RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 SYKP43405 635 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 PPP4CP60510 307 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 IQCB1Q15051 598 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 POTEAQ6S8J7 498 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 PLA2G4DQ86XP0 818 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 BPIFA3Q9BQP9 254 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 TNRC6CQ9HCJ0 1690 aaKnown RBP13□□□□□ -0.33
CLPX-204ENST00000559152 BTBD18B2RXH4 712 aa13□□□□□ -0.33
CLPX-204ENST00000559152 WDHD1O75717 1129 aaPredicted RBP13□□□□□ -0.33
CLPX-204ENST00000559152 MARCKSP29966 332 aaPredicted RBP13□□□□□ -0.33
CLPX-204ENST00000559152 USP5P45974 858 aa13□□□□□ -0.33
CLPX-204ENST00000559152 ZNF75DP51815 510 aa13□□□□□ -0.33
CLPX-204ENST00000559152 TROAPQ12815 778 aa13□□□□□ -0.33
CLPX-204ENST00000559152 ELOA2Q8IYF1 753 aaPredicted RBP13□□□□□ -0.33
CLPX-204ENST00000559152 KRI1Q8N9T8 703 aaKnown RBP13□□□□□ -0.33
CLPX-204ENST00000559152 CTCFLQ8NI51 663 aaPredicted RBP13□□□□□ -0.33
CLPX-204ENST00000559152 PIBF1Q8WXW3 757 aa13□□□□□ -0.33
CLPX-204ENST00000559152 BRMS1Q9HCU9 246 aa13□□□□□ -0.33
CLPX-204ENST00000559152 HOOK1Q9UJC3 728 aaKnown RBP13□□□□□ -0.33
CLPX-204ENST00000559152 HPSEQ9Y251 543 aa13□□□□□ -0.33
CLPX-204ENST00000559152 MORC2Q9Y6X9 1032 aaPredicted RBP13□□□□□ -0.33
CLPX-204ENST00000559152 MYH13Q9UKX3 1938 aa13□□□□□ -0.33
CLPX-204ENST00000559152 CYP2D7A0A087X1C5 515 aa13□□□□□ -0.33
CLPX-204ENST00000559152 GUCY1A2P33402 732 aa13□□□□□ -0.33
CLPX-204ENST00000559152 TPM4P67936 248 aa13□□□□□ -0.33
CLPX-204ENST00000559152 RESP18Q5W5W9 173 aa13□□□□□ -0.33
CLPX-204ENST00000559152 SLF2Q8IX21 1173 aa13□□□□□ -0.33
CLPX-204ENST00000559152 ZNF287Q9HBT7 754 aa13□□□□□ -0.33
CLPX-204ENST00000559152 MCM9Q9NXL9 1143 aa13□□□□□ -0.33
CLPX-204ENST00000559152 GGA1Q9UJY5 639 aa13□□□□□ -0.33
CLPX-204ENST00000559152 TSPY2A6NKD2 308 aa12.99□□□□□ -0.33
CLPX-204ENST00000559152 PRDM1O75626 825 aa12.99□□□□□ -0.33
CLPX-204ENST00000559152 HOXA10P31260 410 aaPredicted RBP12.99□□□□□ -0.33
CLPX-204ENST00000559152 KIF5BP33176 963 aa12.99□□□□□ -0.33
CLPX-204ENST00000559152 KRT27Q7Z3Y8 459 aa12.99□□□□□ -0.33
CLPX-204ENST00000559152 DRC7Q8IY82 874 aa12.99□□□□□ -0.33
CLPX-204ENST00000559152 CCDC82Q8N4S0 544 aa12.99□□□□□ -0.33
CLPX-204ENST00000559152 CRAMP1Q96RY5 1269 aa12.99□□□□□ -0.33
CLPX-204ENST00000559152 PODXL2Q9NZ53 605 aa12.99□□□□□ -0.33
CLPX-204ENST00000559152 BMP15O95972 392 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 C11orf57Q6ZUT1 292 aaPredicted RBP12.98□□□□□ -0.33
CLPX-204ENST00000559152 DGKHQ86XP1 1220 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
CLPX-204ENST00000559152 MRFAP1L1Q96HT8 127 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 FAM13BQ9NYF5 915 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 KCNJ14Q9UNX9 436 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 KIAA1551Q9HCM1 1747 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 CCDC88AQ3V6T2 1871 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 UFL1O94874 794 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 IL1R1P14778 569 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 PLCG2P16885 1265 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 KRT2P35908 639 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 NLRP12P59046 1061 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 GPSM2P81274 684 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 C12orf60Q5U649 245 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 SHC4Q6S5L8 630 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 TMTC3Q6ZXV5 915 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 TBC1D22AQ8WUA7 517 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 TAOK2Q9UL54 1235 aa12.98□□□□□ -0.33
CLPX-204ENST00000559152 RXRBP28702 533 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 FUT2Q10981 343 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 CMTR1Q8N1G2 835 aaKnown RBP12.97□□□□□ -0.33
CLPX-204ENST00000559152 SPC24Q8NBT2 197 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 ANKS1AQ92625 1134 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 CCDC34Q96HJ3 373 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 PHF20Q9BVI0 1012 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 TTC12Q9H892 705 aaPredicted RBP12.97□□□□□ -0.33
CLPX-204ENST00000559152 CD209Q9NNX6 404 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 MKRN1Q9UHC7 482 aaKnown RBP12.97□□□□□ -0.33
CLPX-204ENST00000559152 V9GY48 417 aaPredicted RBP12.97□□□□□ -0.33
CLPX-204ENST00000559152 ROBO3Q96MS0 1386 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 MROH7-TTC4A0A0A0MT08 1334 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 KLRG2A4D1S0 409 aaPredicted RBP12.97□□□□□ -0.33
CLPX-204ENST00000559152 SMTNL1A8MU46 457 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 UBE2Q2LH0YL09 131 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 TPM2P07951 284 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 PTPREP23469 700 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 DHX40Q8IX18 779 aaKnown RBP12.97□□□□□ -0.33
CLPX-204ENST00000559152 KAT14Q9H8E8 782 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 KCNH3Q9ULD8 1083 aa12.97□□□□□ -0.33
CLPX-204ENST00000559152 ECM29Q5VYK3 1845 aa12.96□□□□□ -0.33
CLPX-204ENST00000559152 GNAQP50148 359 aa12.96□□□□□ -0.33
CLPX-204ENST00000559152 TOB1P50616 345 aaPredicted RBP12.96□□□□□ -0.33
CLPX-204ENST00000559152 NOLC1Q14978 699 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLPX-204ENST00000559152 PKN1Q16512 942 aa12.96□□□□□ -0.33
CLPX-204ENST00000559152 KANK3Q6NY19 840 aa12.96□□□□□ -0.33
CLPX-204ENST00000559152 MKNK2Q9HBH9 465 aa12.96□□□□□ -0.33
CLPX-204ENST00000559152 TCP11L1Q9NUJ3 509 aa12.96□□□□□ -0.33
CLPX-204ENST00000559152 TUBE1Q9UJT0 475 aa12.96□□□□□ -0.33
CLPX-204ENST00000559152 JAG2Q9Y219 1238 aa12.96□□□□□ -0.33
CLPX-204ENST00000559152 SRPRBQ9Y5M8 271 aaKnown RBP12.96□□□□□ -0.33
CLPX-204ENST00000559152 UBR3Q6ZT12 1888 aa12.96□□□□□ -0.33
CLPX-204ENST00000559152 LAMB1P07942 1786 aa12.96□□□□□ -0.34
CLPX-204ENST00000559152 DLEC1Q9Y238 1755 aa12.96□□□□□ -0.34
CLPX-204ENST00000559152 SMIM22K7EJ46 135 aa12.96□□□□□ -0.34
CLPX-204ENST00000559152 FAM47AQ5JRC9 791 aa12.96□□□□□ -0.34
CLPX-204ENST00000559152 ZNF444Q8N0Y2 327 aaPredicted RBP12.96□□□□□ -0.34
CLPX-204ENST00000559152 SH3RF3Q8TEJ3 882 aaPredicted RBP12.96□□□□□ -0.34
CLPX-204ENST00000559152 FAM163AQ96GL9 167 aaPredicted RBP12.96□□□□□ -0.34
CLPX-204ENST00000559152 ZNF830Q96NB3 372 aaPredicted RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms