RNA–Protein interactions for RNA: ENST00000559212.1

PCAT29-203, prostate cancer associated transcript 29, humanhuman

TSL 3 BASIC

Gene PCAT29, Length 647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-203ENST00000559212 GDF11O95390 407 aa12.92□□□□□ -0.34
PCAT29-203ENST00000559212 METTL16Q86W50 562 aaKnown RBP12.92□□□□□ -0.34
PCAT29-203ENST00000559212 CERS3Q8IU89 383 aa12.92□□□□□ -0.34
PCAT29-203ENST00000559212 EAF2Q96CJ1 260 aaPredicted RBP12.92□□□□□ -0.34
PCAT29-203ENST00000559212 DEFB118Q96PH6 123 aa12.92□□□□□ -0.34
PCAT29-203ENST00000559212 SAP30BPQ9UHR5 308 aaKnown RBP12.92□□□□□ -0.34
PCAT29-203ENST00000559212 NR2E3Q9Y5X4 410 aa12.92□□□□□ -0.34
PCAT29-203ENST00000559212 MYH1P12882 1939 aa12.92□□□□□ -0.34
PCAT29-203ENST00000559212 USP17L10C9JJH3 530 aa12.91□□□□□ -0.34
PCAT29-203ENST00000559212 HOXA7P31268 230 aaPredicted RBP12.91□□□□□ -0.34
PCAT29-203ENST00000559212 USP5P45974 858 aa12.91□□□□□ -0.34
PCAT29-203ENST00000559212 JAG1P78504 1218 aa12.91□□□□□ -0.34
PCAT29-203ENST00000559212 CEP85Q6P2H3 762 aa12.91□□□□□ -0.34
PCAT29-203ENST00000559212 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
PCAT29-203ENST00000559212 ERC1Q8IUD2 1116 aa12.91□□□□□ -0.34
PCAT29-203ENST00000559212 MIER1Q8N108 512 aa12.91□□□□□ -0.34
PCAT29-203ENST00000559212 MIGA1Q8NAN2 632 aa12.91□□□□□ -0.34
PCAT29-203ENST00000559212 PAK6Q9NQU5 681 aaPredicted RBP12.91□□□□□ -0.34
PCAT29-203ENST00000559212 MORF4L1Q9UBU8 362 aa12.91□□□□□ -0.34
PCAT29-203ENST00000559212 ZBTB21Q9ULJ3 1066 aa12.91□□□□□ -0.34
PCAT29-203ENST00000559212 DOCK3Q8IZD9 2030 aa12.9□□□□□ -0.34
PCAT29-203ENST00000559212 HMGCRP04035 888 aa12.9□□□□□ -0.34
PCAT29-203ENST00000559212 MAP3K12Q12852 859 aa12.9□□□□□ -0.34
PCAT29-203ENST00000559212 SHROOM1Q2M3G4 852 aaPredicted RBP12.9□□□□□ -0.34
PCAT29-203ENST00000559212 MAGEB6Q8N7X4 407 aa12.9□□□□□ -0.34
PCAT29-203ENST00000559212 P2RX7Q99572 595 aaKnown RBP12.9□□□□□ -0.34
PCAT29-203ENST00000559212 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.9□□□□□ -0.34
PCAT29-203ENST00000559212 GJD2Q9UKL4 321 aa12.9□□□□□ -0.34
PCAT29-203ENST00000559212 EXOC6BQ9Y2D4 811 aa12.9□□□□□ -0.34
PCAT29-203ENST00000559212 NDUFB9Q9Y6M9 179 aa12.9□□□□□ -0.34
PCAT29-203ENST00000559212 HERVK_113P62684 666 aa12.89□□□□□ -0.35
PCAT29-203ENST00000559212 HSP90AB4PQ58FF6 505 aa12.89□□□□□ -0.35
PCAT29-203ENST00000559212 TMED8Q6PL24 325 aaPredicted RBP12.89□□□□□ -0.35
PCAT29-203ENST00000559212 AACSQ86V21 672 aa12.89□□□□□ -0.35
PCAT29-203ENST00000559212 GPRC5AQ8NFJ5 357 aa12.89□□□□□ -0.35
PCAT29-203ENST00000559212 CRISPLD2Q9H0B8 497 aa12.89□□□□□ -0.35
PCAT29-203ENST00000559212 ANTXR1Q9H6X2 564 aa12.89□□□□□ -0.35
PCAT29-203ENST00000559212 PLXNB2O15031 1838 aa12.88□□□□□ -0.35
PCAT29-203ENST00000559212 EVI5O60447 810 aa12.88□□□□□ -0.35
PCAT29-203ENST00000559212 GH2P01242 217 aa12.88□□□□□ -0.35
PCAT29-203ENST00000559212 USP17L2Q6R6M4 530 aa12.88□□□□□ -0.35
PCAT29-203ENST00000559212 PANK1Q8TE04 598 aa12.88□□□□□ -0.35
PCAT29-203ENST00000559212 GTF3C2Q8WUA4 911 aaPredicted RBP12.88□□□□□ -0.35
PCAT29-203ENST00000559212 HMX1Q9NP08 348 aaPredicted RBP12.88□□□□□ -0.35
PCAT29-203ENST00000559212 RBM27Q9P2N5 1060 aaKnown RBP12.88□□□□□ -0.35
PCAT29-203ENST00000559212 ZBED9Q6R2W3 1325 aa12.88□□□□□ -0.35
PCAT29-203ENST00000559212 RPTORQ8N122 1335 aa12.88□□□□□ -0.35
PCAT29-203ENST00000559212 MS4A1P11836 297 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 CYP2B6P20813 491 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 MAPK4P31152 587 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 ERVK-9P63128 1117 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 ERVK-24P63145 666 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 TRIM32Q13049 653 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 PDE3AQ14432 1141 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 TTF1Q15361 905 aaPredicted RBP12.87□□□□□ -0.35
PCAT29-203ENST00000559212 TATDN1Q6P1N9 297 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 NECAB2Q7Z6G3 386 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 TTC6Q86TZ1 520 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 CCAR1Q8IX12 1150 aaKnown RBP12.87□□□□□ -0.35
PCAT29-203ENST00000559212 ANKLE1Q8NAG6 615 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 RHPN1Q8TCX5 695 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 SOCS4Q8WXH5 440 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 PAWRQ96IZ0 340 aaKnown RBP12.87□□□□□ -0.35
PCAT29-203ENST00000559212 FEZ1Q99689 392 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 NUDT12Q9BQG2 462 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 PAGR1Q9BTK6 254 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 EHD4Q9H223 541 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 TXNRD2Q9NNW7 524 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 IL1RAPL2Q9NP60 686 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 EMILIN3Q9NT22 766 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 SERPINB13Q9UIV8 391 aa12.87□□□□□ -0.35
PCAT29-203ENST00000559212 PEX10O60683 326 aa12.86□□□□□ -0.35
PCAT29-203ENST00000559212 RAB3GAP1Q15042 981 aa12.86□□□□□ -0.35
PCAT29-203ENST00000559212 ZYXQ15942 572 aaKnown RBP12.86□□□□□ -0.35
PCAT29-203ENST00000559212 CERKLQ49MI3 558 aaPredicted RBP12.86□□□□□ -0.35
PCAT29-203ENST00000559212 DIEXFQ68CQ4 756 aaKnown RBP12.86□□□□□ -0.35
PCAT29-203ENST00000559212 TRIB2Q92519 343 aa12.86□□□□□ -0.35
PCAT29-203ENST00000559212 C12orf42Q96LP6 360 aa12.86□□□□□ -0.35
PCAT29-203ENST00000559212 CWC22Q9HCG8 908 aaKnown RBP12.86□□□□□ -0.35
PCAT29-203ENST00000559212 CABP5Q9NP86 173 aa12.86□□□□□ -0.35
PCAT29-203ENST00000559212 RBPJLQ9UBG7 517 aa12.86□□□□□ -0.35
PCAT29-203ENST00000559212 NAV1Q8NEY1 1877 aa12.85□□□□□ -0.35
PCAT29-203ENST00000559212 MAGEB6P1A0A0J9YX57 407 aa12.85□□□□□ -0.35
PCAT29-203ENST00000559212 USP17L15C9J2P7 530 aa12.85□□□□□ -0.35
PCAT29-203ENST00000559212 USP17L13C9JLJ4 530 aa12.85□□□□□ -0.35
PCAT29-203ENST00000559212 USP17L11C9JVI0 530 aa12.85□□□□□ -0.35
PCAT29-203ENST00000559212 USP17L18D6R9N7 530 aa12.85□□□□□ -0.35
PCAT29-203ENST00000559212 USP17L22D6RA61 530 aa12.85□□□□□ -0.35
PCAT29-203ENST00000559212 USP17L17D6RBQ6 530 aa12.85□□□□□ -0.35
PCAT29-203ENST00000559212 USP17L19D6RCP7 530 aa12.85□□□□□ -0.35
PCAT29-203ENST00000559212 USP17L20D6RJB6 530 aa12.85□□□□□ -0.35
PCAT29-203ENST00000559212 POLR3DP05423 398 aaPredicted RBP12.85□□□□□ -0.35
PCAT29-203ENST00000559212 XRCC5P13010 732 aaKnown RBP12.85□□□□□ -0.35
PCAT29-203ENST00000559212 USP14P54578 494 aa12.85□□□□□ -0.35
PCAT29-203ENST00000559212 USP17L24Q0WX57 530 aa12.85□□□□□ -0.35
PCAT29-203ENST00000559212 ABCB5Q2M3G0 1257 aa12.85□□□□□ -0.35
PCAT29-203ENST00000559212 Q3C1V9 767 aa12.85□□□□□ -0.35
PCAT29-203ENST00000559212 TRMT44Q8IYL2 757 aaKnown RBP12.85□□□□□ -0.35
PCAT29-203ENST00000559212 CLASRPQ8N2M8 674 aaKnown RBP12.85□□□□□ -0.35
PCAT29-203ENST00000559212 DIS3LQ8TF46 1054 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms