RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 GGA1Q9UJY5 639 aa3.2□□□□□ -1.9
GABPB1-209ENST00000559100 PCDHB10Q9UN67 800 aa3.2□□□□□ -1.9
GABPB1-209ENST00000559100 CORINQ9Y5Q5 1042 aa3.2□□□□□ -1.9
GABPB1-209ENST00000559100 IQCA1LA6NCM1 817 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 FSCN2O14926 492 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 LILRB5O75023 590 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 ECEL1O95672 775 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 PGRP06401 933 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 SLFN14P0C7P3 912 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 HCLS1P14317 486 aaPredicted RBP3.19□□□□□ -1.9
GABPB1-209ENST00000559100 LIG1P18858 919 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 GRK4P32298 578 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 YARSP54577 528 aaKnown RBP3.19□□□□□ -1.9
GABPB1-209ENST00000559100 SLC7A5Q01650 507 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 SQSTM1Q13501 440 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 INPP5AQ14642 412 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 TKFCQ3LXA3 575 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 GNPTABQ3T906 1256 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 SV2CQ496J9 727 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 UNC5AQ6ZN44 842 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 NLRC3Q7RTR2 1065 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 FCHSD1Q86WN1 690 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 C12orf40Q86WS4 652 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 ZSWIM2Q8NEG5 633 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 ST13P5Q8NFI4 369 aaPredicted RBP3.19□□□□□ -1.9
GABPB1-209ENST00000559100 KRTAP9-3Q9BYQ3 159 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 BRINP2Q9C0B6 783 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 TMX1Q9H3N1 280 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 SOX17Q9H6I2 414 aaPredicted RBP3.19□□□□□ -1.9
GABPB1-209ENST00000559100 PHAXQ9H814 394 aaKnown RBP3.19□□□□□ -1.9
GABPB1-209ENST00000559100 KRT82Q9NSB4 513 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 TMEM260Q9NX78 707 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 KLHL42Q9P2K6 505 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 LRP2BPQ9P2M1 347 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 KLF15Q9UIH9 416 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 ZMYM5Q9UJ78 669 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 CD2APQ9Y5K6 639 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 PTCH2Q9Y6C5 1203 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 SNCAIPQ9Y6H5 919 aa3.19□□□□□ -1.9
GABPB1-209ENST00000559100 SLC22A31A6NKX4 558 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 M0R082 166 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 GFRA2O00451 464 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 S100BP04271 92 aaPredicted RBP3.18□□□□□ -1.9
GABPB1-209ENST00000559100 TP53P04637 393 aaPredicted RBP3.18□□□□□ -1.9
GABPB1-209ENST00000559100 NME1P15531 152 aaKnown RBP3.18□□□□□ -1.9
GABPB1-209ENST00000559100 AMPD1P23109 780 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 SNRPNP63162 240 aaKnown RBP3.18□□□□□ -1.9
GABPB1-209ENST00000559100 ZYXQ15942 572 aaKnown RBP3.18□□□□□ -1.9
GABPB1-209ENST00000559100 PRSS36Q5K4E3 855 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 KIAA0907Q7Z7F0 614 aaPredicted RBP3.18□□□□□ -1.9
GABPB1-209ENST00000559100 LRRC47Q8N1G4 583 aaKnown RBP3.18□□□□□ -1.9
GABPB1-209ENST00000559100 GOLGA6L1Q8N7Z2 621 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 PRPF38AQ8NAV1 312 aaKnown RBP3.18□□□□□ -1.9
GABPB1-209ENST00000559100 FAM13CQ8NE31 585 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 ZNF417Q8TAU3 575 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 TTC9Q92623 222 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 WNT8BQ93098 351 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 ATG4CQ96DT6 458 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 SLC26A8Q96RN1 970 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 ZNF587Q96SQ5 575 aaPredicted RBP3.18□□□□□ -1.9
GABPB1-209ENST00000559100 CEP89Q96ST8 783 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 CDC6Q99741 560 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 SPATA9Q9BWV2 254 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 SSU72Q9NP77 194 aaKnown RBP3.18□□□□□ -1.9
GABPB1-209ENST00000559100 MBIPQ9NS73 344 aa3.18□□□□□ -1.9
GABPB1-209ENST00000559100 ARID4BQ4LE39 1312 aaPredicted RBP3.18□□□□□ -1.9
GABPB1-209ENST00000559100 IGF1RP08069 1367 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 MEIS3P2A8K0S8 358 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 DYRK3O43781 588 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 SUSD5O60279 629 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 ZNF862O60290 1169 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 PSPNO60542 156 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 ALBP02768 609 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 FAM153BP0C7A2 387 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 ACRP10323 421 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 NAT2P11245 290 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 BCRP11274 1271 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 MYCLP1P12525 358 aaPredicted RBP3.17□□□□□ -1.9
GABPB1-209ENST00000559100 POLR2BP30876 1174 aaKnown RBP3.17□□□□□ -1.9
GABPB1-209ENST00000559100 GBP1P32455 592 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 MASP1P48740 699 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 AFF1P51825 1210 aaKnown RBP3.17□□□□□ -1.9
GABPB1-209ENST00000559100 BBS9Q3SYG4 887 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 AKAP4Q5JQC9 854 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 PPM1JQ5JR12 505 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 NKAPLQ5M9Q1 402 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 AXDND1Q5T1B0 1012 aaPredicted RBP3.17□□□□□ -1.9
GABPB1-209ENST00000559100 MRM1Q6IN84 353 aaKnown RBP3.17□□□□□ -1.9
GABPB1-209ENST00000559100 C8orf86Q6ZUL3 223 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 CDC37L1Q7L3B6 337 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 DHX37Q8IY37 1157 aaKnown RBP3.17□□□□□ -1.9
GABPB1-209ENST00000559100 SYNPOQ8N3V7 929 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 TAB3Q8N5C8 712 aaPredicted RBP3.17□□□□□ -1.9
GABPB1-209ENST00000559100 KLHL23Q8NBE8 558 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 WDR89Q96FK6 387 aaPredicted RBP3.17□□□□□ -1.9
GABPB1-209ENST00000559100 KLHDC7BQ96G42 594 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 DHRS1Q96LJ7 313 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 SLC9A7Q96T83 725 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 CHMP4AQ9BY43 222 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 OSGEPQ9NPF4 335 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms