RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 CHMP4CQ96CF2 233 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 ZNF274Q96GC6 653 aaPredicted RBP13.19□□□□□ -0.3
HMG20A-206ENST00000558845 TDRD3Q9H7E2 651 aaKnown RBP13.19□□□□□ -0.3
HMG20A-206ENST00000558845 RNF181Q9P0P0 153 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 ZNF70Q9UC06 446 aaPredicted RBP13.19□□□□□ -0.3
HMG20A-206ENST00000558845 SWAP70Q9UH65 585 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 ANGEL1Q9UNK9 670 aaKnown RBP13.19□□□□□ -0.3
HMG20A-206ENST00000558845 PCDHAC2Q9Y5I4 1007 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 PLIN4Q96Q06 1357 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 SH2B2O14492 632 aaPredicted RBP13.18□□□□□ -0.3
HMG20A-206ENST00000558845 KDM4AO75164 1064 aa13.18□□□□□ -0.3
HMG20A-206ENST00000558845 HLA-DOAP06340 250 aa13.18□□□□□ -0.3
HMG20A-206ENST00000558845 SART3Q15020 963 aaKnown RBP13.18□□□□□ -0.3
HMG20A-206ENST00000558845 CCDC178Q5BJE1 867 aa13.18□□□□□ -0.3
HMG20A-206ENST00000558845 C9orf131Q5VYM1 1079 aa13.18□□□□□ -0.3
HMG20A-206ENST00000558845 CYB5R4Q7L1T6 521 aa13.18□□□□□ -0.3
HMG20A-206ENST00000558845 MICALL2Q8IY33 904 aa13.18□□□□□ -0.3
HMG20A-206ENST00000558845 IGDCC4Q8TDY8 1250 aa13.18□□□□□ -0.3
HMG20A-206ENST00000558845 FAM151AQ8WW52 585 aa13.18□□□□□ -0.3
HMG20A-206ENST00000558845 TCP11L1Q9NUJ3 509 aa13.18□□□□□ -0.3
HMG20A-206ENST00000558845 GPRC5DQ9NZD1 345 aa13.18□□□□□ -0.3
HMG20A-206ENST00000558845 PI4KBQ9UBF8 816 aa13.18□□□□□ -0.3
HMG20A-206ENST00000558845 CNOT7Q9UIV1 285 aaKnown RBP13.18□□□□□ -0.3
HMG20A-206ENST00000558845 TPCN1Q9ULQ1 816 aa13.18□□□□□ -0.3
HMG20A-206ENST00000558845 NID2Q14112 1375 aa13.18□□□□□ -0.3
HMG20A-206ENST00000558845 H7C1D1 291 aa13.17□□□□□ -0.3
HMG20A-206ENST00000558845 SMIM22K7EJ46 135 aa13.17□□□□□ -0.3
HMG20A-206ENST00000558845 DDIT3P35638 169 aa13.17□□□□□ -0.3
HMG20A-206ENST00000558845 PICALMQ13492 652 aa13.17□□□□□ -0.3
HMG20A-206ENST00000558845 GPR162Q16538 588 aa13.17□□□□□ -0.3
HMG20A-206ENST00000558845 IQCA1Q86XH1 822 aa13.17□□□□□ -0.3
HMG20A-206ENST00000558845 FOXP4Q8IVH2 680 aaPredicted RBP13.17□□□□□ -0.3
HMG20A-206ENST00000558845 BRF1Q92994 677 aa13.17□□□□□ -0.3
HMG20A-206ENST00000558845 L3MBTL3Q96JM7 780 aaPredicted RBP13.17□□□□□ -0.3
HMG20A-206ENST00000558845 TCEANC2Q96MN5 208 aa13.17□□□□□ -0.3
HMG20A-206ENST00000558845 CWC22Q9HCG8 908 aaKnown RBP13.17□□□□□ -0.3
HMG20A-206ENST00000558845 SAP30BPQ9UHR5 308 aaKnown RBP13.17□□□□□ -0.3
HMG20A-206ENST00000558845 SERPINB13Q9UIV8 391 aa13.17□□□□□ -0.3
HMG20A-206ENST00000558845 RASA1P20936 1047 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 NOVP48745 357 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 CDK8P49336 464 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 FGD1P98174 961 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 TNFAIP1Q13829 316 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 SEC23AQ15436 765 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 ME3Q16798 604 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 NKX2-3Q8TAU0 364 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 ANKS1AQ92625 1134 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 LY9Q9HBG7 655 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 INCENPQ9NQS7 918 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 GJA3Q9Y6H8 435 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 CNTNAP1P78357 1384 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 SIPA1L1O43166 1804 aa13.16□□□□□ -0.3
