RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 CTSWP56202 376 aa4.96□□□□□ -1.62
LRRC28-212ENST00000558911 CIAPIN1Q6FI81 312 aa4.96□□□□□ -1.62
LRRC28-212ENST00000558911 PI16Q6UXB8 463 aa4.96□□□□□ -1.62
LRRC28-212ENST00000558911 TXNDC2Q86VQ3 553 aa4.96□□□□□ -1.62
LRRC28-212ENST00000558911 POLR3GLQ9BT43 218 aa4.96□□□□□ -1.62
LRRC28-212ENST00000558911 FOXQ1Q9C009 403 aa4.96□□□□□ -1.62
LRRC28-212ENST00000558911 GNEQ9Y223 722 aaKnown RBP4.96□□□□□ -1.62
LRRC28-212ENST00000558911 MED1Q15648 1581 aaPredicted RBP4.95□□□□□ -1.62
LRRC28-212ENST00000558911 PRR33A8MZF0 331 aa4.95□□□□□ -1.62
LRRC28-212ENST00000558911 EOMESO95936 686 aa4.95□□□□□ -1.62
LRRC28-212ENST00000558911 KCNA10Q16322 511 aa4.95□□□□□ -1.62
LRRC28-212ENST00000558911 GRIN3AQ8TCU5 1115 aa4.95□□□□□ -1.62
LRRC28-212ENST00000558911 KCNN1Q92952 543 aa4.95□□□□□ -1.62
LRRC28-212ENST00000558911 EMILIN2Q9BXX0 1053 aa4.95□□□□□ -1.62
LRRC28-212ENST00000558911 EPB41L4BQ9H329 900 aa4.95□□□□□ -1.62
LRRC28-212ENST00000558911 C19orf73Q9NVV2 129 aa4.95□□□□□ -1.62
LRRC28-212ENST00000558911 NLRP2Q9NX02 1062 aa4.95□□□□□ -1.62
LRRC28-212ENST00000558911 RBAK-RBAKDNI3L0D1 243 aa4.94□□□□□ -1.62
LRRC28-212ENST00000558911 GPR182O15218 404 aa4.94□□□□□ -1.62
LRRC28-212ENST00000558911 SMARCA5O60264 1052 aaPredicted RBP4.94□□□□□ -1.62
LRRC28-212ENST00000558911 NUAK1O60285 661 aa4.94□□□□□ -1.62
LRRC28-212ENST00000558911 NME2P22392 152 aa4.94□□□□□ -1.62
LRRC28-212ENST00000558911 GDNFP39905 211 aa4.94□□□□□ -1.62
LRRC28-212ENST00000558911 FGD1P98174 961 aa4.94□□□□□ -1.62
LRRC28-212ENST00000558911 DRC1Q96MC2 740 aa4.94□□□□□ -1.62
LRRC28-212ENST00000558911 FAM129BQ96TA1 746 aa4.94□□□□□ -1.62
LRRC28-212ENST00000558911 DNAJC25Q9H1X3 360 aa4.94□□□□□ -1.62
LRRC28-212ENST00000558911 SEMA3GQ9NS98 782 aa4.94□□□□□ -1.62
LRRC28-212ENST00000558911 SLAMF8Q9P0V8 285 aa4.94□□□□□ -1.62
LRRC28-212ENST00000558911 ETV2O00321 342 aaPredicted RBP4.93□□□□□ -1.62
LRRC28-212ENST00000558911 CBX7O95931 251 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 ZNF16P17020 682 aaPredicted RBP4.93□□□□□ -1.62
LRRC28-212ENST00000558911 TPTE2Q6XPS3 522 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 ARMCX6Q7L4S7 300 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 PKD1L2Q7Z442 2459 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 TTC6Q86TZ1 520 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 NPAS4Q8IUM7 802 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 ABHD4Q8TB40 342 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 ELMO3Q96BJ8 720 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 CSRNP1Q96S65 589 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 MIPEPQ99797 713 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 BCO2Q9BYV7 579 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 IRF2BPLQ9H1B7 796 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 ZSWIM5Q9P217 1185 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 PCDHA4Q9UN74 947 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 SMG5Q9UPR3 1016 aaKnown RBP4.93□□□□□ -1.62
LRRC28-212ENST00000558911 CNTNAP4Q9C0A0 1308 aa4.93□□□□□ -1.62
LRRC28-212ENST00000558911 PRAMEF27A3QJZ7 478 aa4.92□□□□□ -1.62
LRRC28-212ENST00000558911 RAC2P15153 192 aa4.92□□□□□ -1.62
LRRC28-212ENST00000558911 TCF3P15923 654 aa4.92□□□□□ -1.62
LRRC28-212ENST00000558911 HK2P52789 917 aa4.92□□□□□ -1.62
LRRC28-212ENST00000558911 ERVFC1P60507 584 aa4.92□□□□□ -1.62
LRRC28-212ENST00000558911 ARHGAP4P98171 946 aa4.92□□□□□ -1.62
LRRC28-212ENST00000558911 SFRP5Q5T4F7 317 aa4.92□□□□□ -1.62
LRRC28-212ENST00000558911 NXPE4Q6UWF7 544 aa4.92□□□□□ -1.62
LRRC28-212ENST00000558911 DNAJC14Q6Y2X3 702 aaPredicted RBP4.92□□□□□ -1.62
LRRC28-212ENST00000558911 MFSD4AQ8N468 514 aa4.92□□□□□ -1.62
LRRC28-212ENST00000558911 UBE2FQ969M7 185 aa4.92□□□□□ -1.62
LRRC28-212ENST00000558911 PPP1R1BQ9UD71 204 aaPredicted RBP4.92□□□□□ -1.62
LRRC28-212ENST00000558911 EGFL7Q9UHF1 273 aa4.92□□□□□ -1.62
LRRC28-212ENST00000558911 MAPK8IP1Q9UQF2 711 aa4.92□□□□□ -1.62
LRRC28-212ENST00000558911 FBXO24O75426 580 aa4.91□□□□□ -1.62
LRRC28-212ENST00000558911 SLITRK5O94991 958 aa4.91□□□□□ -1.62
LRRC28-212ENST00000558911 HOXA5P20719 270 aa4.91□□□□□ -1.62
LRRC28-212ENST00000558911 CANXP27824 592 aaKnown RBP4.91□□□□□ -1.62
LRRC28-212ENST00000558911 NTF4P34130 210 aa4.91□□□□□ -1.62
LRRC28-212ENST00000558911 ZNF252P-AS1Q0IIN9 211 aa4.91□□□□□ -1.62
LRRC28-212ENST00000558911 ZBTB37Q5TC79 503 aa4.91□□□□□ -1.62
LRRC28-212ENST00000558911 XAGE3Q8WTP9 111 aa4.91□□□□□ -1.62
LRRC28-212ENST00000558911 ALPK1Q96QP1 1244 aa4.91□□□□□ -1.62
LRRC28-212ENST00000558911 BCL2L13Q9BXK5 485 aa4.91□□□□□ -1.62
LRRC28-212ENST00000558911 CD320Q9NPF0 282 aa4.91□□□□□ -1.62
LRRC28-212ENST00000558911 FANCGO15287 622 aa4.9□□□□□ -1.63
LRRC28-212ENST00000558911 LRIG2O94898 1065 aa4.9□□□□□ -1.63
LRRC28-212ENST00000558911 BMP7P18075 431 aa4.9□□□□□ -1.63
LRRC28-212ENST00000558911 ERCC3P19447 782 aa4.9□□□□□ -1.63
LRRC28-212ENST00000558911 LINC00310P59036 64 aa4.9□□□□□ -1.63
LRRC28-212ENST00000558911 RALGPS1Q5JS13 557 aa4.9□□□□□ -1.63
LRRC28-212ENST00000558911 CYB5RLQ6IPT4 315 aa4.9□□□□□ -1.63
LRRC28-212ENST00000558911 B4GALNT3Q6L9W6 998 aa4.9□□□□□ -1.63
LRRC28-212ENST00000558911 AMIGO3Q86WK7 504 aa4.9□□□□□ -1.63
LRRC28-212ENST00000558911 DHX37Q8IY37 1157 aaKnown RBP4.9□□□□□ -1.63
LRRC28-212ENST00000558911 GIPC2Q8TF65 315 aa4.9□□□□□ -1.63
LRRC28-212ENST00000558911 SREK1Q8WXA9 508 aaKnown RBP4.9□□□□□ -1.63
LRRC28-212ENST00000558911 SPATA32Q96LK8 384 aa4.9□□□□□ -1.63
LRRC28-212ENST00000558911 CWC22Q9HCG8 908 aaKnown RBP4.9□□□□□ -1.63
LRRC28-212ENST00000558911 ARHGEF11O15085 1522 aa4.9□□□□□ -1.63
LRRC28-212ENST00000558911 DNAJC25-GNG10A0A024R161 153 aa4.89□□□□□ -1.63
LRRC28-212ENST00000558911 PAGE1O75459 146 aa4.89□□□□□ -1.63
LRRC28-212ENST00000558911 XRCC5P13010 732 aaKnown RBP4.89□□□□□ -1.63
LRRC28-212ENST00000558911 TRHRP34981 398 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-212ENST00000558911 KCT2Q8NC54 265 aa4.89□□□□□ -1.63
LRRC28-212ENST00000558911 RIN3Q8TB24 985 aa4.89□□□□□ -1.63
LRRC28-212ENST00000558911 ZNF507Q8TCN5 953 aa4.89□□□□□ -1.63
LRRC28-212ENST00000558911 MYLIPQ8WY64 445 aa4.89□□□□□ -1.63
LRRC28-212ENST00000558911 RELTQ969Z4 430 aa4.89□□□□□ -1.63
LRRC28-212ENST00000558911 CCDC120Q96HB5 630 aa4.89□□□□□ -1.63
LRRC28-212ENST00000558911 C20orf173Q96LM9 149 aa4.89□□□□□ -1.63
LRRC28-212ENST00000558911 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
LRRC28-212ENST00000558911 FBRSQ9HAH7 460 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms