RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 INCENPQ9NQS7 918 aa17.58■□□□□ 0.4
SNRPA1-207ENST00000559309 SNX14Q9Y5W7 946 aa17.58■□□□□ 0.4
SNRPA1-207ENST00000559309 CTNND1O60716 968 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-207ENST00000559309 CAP2P40123 477 aa17.57■□□□□ 0.4
SNRPA1-207ENST00000559309 ANAPC15P60006 121 aa17.57■□□□□ 0.4
SNRPA1-207ENST00000559309 RNF41Q9H4P4 317 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-207ENST00000559309 FZD1Q9UP38 647 aa17.57■□□□□ 0.4
SNRPA1-207ENST00000559309 PPP1R12BO60237 982 aaPredicted RBP17.56■□□□□ 0.4
SNRPA1-207ENST00000559309 CELF2O95319 508 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-207ENST00000559309 SLC3A2P08195 630 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-207ENST00000559309 GUCY1A2P33402 732 aa17.56■□□□□ 0.4
SNRPA1-207ENST00000559309 NF2P35240 595 aa17.56■□□□□ 0.4
SNRPA1-207ENST00000559309 PDE4BQ07343 736 aa17.56■□□□□ 0.4
SNRPA1-207ENST00000559309 RNF20Q5VTR2 975 aa17.56■□□□□ 0.4
SNRPA1-207ENST00000559309 MB21D2Q8IYB1 491 aaPredicted RBP17.56■□□□□ 0.4
SNRPA1-207ENST00000559309 CCDC17Q96LX7 622 aa17.56■□□□□ 0.4
SNRPA1-207ENST00000559309 KIF2CQ99661 725 aa17.56■□□□□ 0.4
SNRPA1-207ENST00000559309 GBA2Q9HCG7 927 aaPredicted RBP17.56■□□□□ 0.4
SNRPA1-207ENST00000559309 INPP5BP32019 993 aa17.55■□□□□ 0.4
SNRPA1-207ENST00000559309 MAP3K9P80192 1104 aa17.55■□□□□ 0.4
SNRPA1-207ENST00000559309 ADCK5Q3MIX3 580 aa17.55■□□□□ 0.4
SNRPA1-207ENST00000559309 MFSD6Q6ZSS7 791 aa17.55■□□□□ 0.4
SNRPA1-207ENST00000559309 MOB2Q70IA6 237 aa17.55■□□□□ 0.4
SNRPA1-207ENST00000559309 CRACR2BQ8N4Y2 399 aaPredicted RBP17.55■□□□□ 0.4
SNRPA1-207ENST00000559309 NEDD1Q8NHV4 660 aa17.55■□□□□ 0.4
SNRPA1-207ENST00000559309 TM6SF1Q9BZW5 370 aa17.55■□□□□ 0.4
SNRPA1-207ENST00000559309 ZNF287Q9HBT7 754 aa17.55■□□□□ 0.4
SNRPA1-207ENST00000559309 TCP11L1Q9NUJ3 509 aa17.55■□□□□ 0.4
SNRPA1-207ENST00000559309 SNCAIPQ9Y6H5 919 aa17.55■□□□□ 0.4
SNRPA1-207ENST00000559309 PRDM1O75626 825 aa17.54■□□□□ 0.4
SNRPA1-207ENST00000559309 AKR1B1P15121 316 aa17.54■□□□□ 0.4
SNRPA1-207ENST00000559309 IREB2P48200 963 aaKnown RBP17.54■□□□□ 0.4
SNRPA1-207ENST00000559309 SHROOM1Q2M3G4 852 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-207ENST00000559309 CERKLQ49MI3 558 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-207ENST00000559309 SAPCD2Q86UD0 394 aa17.54■□□□□ 0.4
SNRPA1-207ENST00000559309 HHIPL1Q96JK4 782 aa17.54■□□□□ 0.4
SNRPA1-207ENST00000559309 TBC1D32Q96NH3 1257 aa17.54■□□□□ 0.4
SNRPA1-207ENST00000559309 CNNM2Q9H8M5 875 aa17.54■□□□□ 0.4
SNRPA1-207ENST00000559309 TLL2Q9Y6L7 1015 aa17.54■□□□□ 0.4
SNRPA1-207ENST00000559309 CAPN15O75808 1086 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 ANTXR2P58335 489 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 VGLL4Q14135 290 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 KRT32Q14532 448 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 ARMC9Q7Z3E5 817 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 SIAH1Q8IUQ4 282 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 ANKRD13AQ8IZ07 590 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 SCYL3Q8IZE3 742 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 FBXL16Q8N461 479 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 WRNIP1Q96S55 665 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 MTA3Q9BTC8 594 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 KRT23Q9C075 422 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 IL17RBQ9NRM6 502 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 ZBTB21Q9ULJ3 1066 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 ANGEL1Q9UNK9 670 aaKnown RBP17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 PTPRFP10586 1907 aa17.53■□□□□ 0.4
SNRPA1-207ENST00000559309 WDR19Q8NEZ3 1342 aa17.52■□□□□ 0.4
SNRPA1-207ENST00000559309 ZKSCAN1P17029 563 aaPredicted RBP17.52■□□□□ 0.4
SNRPA1-207ENST00000559309 EXOSC10Q01780 885 aaKnown RBP17.52■□□□□ 0.4
SNRPA1-207ENST00000559309 C2orf69Q8N8R5 385 aa17.52■□□□□ 0.4
SNRPA1-207ENST00000559309 ANKS1AQ92625 1134 aa17.52■□□□□ 0.4
SNRPA1-207ENST00000559309 ZKSCAN4Q969J2 545 aaPredicted RBP17.52■□□□□ 0.4
SNRPA1-207ENST00000559309 C22orf23Q9BZE7 217 aa17.52■□□□□ 0.4
SNRPA1-207ENST00000559309 MKNK2Q9HBH9 465 aa17.52■□□□□ 0.4
SNRPA1-207ENST00000559309 ZSWIM6Q9HCJ5 1215 aa17.52■□□□□ 0.4
SNRPA1-207ENST00000559309 ZSWIM5Q9P217 1185 aa17.52■□□□□ 0.4
SNRPA1-207ENST00000559309 TMEM88BA6NKF7 163 aa17.51■□□□□ 0.39
SNRPA1-207ENST00000559309 ASNSP08243 561 aa17.51■□□□□ 0.39
SNRPA1-207ENST00000559309 MCCP23508 829 aa17.51■□□□□ 0.39
SNRPA1-207ENST00000559309 ABCB5Q2M3G0 1257 aa17.51■□□□□ 0.39
SNRPA1-207ENST00000559309 RCSD1Q6JBY9 416 aa17.51■□□□□ 0.39
SNRPA1-207ENST00000559309 TMEM179Q6ZVK1 233 aa17.51■□□□□ 0.39
SNRPA1-207ENST00000559309 CYB5R4Q7L1T6 521 aa17.51■□□□□ 0.39
SNRPA1-207ENST00000559309 NCOA7Q8NI08 942 aa17.51■□□□□ 0.39
SNRPA1-207ENST00000559309 ESR2Q92731 530 aa17.51■□□□□ 0.39
SNRPA1-207ENST00000559309 CLMNQ96JQ2 1002 aa17.51■□□□□ 0.39
SNRPA1-207ENST00000559309 AGXT2Q9BYV1 514 aa17.51■□□□□ 0.39
SNRPA1-207ENST00000559309 SPDYE5A6NIY4 337 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 B4E1Z4 1266 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 UBE2Q2LH0YL09 131 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 KDM4AO75164 1064 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 GDF11O95390 407 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 GH2P01242 217 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 PTPRAP18433 802 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 TFAP4Q01664 338 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 SEC23AQ15436 765 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 ZNF444Q8N0Y2 327 aaPredicted RBP17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 STK11IPQ8N1F8 1099 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 MKL1Q969V6 931 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 NEK1Q96PY6 1258 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 WDR18Q9BV38 432 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 TRIM34Q9BYJ4 488 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 PRDM10Q9NQV6 1147 aa17.5■□□□□ 0.39
SNRPA1-207ENST00000559309 FOXN1O15353 648 aa17.49■□□□□ 0.39
SNRPA1-207ENST00000559309 VEGFBP49765 207 aa17.49■□□□□ 0.39
SNRPA1-207ENST00000559309 PRKG1Q13976 671 aa17.49■□□□□ 0.39
SNRPA1-207ENST00000559309 FAM47AQ5JRC9 791 aa17.49■□□□□ 0.39
SNRPA1-207ENST00000559309 IGDCC4Q8TDY8 1250 aa17.49■□□□□ 0.39
SNRPA1-207ENST00000559309 TBC1D2Q9BYX2 928 aa17.49■□□□□ 0.39
SNRPA1-207ENST00000559309 ALDH8A1Q9H2A2 487 aaPredicted RBP17.49■□□□□ 0.39
SNRPA1-207ENST00000559309 ZNF408Q9H9D4 720 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms