RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 CRACR2BQ8N4Y2 399 aaPredicted RBP18.62■□□□□ 0.57
RPL28-206ENST00000558752 LRCH3Q96II8 777 aa18.62■□□□□ 0.57
RPL28-206ENST00000558752 WDR18Q9BV38 432 aa18.62■□□□□ 0.57
RPL28-206ENST00000558752 ASCC2Q9H1I8 757 aaPredicted RBP18.62■□□□□ 0.57
RPL28-206ENST00000558752 RAB11FIP3O75154 756 aa18.61■□□□□ 0.57
RPL28-206ENST00000558752 BACE1P56817 501 aa18.61■□□□□ 0.57
RPL28-206ENST00000558752 CCAR1Q8IX12 1150 aaKnown RBP18.61■□□□□ 0.57
RPL28-206ENST00000558752 TRMT44Q8IYL2 757 aaKnown RBP18.61■□□□□ 0.57
RPL28-206ENST00000558752 ZNF384Q8TF68 577 aa18.61■□□□□ 0.57
RPL28-206ENST00000558752 GTF3C2Q8WUA4 911 aaPredicted RBP18.61■□□□□ 0.57
RPL28-206ENST00000558752 PAWRQ96IZ0 340 aaKnown RBP18.61■□□□□ 0.57
RPL28-206ENST00000558752 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.61■□□□□ 0.57
RPL28-206ENST00000558752 MCAMP43121 646 aa18.6■□□□□ 0.57
RPL28-206ENST00000558752 PI16Q6UXB8 463 aa18.6■□□□□ 0.57
RPL28-206ENST00000558752 CERS3Q8IU89 383 aa18.6■□□□□ 0.57
RPL28-206ENST00000558752 AATFQ9NY61 560 aaKnown RBP eCLIP18.6■□□□□ 0.57
RPL28-206ENST00000558752 MORF4L1Q9UBU8 362 aa18.6■□□□□ 0.57
RPL28-206ENST00000558752 HLA-DOAP06340 250 aa18.59■□□□□ 0.57
RPL28-206ENST00000558752 HOXA7P31268 230 aaPredicted RBP18.59■□□□□ 0.57
RPL28-206ENST00000558752 PPP4CP60510 307 aa18.59■□□□□ 0.57
RPL28-206ENST00000558752 GPRC5AQ8NFJ5 357 aa18.59■□□□□ 0.57
RPL28-206ENST00000558752 SH3RF3Q8TEJ3 882 aaPredicted RBP18.59■□□□□ 0.57
RPL28-206ENST00000558752 SOCS4Q8WXH5 440 aa18.59■□□□□ 0.57
RPL28-206ENST00000558752 NUDT12Q9BQG2 462 aa18.59■□□□□ 0.57
RPL28-206ENST00000558752 NBPF3Q9H094 633 aa18.59■□□□□ 0.57
RPL28-206ENST00000558752 COL6A3P12111 3177 aa18.59■□□□□ 0.57
RPL28-206ENST00000558752 DOCK3Q8IZD9 2030 aa18.59■□□□□ 0.57
RPL28-206ENST00000558752 LOC285556D6RIA3 1793 aa18.58■□□□□ 0.57
RPL28-206ENST00000558752 LAMA3Q16787 3333 aa18.58■□□□□ 0.57
RPL28-206ENST00000558752 USP17L10C9JJH3 530 aa18.58■□□□□ 0.56
RPL28-206ENST00000558752 MTMR2Q13614 643 aa18.58■□□□□ 0.56
RPL28-206ENST00000558752 EAF2Q96CJ1 260 aaPredicted RBP18.58■□□□□ 0.56
RPL28-206ENST00000558752 KIF1BPQ96EK5 621 aa18.58■□□□□ 0.56
RPL28-206ENST00000558752 DBNDD2Q9BQY9 259 aa18.58■□□□□ 0.56
RPL28-206ENST00000558752 GJD2Q9UKL4 321 aa18.58■□□□□ 0.56
RPL28-206ENST00000558752 A0A0C4DFX4 3053 aa18.58■□□□□ 0.56
RPL28-206ENST00000558752 ATAD5Q96QE3 1844 aa18.58■□□□□ 0.56
RPL28-206ENST00000558752 XRCC5P13010 732 aaKnown RBP18.57■□□□□ 0.56
RPL28-206ENST00000558752 MAPK4P31152 587 aa18.57■□□□□ 0.56
RPL28-206ENST00000558752 TMED8Q6PL24 325 aaPredicted RBP18.57■□□□□ 0.56
RPL28-206ENST00000558752 CLASRPQ8N2M8 674 aaKnown RBP18.57■□□□□ 0.56
RPL28-206ENST00000558752 RHPN1Q8TCX5 695 aa18.57■□□□□ 0.56
RPL28-206ENST00000558752 TGFBRAP1Q8WUH2 860 aa18.57■□□□□ 0.56
RPL28-206ENST00000558752 CWC22Q9HCG8 908 aaKnown RBP18.57■□□□□ 0.56
RPL28-206ENST00000558752 STAP2Q9UGK3 403 aa18.57■□□□□ 0.56
RPL28-206ENST00000558752 EXOC6BQ9Y2D4 811 aa18.57■□□□□ 0.56
RPL28-206ENST00000558752 BMP8BP34820 402 aa18.56■□□□□ 0.56
RPL28-206ENST00000558752 C20orf194Q5TEA3 1177 aa18.56■□□□□ 0.56
RPL28-206ENST00000558752 MAPKAPK5Q8IW41 473 aa18.56■□□□□ 0.56
RPL28-206ENST00000558752 SIRT2Q8IXJ6 389 aa18.56■□□□□ 0.56
RPL28-206ENST00000558752 P2RX7Q99572 595 aaKnown RBP18.56■□□□□ 0.56
RPL28-206ENST00000558752 CCDC8Q9H0W5 538 aaPredicted RBP18.56■□□□□ 0.56
RPL28-206ENST00000558752 FLT1P17948 1338 aa18.55■□□□□ 0.56
RPL28-206ENST00000558752 CYP2B6P20813 491 aa18.55■□□□□ 0.56
RPL28-206ENST00000558752 HERVK_113P62684 666 aa18.55■□□□□ 0.56
RPL28-206ENST00000558752 METTL16Q86W50 562 aaKnown RBP18.55■□□□□ 0.56
RPL28-206ENST00000558752 C11orf49Q9H6J7 331 aa18.55■□□□□ 0.56
RPL28-206ENST00000558752 SNRKQ9NRH2 765 aa18.55■□□□□ 0.56
RPL28-206ENST00000558752 DBNLQ9UJU6 430 aaKnown RBP18.55■□□□□ 0.56
RPL28-206ENST00000558752 GLRX3O76003 335 aaKnown RBP18.54■□□□□ 0.56
RPL28-206ENST00000558752 RGS2P41220 211 aa18.54■□□□□ 0.56
RPL28-206ENST00000558752 RRP1BQ14684 758 aaKnown RBP18.54■□□□□ 0.56
RPL28-206ENST00000558752 USP17L2Q6R6M4 530 aa18.54■□□□□ 0.56
RPL28-206ENST00000558752 AACSQ86V21 672 aa18.54■□□□□ 0.56
RPL28-206ENST00000558752 C7orf61Q8IZ16 206 aa18.54■□□□□ 0.56
RPL28-206ENST00000558752 OGDHLQ9ULD0 1010 aa18.54■□□□□ 0.56
RPL28-206ENST00000558752 PRKAR2AP13861 404 aaKnown RBP18.53■□□□□ 0.56
RPL28-206ENST00000558752 ZKSCAN1P17029 563 aaPredicted RBP18.53■□□□□ 0.56
RPL28-206ENST00000558752 CCNA1P78396 465 aa18.53■□□□□ 0.56
RPL28-206ENST00000558752 GPR153Q6NV75 609 aa18.53■□□□□ 0.56
RPL28-206ENST00000558752 DIS3LQ8TF46 1054 aaKnown RBP18.53■□□□□ 0.56
RPL28-206ENST00000558752 TRIB2Q92519 343 aa18.53■□□□□ 0.56
RPL28-206ENST00000558752 PALD1Q9ULE6 856 aa18.53■□□□□ 0.56
RPL28-206ENST00000558752 ZBTB21Q9ULJ3 1066 aa18.53■□□□□ 0.56
RPL28-206ENST00000558752 MAST2Q6P0Q8 1798 aa18.53■□□□□ 0.56
RPL28-206ENST00000558752 CYP2E1P05181 493 aaPredicted RBP18.52■□□□□ 0.56
RPL28-206ENST00000558752 IFIT2P09913 472 aaKnown RBP18.52■□□□□ 0.56
RPL28-206ENST00000558752 USP14P54578 494 aa18.52■□□□□ 0.56
RPL28-206ENST00000558752 ERVK-9P63128 1117 aa18.52■□□□□ 0.56
RPL28-206ENST00000558752 ERVK-24P63145 666 aa18.52■□□□□ 0.56
RPL28-206ENST00000558752 MAP3K21Q5TCX8 1036 aa18.52■□□□□ 0.56
RPL28-206ENST00000558752 GDF15Q99988 308 aa18.52■□□□□ 0.56
RPL28-206ENST00000558752 GDF11O95390 407 aa18.51■□□□□ 0.55
RPL28-206ENST00000558752 USP5P45974 858 aa18.51■□□□□ 0.55
RPL28-206ENST00000558752 PLEKHH3Q7Z736 793 aa18.51■□□□□ 0.55
RPL28-206ENST00000558752 TTC6Q86TZ1 520 aa18.51■□□□□ 0.55
RPL28-206ENST00000558752 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.51■□□□□ 0.55
RPL28-206ENST00000558752 CYP7A1P22680 504 aa18.5■□□□□ 0.55
RPL28-206ENST00000558752 ZAP70P43403 619 aa18.5■□□□□ 0.55
RPL28-206ENST00000558752 RRP1P56182 461 aaKnown RBP18.5■□□□□ 0.55
RPL28-206ENST00000558752 TRIM32Q13049 653 aa18.5■□□□□ 0.55
RPL28-206ENST00000558752 TTF1Q15361 905 aaPredicted RBP18.5■□□□□ 0.55
RPL28-206ENST00000558752 Q7L0L9 218 aa18.5■□□□□ 0.55
RPL28-206ENST00000558752 GPR142Q7Z601 462 aa18.5■□□□□ 0.55
RPL28-206ENST00000558752 YTHDC1Q96MU7 727 aaKnown RBP18.5■□□□□ 0.55
RPL28-206ENST00000558752 FEZ1Q99689 392 aa18.5■□□□□ 0.55
RPL28-206ENST00000558752 PAGR1Q9BTK6 254 aa18.5■□□□□ 0.55
RPL28-206ENST00000558752 DNAJC18Q9H819 358 aa18.5■□□□□ 0.55
RPL28-206ENST00000558752 IL1RAPL2Q9NP60 686 aa18.5■□□□□ 0.55
RPL28-206ENST00000558752 CABP5Q9NP86 173 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms