RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 ANTXR1Q9H6X2 564 aa8.87□□□□□ -0.99
TRAF3-206ENST00000558880 DBNDD1Q9H9R9 158 aa8.87□□□□□ -0.99
TRAF3-206ENST00000558880 PASKQ96RG2 1323 aa8.86□□□□□ -0.99
TRAF3-206ENST00000558880 WDR33Q9C0J8 1336 aaKnown RBP8.86□□□□□ -0.99
TRAF3-206ENST00000558880 ARAP2Q8WZ64 1704 aa8.86□□□□□ -0.99
TRAF3-206ENST00000558880 CACNA1SQ13698 1873 aa8.86□□□□□ -0.99
TRAF3-206ENST00000558880 MAGEB6P1A0A0J9YX57 407 aa8.86□□□□□ -0.99
TRAF3-206ENST00000558880 FZD9O00144 591 aa8.86□□□□□ -0.99
TRAF3-206ENST00000558880 SIAH2O43255 324 aa8.86□□□□□ -0.99
TRAF3-206ENST00000558880 DGAT1O75907 488 aa8.86□□□□□ -0.99
TRAF3-206ENST00000558880 CYP2E1P05181 493 aaPredicted RBP8.86□□□□□ -0.99
TRAF3-206ENST00000558880 IFIT1P09914 478 aaKnown RBP8.86□□□□□ -0.99
TRAF3-206ENST00000558880 SMPD1P17405 629 aa8.86□□□□□ -0.99
TRAF3-206ENST00000558880 MX1P20591 662 aa8.86□□□□□ -0.99
TRAF3-206ENST00000558880 LDHDQ86WU2 507 aa8.86□□□□□ -0.99
TRAF3-206ENST00000558880 ARMC2Q8NEN0 867 aa8.86□□□□□ -0.99
TRAF3-206ENST00000558880 COA1Q9GZY4 146 aa8.86□□□□□ -0.99
TRAF3-206ENST00000558880 VPS33BQ9H267 617 aa8.86□□□□□ -0.99
TRAF3-206ENST00000558880 ECHDC1Q9NTX5 307 aa8.86□□□□□ -0.99
TRAF3-206ENST00000558880 IQSEC3Q9UPP2 1182 aaPredicted RBP8.86□□□□□ -0.99
TRAF3-206ENST00000558880 FAM205AQ6ZU69 1335 aa8.85□□□□□ -0.99
TRAF3-206ENST00000558880 ZNF646O15015 1829 aaPredicted RBP8.85□□□□□ -0.99
TRAF3-206ENST00000558880 PPIP5K2O43314 1243 aa8.85□□□□□ -0.99
TRAF3-206ENST00000558880 ECE2O60344 883 aa8.85□□□□□ -0.99
TRAF3-206ENST00000558880 ZAP70P43403 619 aa8.85□□□□□ -0.99
TRAF3-206ENST00000558880 SLFNL1Q499Z3 407 aa8.85□□□□□ -0.99
TRAF3-206ENST00000558880 DACT2Q5SW24 774 aa8.85□□□□□ -0.99
TRAF3-206ENST00000558880 GMLQ99445 158 aa8.85□□□□□ -0.99
TRAF3-206ENST00000558880 HAUS7Q99871 368 aa8.85□□□□□ -0.99
TRAF3-206ENST00000558880 ZC3H12CQ9C0D7 883 aaKnown RBP8.85□□□□□ -0.99
TRAF3-206ENST00000558880 BOLA2Q9H3K6 86 aa8.85□□□□□ -0.99
TRAF3-206ENST00000558880 PIH1D3Q9NQM4 214 aaKnown RBP8.85□□□□□ -0.99
TRAF3-206ENST00000558880 SNRKQ9NRH2 765 aa8.85□□□□□ -0.99
TRAF3-206ENST00000558880 FKBPLQ9UIM3 349 aa8.85□□□□□ -0.99
TRAF3-206ENST00000558880 JAG2Q9Y219 1238 aa8.85□□□□□ -0.99
TRAF3-206ENST00000558880 SCN9AQ15858 1988 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 AOX1Q06278 1338 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 PDS5AQ29RF7 1337 aaKnown RBP8.84□□□□□ -0.99
TRAF3-206ENST00000558880 TTC41PQ6P2S7 1318 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 ZNF541Q9H0D2 1346 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 DICER1Q9UPY3 1922 aaKnown RBP8.84□□□□□ -0.99
TRAF3-206ENST00000558880 IQCA1LA6NCM1 817 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 ST8SIA5O15466 376 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 IFIT2P09913 472 aaKnown RBP8.84□□□□□ -0.99
TRAF3-206ENST00000558880 VARSP26640 1264 aaKnown RBP8.84□□□□□ -0.99
TRAF3-206ENST00000558880 KCNJ4P48050 445 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 CXCL9Q07325 125 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 ARID5BQ14865 1188 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 TTC22Q5TAA0 569 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 TBC1D9Q6ZT07 1266 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 PODNQ7Z5L7 613 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 BPHLQ86WA6 291 aaPredicted RBP8.84□□□□□ -0.99
TRAF3-206ENST00000558880 SPATA5Q8NB90 893 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 SUPT20HQ8NEM7 779 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 TRIM34Q9BYJ4 488 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 MCOLN1Q9GZU1 580 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 BCL11AQ9H165 835 aa8.84□□□□□ -0.99
TRAF3-206ENST00000558880 TNRC18O15417 2968 aaPredicted RBP8.84□□□□□ -0.99
TRAF3-206ENST00000558880 SALL1Q9NSC2 1324 aa8.83□□□□□ -1
TRAF3-206ENST00000558880 SHTN1A0MZ66 631 aa8.83□□□□□ -1
TRAF3-206ENST00000558880 RASSF10A6NK89 507 aa8.83□□□□□ -1
TRAF3-206ENST00000558880 MAP4K4O95819 1239 aaPredicted RBP8.83□□□□□ -1
TRAF3-206ENST00000558880 VIL1P09327 827 aaKnown RBP8.83□□□□□ -1
TRAF3-206ENST00000558880 GTF2IP78347 998 aa8.83□□□□□ -1
TRAF3-206ENST00000558880 MAP1SQ66K74 1059 aaPredicted RBP8.83□□□□□ -1
TRAF3-206ENST00000558880 LARGE2Q8N3Y3 721 aa8.83□□□□□ -1
TRAF3-206ENST00000558880 FAM174AQ8TBP5 190 aa8.83□□□□□ -1
TRAF3-206ENST00000558880 EYA3Q99504 573 aa8.83□□□□□ -1
TRAF3-206ENST00000558880 IL25Q9H293 177 aa8.83□□□□□ -1
TRAF3-206ENST00000558880 TAF1DQ9H5J8 278 aaPredicted RBP8.83□□□□□ -1
TRAF3-206ENST00000558880 ZNRF3Q9ULT6 936 aa8.83□□□□□ -1
TRAF3-206ENST00000558880 PDE4DIPQ5VU43 2346 aa8.83□□□□□ -1
TRAF3-206ENST00000558880 AKAP11Q9UKA4 1901 aa8.83□□□□□ -1
TRAF3-206ENST00000558880 TCRBV5S4A2TA0A5A2 114 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 PSMD14O00487 310 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 RAD17O75943 681 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 GLRX3O76003 335 aaKnown RBP8.82□□□□□ -1
TRAF3-206ENST00000558880 UQCRFS1P1P0C7P4 283 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 SDSP20132 328 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 PRDX5P30044 214 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 RGS3P49796 1198 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 CAVIN4Q5BKX8 364 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 CCDC158Q5M9N0 1113 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 TTC39AQ5SRH9 613 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 STRIP1Q5VSL9 837 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 SH3BP5LQ7L8J4 393 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 ZNF804AQ7Z570 1209 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 ADGRA1Q86SQ6 560 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 HPS1Q92902 700 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 PCDHAC2Q9Y5I4 1007 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 WASF2Q9Y6W5 498 aa8.82□□□□□ -1
TRAF3-206ENST00000558880 CASP8AP2Q9UKL3 1982 aa8.81□□□□□ -1
TRAF3-206ENST00000558880 GOLIM4O00461 696 aa8.81□□□□□ -1
TRAF3-206ENST00000558880 SCNN1DP51172 638 aa8.81□□□□□ -1
TRAF3-206ENST00000558880 SOX10P56693 466 aa8.81□□□□□ -1
TRAF3-206ENST00000558880 FKBP1AP62942 108 aaKnown RBP8.81□□□□□ -1
TRAF3-206ENST00000558880 DGKZQ13574 1117 aa8.81□□□□□ -1
TRAF3-206ENST00000558880 BMP2KLQ5H9B9 411 aa8.81□□□□□ -1
TRAF3-206ENST00000558880 TTLL5Q6EMB2 1281 aa8.81□□□□□ -1
TRAF3-206ENST00000558880 CYP4F22Q6NT55 531 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms