000559433 CABP5Q9NP86 173 aa15.14■□□□□ 0.01
LRRC28-214ENST00000559433 C19orf81C9J6K1 198 aa15.13■□□□□ 0.01
LRRC28-214ENST00000559433 CTGFP29279 349 aa15.13■□□□□ 0.01
LRRC28-214ENST00000559433 FCGRTP55899 365 aa15.13■□□□□ 0.01
LRRC28-214ENST00000559433 LRRFIP1Q32MZ4 808 aaKnown RBP15.13■□□□□ 0.01
LRRC28-214ENST00000559433 RAET1EQ8TD07 263 aa15.13■□□□□ 0.01
LRRC28-214ENST00000559433 APPBP2Q92624 585 aa15.13■□□□□ 0.01
LRRC28-214ENST00000559433 TRIM47Q96LD4 638 aa15.13■□□□□ 0.01
LRRC28-214ENST00000559433 FEZ1Q99689 392 aa15.13■□□□□ 0.01
LRRC28-214ENST00000559433 FSD1Q9BTV5 496 aa15.13■□□□□ 0.01
LRRC28-214ENST00000559433 PTCH2Q9Y6C5 1203 aa15.13■□□□□ 0.01
LRRC28-214ENST00000559433 RBBP6Q7Z6E9 1792 aaKnown RBP15.13■□□□□ 0.01
LRRC28-214ENST00000559433 SALL3Q9BXA9 1300 aa15.13■□□□□ 0.01
LRRC28-214ENST00000559433 CENPFP49454 3210 aa15.12■□□□□ 0.01
LRRC28-214ENST00000559433 MPHOSPH10O00566 681 aaKnown RBP15.12■□□□□ 0.01
LRRC28-214ENST00000559433 SLC44A5Q8NCS7 719 aa15.12■□□□□ 0.01
LRRC28-214ENST00000559433 OSBP2Q969R2 916 aa15.12■□□□□ 0.01
LRRC28-214ENST00000559433 DYNLL2Q96FJ2 89 aa15.12■□□□□ 0.01
LRRC28-214ENST00000559433 STRBPQ96SI9 672 aaKnown RBP15.12■□□□□ 0.01
LRRC28-214ENST00000559433 BIN2Q9UBW5 565 aaPredicted RBP15.12■□□□□ 0.01
LRRC28-214ENST00000559433 SWAP70Q9UH65 585 aa15.12■□□□□ 0.01
LRRC28-214ENST00000559433 CYP2D7A0A087X1C5 515 aa15.11■□□□□ 0.01
LRRC28-214ENST00000559433 USP17L12C9JPN9 530 aa15.11■□□□□ 0.01
LRRC28-214ENST00000559433 USP17L21D6R901 530 aa15.11■□□□□ 0.01
LRRC28-214ENST00000559433 IRX3P78415 501 aaPredicted RBP15.11■□□□□ 0.01
LRRC28-214ENST00000559433 ZYXQ15942 572 aaKnown RBP15.11■□□□□ 0.01
LRRC28-214ENST00000559433 C12orf60Q5U649 245 aa15.11■□□□□ 0.01
LRRC28-214ENST00000559433 USP17L2Q6R6M4 530 aa15.11■□□□□ 0.01
LRRC28-214ENST00000559433 ANKRD13CQ8N6S4 541 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms