RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 MPHOSPH10O00566 681 aaKnown RBP9.86□□□□□ -0.83
SNX1-207ENST00000559401 PRKAB2O43741 272 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 GLRX3O76003 335 aaKnown RBP9.86□□□□□ -0.83
SNX1-207ENST00000559401 GH2P01242 217 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 CYP2D6P10635 497 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 PLCD1P51178 756 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 SOX10P56693 466 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 HDAC1Q13547 482 aaPredicted RBP9.86□□□□□ -0.83
SNX1-207ENST00000559401 MTMR2Q13614 643 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 UBE3CQ15386 1083 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 SHROOM1Q2M3G4 852 aaPredicted RBP9.86□□□□□ -0.83
SNX1-207ENST00000559401 LRRFIP1Q32MZ4 808 aaKnown RBP9.86□□□□□ -0.83
SNX1-207ENST00000559401 CERKLQ49MI3 558 aaPredicted RBP9.86□□□□□ -0.83
SNX1-207ENST00000559401 B4GALNT3Q6L9W6 998 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 GPAT2Q6NUI2 795 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 PROCA1Q8NCQ7 364 aaPredicted RBP9.86□□□□□ -0.83
SNX1-207ENST00000559401 FSD1Q9BTV5 496 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 EHD4Q9H223 541 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 RWDD1Q9H446 243 aaPredicted RBP9.86□□□□□ -0.83
SNX1-207ENST00000559401 CABP5Q9NP86 173 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 DCP1AQ9NPI6 582 aaPredicted RBP9.86□□□□□ -0.83
SNX1-207ENST00000559401 TMOD4Q9NZQ9 345 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 PNMA3Q9UL41 463 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 AGTPBP1Q9UPW5 1226 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 SLC4A4Q9Y6R1 1079 aa9.86□□□□□ -0.83
SNX1-207ENST00000559401 MGAMO43451 1857 aa9.85□□□□□ -0.83
SNX1-207ENST00000559401 FMNL1O95466 1100 aaPredicted RBP9.85□□□□□ -0.83
SNX1-207ENST00000559401 ZFYP08048 801 aaPredicted RBP9.85□□□□□ -0.83
SNX1-207ENST00000559401 IRX6P78412 446 aaPredicted RBP9.85□□□□□ -0.83
SNX1-207ENST00000559401 JAG1P78504 1218 aa9.85□□□□□ -0.83
SNX1-207ENST00000559401 LACTBP83111 547 aaPredicted RBP9.85□□□□□ -0.83
SNX1-207ENST00000559401 PABPC4Q13310 644 aaKnown RBP eCLIP9.85□□□□□ -0.83
SNX1-207ENST00000559401 RAB3GAP1Q15042 981 aa9.85□□□□□ -0.83
SNX1-207ENST00000559401 ZYXQ15942 572 aaKnown RBP9.85□□□□□ -0.83
SNX1-207ENST00000559401 ABCB5Q2M3G0 1257 aa9.85□□□□□ -0.83
SNX1-207ENST00000559401 TREML2Q5T2D2 321 aa9.85□□□□□ -0.83
SNX1-207ENST00000559401 METTL16Q86W50 562 aaKnown RBP9.85□□□□□ -0.83
SNX1-207ENST00000559401 LNPKQ9C0E8 428 aa9.85□□□□□ -0.83
SNX1-207ENST00000559401 ARHGAP39Q9C0H5 1083 aa9.85□□□□□ -0.83
SNX1-207ENST00000559401 PUS7LQ9H0K6 701 aaKnown RBP9.85□□□□□ -0.83
SNX1-207ENST00000559401 ATP8A2Q9NTI2 1148 aa9.85□□□□□ -0.83
SNX1-207ENST00000559401 GINM1Q9NU53 330 aa9.85□□□□□ -0.83
SNX1-207ENST00000559401 PTPN22Q9Y2R2 807 aa9.85□□□□□ -0.83
SNX1-207ENST00000559401 CYP2D7A0A087X1C5 515 aa9.84□□□□□ -0.83
SNX1-207ENST00000559401 USP17L10C9JJH3 530 aa9.84□□□□□ -0.83
SNX1-207ENST00000559401 RNF113AO15541 343 aaKnown RBP9.84□□□□□ -0.83
SNX1-207ENST00000559401 OSBPP22059 807 aa9.84□□□□□ -0.83
SNX1-207ENST00000559401 SHMT1P34896 483 aa9.84□□□□□ -0.83
SNX1-207ENST00000559401 PSMC4P43686 418 aa9.84□□□□□ -0.83
SNX1-207ENST00000559401 IRX3P78415 501 aaPredicted RBP9.84□□□□□ -0.83
SNX1-207ENST00000559401 EVX2Q03828 476 aa9.84□□□□□ -0.83
SNX1-207ENST00000559401 TATDN1Q6P1N9 297 aa9.84□□□□□ -0.83
SNX1-207ENST00000559401 C17orf99Q6UX52 265 aa9.84□□□□□ -0.83
SNX1-207ENST00000559401 SLC44A5Q8NCS7 719 aa9.84□□□□□ -0.83
SNX1-207ENST00000559401 PI4K2BQ8TCG2 481 aa9.84□□□□□ -0.83
SNX1-207ENST00000559401 APPBP2Q92624 585 aa9.84□□□□□ -0.83
SNX1-207ENST00000559401 WDR18Q9BV38 432 aa9.84□□□□□ -0.83
SNX1-207ENST00000559401 SLC45A1Q9Y2W3 748 aa9.84□□□□□ -0.83
SNX1-207ENST00000559401 ADGRA2Q96PE1 1338 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 C19orf81C9J6K1 198 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 USP17L12C9JPN9 530 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 USP17L21D6R901 530 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 GPAA1O43292 621 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 APPP05067 770 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 TDO2P48775 406 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 BACE1P56817 501 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 CAP1Q01518 475 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 STK11IPQ8N1F8 1099 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 ANKRD13CQ8N6S4 541 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 OSBP2Q969R2 916 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 DYNLL2Q96FJ2 89 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 ARPP21Q9UBL0 812 aaPredicted RBP9.83□□□□□ -0.84
SNX1-207ENST00000559401 SWAP70Q9UH65 585 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 PTCH2Q9Y6C5 1203 aa9.83□□□□□ -0.84
SNX1-207ENST00000559401 MINDY4BA8MYZ0 360 aa9.82□□□□□ -0.84
SNX1-207ENST00000559401 M0R2C6 588 aa9.82□□□□□ -0.84
SNX1-207ENST00000559401 BCRP11274 1271 aa9.82□□□□□ -0.84
SNX1-207ENST00000559401 HOXD10P28358 340 aa9.82□□□□□ -0.84
SNX1-207ENST00000559401 PDE1AP54750 535 aa9.82□□□□□ -0.84
SNX1-207ENST00000559401 FCGRTP55899 365 aa9.82□□□□□ -0.84
SNX1-207ENST00000559401 GABPAQ06546 454 aa9.82□□□□□ -0.84
SNX1-207ENST00000559401 SEPT2Q15019 361 aa9.82□□□□□ -0.84
SNX1-207ENST00000559401 SLC9C1Q4G0N8 1177 aa9.82□□□□□ -0.84
SNX1-207ENST00000559401 SH3D19Q5HYK7 790 aa9.82□□□□□ -0.84
SNX1-207ENST00000559401 USP17L2Q6R6M4 530 aa9.82□□□□□ -0.84
SNX1-207ENST00000559401 TRIM47Q96LD4 638 aa9.82□□□□□ -0.84
SNX1-207ENST00000559401 STRBPQ96SI9 672 aaKnown RBP9.82□□□□□ -0.84
SNX1-207ENST00000559401 ASCC2Q9H1I8 757 aaPredicted RBP9.82□□□□□ -0.84
SNX1-207ENST00000559401 MYPNQ86TC9 1320 aa9.82□□□□□ -0.84
SNX1-207ENST00000559401 SALL3Q9BXA9 1300 aa9.82□□□□□ -0.84
SNX1-207ENST00000559401 TRIM6-TRIM34B2RNG4 842 aa9.81□□□□□ -0.84
SNX1-207ENST00000559401 TNPO2O14787 897 aaKnown RBP9.81□□□□□ -0.84
SNX1-207ENST00000559401 MYCP01106 439 aaPredicted RBP9.81□□□□□ -0.84
SNX1-207ENST00000559401 GNRH1P01148 92 aa9.81□□□□□ -0.84
SNX1-207ENST00000559401 IGHDP01880 384 aa9.81□□□□□ -0.84
SNX1-207ENST00000559401 GNAT2P19087 354 aa9.81□□□□□ -0.84
SNX1-207ENST00000559401 USP14P54578 494 aa9.81□□□□□ -0.84
SNX1-207ENST00000559401 MLLT1Q03111 559 aaPredicted RBP9.81□□□□□ -0.84
SNX1-207ENST00000559401 C12orf60Q5U649 245 aa9.81□□□□□ -0.84
SNX1-207ENST00000559401 CTR9Q6PD62 1173 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 294.8 ms