HMG20A-206ENST00000558845 ERICH2A1L162 156 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 TBC1D12O60347 775 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 PFKFB2O60825 505 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 SLC4A3P48751 1232 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 TNNI2P48788 182 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 MAP3K10Q02779 954 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 KIF4BQ2VIQ3 1234 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 SH3BP5LQ7L8J4 393 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 NEDD1Q8NHV4 660 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 DYNLL2Q96FJ2 89 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 CCDC17Q96LX7 622 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 ZSCAN10Q96SZ4 725 aaPredicted RBP13.15□□□□□ -0.3
HMG20A-206ENST00000558845 UBAC1Q9BSL1 405 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 MKNK2Q9HBH9 465 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 TOMM22Q9NS69 142 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 PGAP2Q9UHJ9 254 aa13.15□□□□□ -0.3
HMG20A-206ENST00000558845 HERC5Q9UII4 1024 aaKnown RBP13.15□□□□□ -0.3
HMG20A-206ENST00000558845 CIZ1Q9ULV3 898 aaPredicted RBP13.15□□□□□ -0.3
HMG20A-206ENST00000558845 SHTN1A0MZ66 631 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 DDTLA6NHG4 134 aaPredicted RBP13.14□□□□□ -0.31
HMG20A-206ENST00000558845 IFIT3O14879 490 aaKnown RBP13.14□□□□□ -0.31
HMG20A-206ENST00000558845 RANBP6O60518 1105 aaKnown RBP13.14□□□□□ -0.31
HMG20A-206ENST00000558845 LARGE1O95461 756 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 PDIA3P30101 505 aaKnown RBP13.14□□□□□ -0.31
HMG20A-206ENST00000558845 CACNB3P54284 484 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 ST3GAL1Q11201 340 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 WTAPQ15007 396 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 PPP2R5BQ15173 497 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 NBPF9Q3BBW0 867 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 RRP12Q5JTH9 1297 aaKnown RBP13.14□□□□□ -0.31
HMG20A-206ENST00000558845 PPP4R3BQ5MIZ7 849 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 TATDN1Q6P1N9 297 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 CHST3Q7LGC8 479 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 DGKHQ86XP1 1220 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 ZFPM1Q8IX07 1006 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 ZNF444Q8N0Y2 327 aaPredicted RBP13.14□□□□□ -0.31
HMG20A-206ENST00000558845 GTF3C6Q969F1 213 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 LLPHQ9BRT6 129 aaKnown RBP13.14□□□□□ -0.31
HMG20A-206ENST00000558845 LRRC2Q9BYS8 371 aa13.14□□□□□ -0.31
HMG20A-206ENST00000558845 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.14□□□□□ -0.31
HMG20A-206ENST00000558845 TNKSO95271 1327 aa13.13□□□□□ -0.31
HMG20A-206ENST00000558845 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
HMG20A-206ENST00000558845 GREB1LQ9C091 1923 aaPredicted RBP13.13□□□□□ -0.31
HMG20A-206ENST00000558845 CLRN2A0PK11 232 aa13.13□□□□□ -0.31
HMG20A-206ENST00000558845 TSPY2A6NKD2 308 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms