RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 CHMP3Q9Y3E7 222 aa12.27□□□□□ -0.45
SPG11-212ENST00000558790 IL16Q14005 1332 aa12.27□□□□□ -0.45
SPG11-212ENST00000558790 MYO1BO43795 1136 aa12.26□□□□□ -0.45
SPG11-212ENST00000558790 PPP1R12BO60237 982 aaPredicted RBP12.26□□□□□ -0.45
SPG11-212ENST00000558790 FOXO4P98177 505 aa12.26□□□□□ -0.45
SPG11-212ENST00000558790 IFIT5Q13325 482 aaKnown RBP12.26□□□□□ -0.45
SPG11-212ENST00000558790 ARMC5Q96C12 935 aa12.26□□□□□ -0.45
SPG11-212ENST00000558790 SLC10A4Q96EP9 437 aa12.26□□□□□ -0.45
SPG11-212ENST00000558790 PRMT6Q96LA8 375 aaPredicted RBP12.26□□□□□ -0.45
SPG11-212ENST00000558790 OCSTAMPQ9BR26 566 aa12.26□□□□□ -0.45
SPG11-212ENST00000558790 PTPN22Q9Y2R2 807 aa12.26□□□□□ -0.45
SPG11-212ENST00000558790 F6X3S4 739 aa12.25□□□□□ -0.45
SPG11-212ENST00000558790 FKBP1AP62942 108 aaKnown RBP12.25□□□□□ -0.45
SPG11-212ENST00000558790 SH3BP2P78314 561 aa12.25□□□□□ -0.45
SPG11-212ENST00000558790 CRHR2Q13324 411 aa12.25□□□□□ -0.45
SPG11-212ENST00000558790 EPHA10Q5JZY3 1008 aa12.25□□□□□ -0.45
SPG11-212ENST00000558790 NBPF12Q5TAG4 269 aaPredicted RBP12.25□□□□□ -0.45
SPG11-212ENST00000558790 PDXDC2PQ6P474 469 aa12.25□□□□□ -0.45
SPG11-212ENST00000558790 GPKOWQ92917 476 aaPredicted RBP eCLIP12.25□□□□□ -0.45
SPG11-212ENST00000558790 MAGEB6P1A0A0J9YX57 407 aa12.24□□□□□ -0.45
SPG11-212ENST00000558790 ZBBXA8MT70 800 aa12.24□□□□□ -0.45
SPG11-212ENST00000558790 MGAMO43451 1857 aa12.24□□□□□ -0.45
SPG11-212ENST00000558790 MYCP01106 439 aaPredicted RBP12.24□□□□□ -0.45
SPG11-212ENST00000558790 SLC19A1P41440 591 aa12.24□□□□□ -0.45
SPG11-212ENST00000558790 INHBEP58166 350 aa12.24□□□□□ -0.45
SPG11-212ENST00000558790 SKOR1P84550 965 aa12.24□□□□□ -0.45
SPG11-212ENST00000558790 AGERQ15109 404 aa12.24□□□□□ -0.45
SPG11-212ENST00000558790 CD99L2Q8TCZ2 262 aa12.24□□□□□ -0.45
SPG11-212ENST00000558790 ZNF594Q96JF6 807 aaPredicted RBP12.24□□□□□ -0.45
SPG11-212ENST00000558790 ARHGAP9Q9BRR9 750 aa12.24□□□□□ -0.45
SPG11-212ENST00000558790 UNCXA6NJT0 531 aa12.23□□□□□ -0.45
SPG11-212ENST00000558790 USP2O75604 605 aaPredicted RBP12.23□□□□□ -0.45
SPG11-212ENST00000558790 IREB2P48200 963 aaKnown RBP12.23□□□□□ -0.45
SPG11-212ENST00000558790 RPIAP49247 311 aa12.23□□□□□ -0.45
SPG11-212ENST00000558790 RBM5P52756 815 aaKnown RBP eCLIP12.23□□□□□ -0.45
SPG11-212ENST00000558790 NR1H3Q13133 447 aa12.23□□□□□ -0.45
SPG11-212ENST00000558790 RASA3Q14644 834 aa12.23□□□□□ -0.45
SPG11-212ENST00000558790 SUPT20HL1Q3ZLR7 823 aa12.23□□□□□ -0.45
SPG11-212ENST00000558790 BEND3Q5T5X7 828 aa12.23□□□□□ -0.45
SPG11-212ENST00000558790 LMBR1LQ6UX01 489 aa12.23□□□□□ -0.45
SPG11-212ENST00000558790 SH3BP5LQ7L8J4 393 aa12.23□□□□□ -0.45
SPG11-212ENST00000558790 ERO1AQ96HE7 468 aa12.23□□□□□ -0.45
SPG11-212ENST00000558790 ZNF333Q96JL9 665 aa12.23□□□□□ -0.45
SPG11-212ENST00000558790 PTPN18Q99952 460 aa12.23□□□□□ -0.45
SPG11-212ENST00000558790 DOCK2Q92608 1830 aa12.23□□□□□ -0.45
SPG11-212ENST00000558790 FAM205AQ6ZU69 1335 aa12.22□□□□□ -0.45
SPG11-212ENST00000558790 PTPRFP10586 1907 aa12.22□□□□□ -0.45
SPG11-212ENST00000558790 PLIN1O60240 522 aa12.22□□□□□ -0.45
SPG11-212ENST00000558790 VAMP4O75379 141 aa12.22□□□□□ -0.45
SPG11-212ENST00000558790 PTK2Q05397 1052 aa12.22□□□□□ -0.45
SPG11-212ENST00000558790 C4orf48Q5BLP8 95 aa12.22□□□□□ -0.45
SPG11-212ENST00000558790 TAF7LQ5H9L4 462 aa12.22□□□□□ -0.45
SPG11-212ENST00000558790 MFSD14BQ5SR56 506 aa12.22□□□□□ -0.45
SPG11-212ENST00000558790 ANKRD13AQ8IZ07 590 aa12.22□□□□□ -0.45
SPG11-212ENST00000558790 OPTNQ96CV9 577 aa12.22□□□□□ -0.45
SPG11-212ENST00000558790 ELP3Q9H9T3 547 aa12.22□□□□□ -0.45
SPG11-212ENST00000558790 ALPK3Q96L96 1907 aa12.21□□□□□ -0.45
SPG11-212ENST00000558790 GRM8O00222 908 aa12.21□□□□□ -0.45
SPG11-212ENST00000558790 EXOSC9Q06265 439 aaKnown RBP12.21□□□□□ -0.45
SPG11-212ENST00000558790 TNFAIP1Q13829 316 aa12.21□□□□□ -0.45
SPG11-212ENST00000558790 CCDC57Q2TAC2 916 aa12.21□□□□□ -0.45
SPG11-212ENST00000558790 OTUD7BQ6GQQ9 843 aa12.21□□□□□ -0.45
SPG11-212ENST00000558790 LDHAL6AQ6ZMR3 332 aa12.21□□□□□ -0.45
SPG11-212ENST00000558790 Q7L0L9 218 aa12.21□□□□□ -0.45
SPG11-212ENST00000558790 TEPSINQ96N21 525 aa12.21□□□□□ -0.45
SPG11-212ENST00000558790 C1orf115Q9H7X2 142 aa12.21□□□□□ -0.45
SPG11-212ENST00000558790 CNNM1Q9NRU3 951 aa12.21□□□□□ -0.45
SPG11-212ENST00000558790 ZNF70Q9UC06 446 aaPredicted RBP12.21□□□□□ -0.45
SPG11-212ENST00000558790 SERPINA10Q9UK55 444 aa12.21□□□□□ -0.45
SPG11-212ENST00000558790 TTF2Q9UNY4 1162 aaKnown RBP12.21□□□□□ -0.45
SPG11-212ENST00000558790 CD2BP2O95400 341 aaKnown RBP12.2□□□□□ -0.46
SPG11-212ENST00000558790 GYG1P46976 350 aa12.2□□□□□ -0.46
SPG11-212ENST00000558790 SP3Q02447 781 aa12.2□□□□□ -0.46
SPG11-212ENST00000558790 VGLL4Q14135 290 aa12.2□□□□□ -0.46
SPG11-212ENST00000558790 SH3RF1Q7Z6J0 888 aa12.2□□□□□ -0.46
SPG11-212ENST00000558790 TDRD7Q8NHU6 1098 aaKnown RBP12.2□□□□□ -0.46
SPG11-212ENST00000558790 ADAM32Q8TC27 787 aa12.2□□□□□ -0.46
SPG11-212ENST00000558790 PRKD2Q9BZL6 878 aa12.2□□□□□ -0.46
SPG11-212ENST00000558790 TDRD3Q9H7E2 651 aaKnown RBP12.2□□□□□ -0.46
SPG11-212ENST00000558790 EFCC1Q9HA90 598 aa12.2□□□□□ -0.46
SPG11-212ENST00000558790 RAPGEFL1Q9UHV5 662 aa12.2□□□□□ -0.46
SPG11-212ENST00000558790 TTC28Q96AY4 2481 aa12.2□□□□□ -0.46
SPG11-212ENST00000558790 TCP10L2B9ZVM9 353 aa12.19□□□□□ -0.46
SPG11-212ENST00000558790 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.19□□□□□ -0.46
SPG11-212ENST00000558790 ZBTB33Q86T24 672 aa12.19□□□□□ -0.46
SPG11-212ENST00000558790 BPHLQ86WA6 291 aaPredicted RBP12.19□□□□□ -0.46
SPG11-212ENST00000558790 DZIP1LQ8IYY4 767 aaKnown RBP12.19□□□□□ -0.46
SPG11-212ENST00000558790 ADAMTS19Q8TE59 1207 aa12.19□□□□□ -0.46
SPG11-212ENST00000558790 BRI3BPQ8WY22 251 aa12.19□□□□□ -0.46
SPG11-212ENST00000558790 PUS3Q9BZE2 481 aaKnown RBP12.19□□□□□ -0.46
SPG11-212ENST00000558790 TMEM39BQ9GZU3 492 aa12.19□□□□□ -0.46
SPG11-212ENST00000558790 MYH2Q9UKX2 1941 aa12.19□□□□□ -0.46
SPG11-212ENST00000558790 HIBADHP31937 336 aaKnown RBP12.18□□□□□ -0.46
SPG11-212ENST00000558790 CRKP46108 304 aa12.18□□□□□ -0.46
SPG11-212ENST00000558790 UBE4AQ14139 1066 aa12.18□□□□□ -0.46
SPG11-212ENST00000558790 GRIK5Q16478 980 aa12.18□□□□□ -0.46
SPG11-212ENST00000558790 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.18□□□□□ -0.46
SPG11-212ENST00000558790 DPF3Q92784 378 aa12.18□□□□□ -0.46
SPG11-212ENST00000558790 SHISA4Q96DD7 197 aa12.18□□□□□ -0.46
SPG11-212ENST00000558790 FAM84BQ96KN1 310 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms